RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 SLC35F2Q8IXU6 374 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 CCDC71LQ8N9Z2 235 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 DRAXINQ8NBI3 349 aaPredicted RBP2.81□□□□□ -1.96
VPS50-214ENST00000477935 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.81□□□□□ -1.96
VPS50-214ENST00000477935 ZNF502Q8TBZ5 544 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 PTX4Q96A99 478 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 ABHD14BQ96IU4 210 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 C4orf36Q96KX1 117 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 GORASP2Q9H8Y8 452 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 ZNF331Q9NQX6 463 aaPredicted RBP2.81□□□□□ -1.96
VPS50-214ENST00000477935 CLN6Q9NWW5 311 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 CMTM6Q9NX76 183 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 NKIRAS1Q9NYS0 192 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 IGKV3-7A0A075B6H7 116 aa2.8□□□□□ -1.96
VPS50-214ENST00000477935 IGLV11-55A0A075B6I3 123 aa2.8□□□□□ -1.96
VPS50-214ENST00000477935 F5H768 121 aa2.8□□□□□ -1.96
VPS50-214ENST00000477935 MAGEB4O15481 346 aaPredicted RBP2.8□□□□□ -1.96
VPS50-214ENST00000477935 EIF4EP06730 217 aaKnown RBP2.8□□□□□ -1.96
VPS50-214ENST00000477935 RAB3AP20336 220 aa2.8□□□□□ -1.96
VPS50-214ENST00000477935 MAS1LP35410 378 aa2.8□□□□□ -1.96
VPS50-214ENST00000477935 OR2B8PP59922 312 aa2.8□□□□□ -1.96
VPS50-214ENST00000477935 KRTAP10-4P60372 401 aaPredicted RBP2.8□□□□□ -1.96
VPS50-214ENST00000477935 GK3PQ14409 553 aa2.8□□□□□ -1.96
VPS50-214ENST00000477935 SSX1Q16384 188 aa2.8□□□□□ -1.96
VPS50-214ENST00000477935 ACOT6Q3I5F7 207 aaPredicted RBP2.8□□□□□ -1.96
VPS50-214ENST00000477935 TNFAIP8L3Q5GJ75 292 aa2.8□□□□□ -1.96
VPS50-214ENST00000477935 OR51A2Q8NGJ7 313 aa2.8□□□□□ -1.96
VPS50-214ENST00000477935 OR10K1Q8NGX5 313 aa2.8□□□□□ -1.96
VPS50-214ENST00000477935 PINX1Q96BK5 328 aaKnown RBP2.8□□□□□ -1.96
VPS50-214ENST00000477935 DGCR14Q96DF8 476 aaKnown RBP2.8□□□□□ -1.96
VPS50-214ENST00000477935 TXN2Q99757 166 aa2.8□□□□□ -1.96
VPS50-214ENST00000477935 KCTD14Q9BQ13 255 aaPredicted RBP2.8□□□□□ -1.96
VPS50-214ENST00000477935 SIKE1Q9BRV8 207 aa2.8□□□□□ -1.96
VPS50-214ENST00000477935 TTTY10Q9BZA0 68 aa2.8□□□□□ -1.96
VPS50-214ENST00000477935 SLC25A39Q9BZJ4 359 aaPredicted RBP2.8□□□□□ -1.96
VPS50-214ENST00000477935 MS4A6AQ9H2W1 248 aa2.8□□□□□ -1.96
VPS50-214ENST00000477935 ZNF430Q9H8G1 570 aaPredicted RBP2.8□□□□□ -1.96
VPS50-214ENST00000477935 MRPS16Q9Y3D3 137 aaKnown RBP2.8□□□□□ -1.96
VPS50-214ENST00000477935 PEX16Q9Y5Y5 336 aa2.8□□□□□ -1.96
VPS50-214ENST00000477935 IGHV1OR15-1A0A075B7D0 117 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 LYRM9A8MSI8 78 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 GABRPO00591 440 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 CDRT1O95170 752 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 HBE1P02100 147 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 ATP5G1P05496 136 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 CEACAM6P40199 344 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 ATP5G3P48201 142 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 CDK5Q00535 292 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 DAZ2Q13117 558 aaKnown RBP2.79□□□□□ -1.96
VPS50-214ENST00000477935 CDK10Q15131 360 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 HMGN3Q15651 99 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 ACTL10Q5JWF8 245 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 OGFRL1Q5TC84 451 aaPredicted RBP2.79□□□□□ -1.96
VPS50-214ENST00000477935 ZNF773Q6PK81 442 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 Q6ZRU5 148 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 Q6ZSA8 131 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 TCF24Q7RTU0 167 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 FAM220AQ7Z4H9 259 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 OR2G2Q8NGZ5 317 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 OR10AC1Q8NH08 325 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 VSTM2AQ8TAG5 236 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 IL1F10Q8WWZ1 152 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 ADTRPQ96IZ2 230 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 SLC35E1Q96K37 410 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 OR10C1Q96KK4 312 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 FAM192AQ9GZU8 254 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 PPDPFQ9H3Y8 114 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 DAZ3Q9NR90 486 aaKnown RBP2.79□□□□□ -1.96
VPS50-214ENST00000477935 XCL2Q9UBD3 114 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 SAMHD1Q9Y3Z3 626 aaKnown RBP2.79□□□□□ -1.96
VPS50-214ENST00000477935 YTHDF2Q9Y5A9 579 aaKnown RBP2.79□□□□□ -1.96
VPS50-214ENST00000477935 S4R3C0 116 aa2.79□□□□□ -1.96
VPS50-214ENST00000477935 CCDC182A6NF36 153 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 OR2T8A6NH00 312 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 H3BNG1 76 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 M0R1X1 148 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 NME4O00746 187 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 SIVA1O15304 175 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 ZNF207O43670 478 aaKnown RBP2.78□□□□□ -1.96
VPS50-214ENST00000477935 B3GALNT1O75752 331 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 IGHV3-48P01763 117 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 ZNF735P0CB33 412 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 SERPINA2P20848 420 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 RPL27AP46776 148 aaKnown RBP2.78□□□□□ -1.96
VPS50-214ENST00000477935 PSMD7P51665 324 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 MNAT1P51948 309 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 ESRGQ1W209 222 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 RRN3P1Q2M238 152 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 KCTD21Q4G0X4 260 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 OR10K2Q6IF99 312 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 CBR4Q8N4T8 237 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 MRPL30Q8TCC3 161 aaKnown RBP2.78□□□□□ -1.96
VPS50-214ENST00000477935 C7orf33Q8WU49 177 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 DYDC1Q8WWB3 177 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 IL22RA2Q969J5 263 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 TMEM101Q96IK0 257 aa2.78□□□□□ -1.96
VPS50-214ENST00000477935 C16orf45Q96MC5 204 aaPredicted RBP2.78□□□□□ -1.96
VPS50-214ENST00000477935 MYCBPQ99417 103 aaPredicted RBP2.78□□□□□ -1.96
VPS50-214ENST00000477935 GINS3Q9BRX5 216 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms