RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 IAPPP10997 89 aa15.99■□□□□ 0.15
COL9A3-211ENST00000477612 EIF2B2P49770 351 aaKnown RBP15.99■□□□□ 0.15
COL9A3-211ENST00000477612 ID3Q02535 119 aa15.99■□□□□ 0.15
COL9A3-211ENST00000477612 DHRS2Q13268 280 aa15.99■□□□□ 0.15
COL9A3-211ENST00000477612 LYG2Q86SG7 212 aa15.99■□□□□ 0.15
COL9A3-211ENST00000477612 SLC35E1Q96K37 410 aa15.99■□□□□ 0.15
COL9A3-211ENST00000477612 RABAC1Q9UI14 185 aa15.99■□□□□ 0.15
COL9A3-211ENST00000477612 LCE6AA0A183 80 aa15.98■□□□□ 0.15
COL9A3-211ENST00000477612 MPTX1A8MV57 137 aa15.98■□□□□ 0.15
COL9A3-211ENST00000477612 PRSS46E5RG02 174 aa15.98■□□□□ 0.15
COL9A3-211ENST00000477612 ATF4P18848 351 aaPredicted RBP15.98■□□□□ 0.15
COL9A3-211ENST00000477612 RPP30P78346 268 aaKnown RBP15.98■□□□□ 0.15
COL9A3-211ENST00000477612 STXBP6Q8NFX7 210 aa15.98■□□□□ 0.15
COL9A3-211ENST00000477612 COQ8AQ8NI60 647 aa15.98■□□□□ 0.15
COL9A3-211ENST00000477612 PLA2G10O15496 165 aa15.97■□□□□ 0.15
COL9A3-211ENST00000477612 ADAP1O75689 374 aa15.97■□□□□ 0.15
COL9A3-211ENST00000477612 GATAD1Q8WUU5 269 aa15.97■□□□□ 0.15
COL9A3-211ENST00000477612 RNF125Q96EQ8 232 aa15.97■□□□□ 0.15
COL9A3-211ENST00000477612 SEPSECSQ9HD40 501 aaKnown RBP15.97■□□□□ 0.15
COL9A3-211ENST00000477612 LINC00854A0A1B0GVQ3 168 aa15.96■□□□□ 0.15
COL9A3-211ENST00000477612 ZFP92A6NM28 416 aa15.96■□□□□ 0.15
COL9A3-211ENST00000477612 WRBO00258 174 aa15.96■□□□□ 0.15
COL9A3-211ENST00000477612 LEMD1Q68G75 181 aa15.96■□□□□ 0.15
COL9A3-211ENST00000477612 OR8G2PQ6IF36 304 aa15.96■□□□□ 0.15
COL9A3-211ENST00000477612 LINC00299Q6ZSB3 139 aa15.96■□□□□ 0.15
COL9A3-211ENST00000477612 THAP8Q8NA92 274 aa15.96■□□□□ 0.15
COL9A3-211ENST00000477612 TRGV9Q99603 122 aa15.96■□□□□ 0.15
COL9A3-211ENST00000477612 MAGT1Q9H0U3 335 aa15.96■□□□□ 0.15
COL9A3-211ENST00000477612 A0A0J9YWU9 116 aa15.95■□□□□ 0.14
COL9A3-211ENST00000477612 ANXA7P20073 488 aaKnown RBP15.95■□□□□ 0.14
COL9A3-211ENST00000477612 ZNF90Q03938 601 aa15.95■□□□□ 0.14
COL9A3-211ENST00000477612 OR4D5Q8NGN0 318 aa15.95■□□□□ 0.14
COL9A3-211ENST00000477612 DNAH1Q9P2D7 4330 aa15.94■□□□□ 0.14
COL9A3-211ENST00000477612 IGKV1OR2-108A0A075B7D4 117 aa15.94■□□□□ 0.14
COL9A3-211ENST00000477612 FABP1P07148 127 aa15.94■□□□□ 0.14
COL9A3-211ENST00000477612 NUP62P37198 522 aaPredicted RBP15.94■□□□□ 0.14
COL9A3-211ENST00000477612 SNRPGP15A8MWD9 76 aa15.93■□□□□ 0.14
COL9A3-211ENST00000477612 IFNA21P01568 189 aa15.93■□□□□ 0.14
COL9A3-211ENST00000477612 ZNF688P0C7X2 276 aa15.93■□□□□ 0.14
COL9A3-211ENST00000477612 EWSR1Q01844 656 aaKnown RBP eCLIP15.93■□□□□ 0.14
COL9A3-211ENST00000477612 TRPT1Q86TN4 253 aaKnown RBP15.93■□□□□ 0.14
COL9A3-211ENST00000477612 STHQ8IWL8 128 aa15.93■□□□□ 0.14
COL9A3-211ENST00000477612 MITD1Q8WV92 249 aa15.93■□□□□ 0.14
COL9A3-211ENST00000477612 NRN1Q9NPD7 142 aa15.93■□□□□ 0.14
COL9A3-211ENST00000477612 PFDN2Q9UHV9 154 aa15.93■□□□□ 0.14
COL9A3-211ENST00000477612 LYRM1O43325 122 aa15.92■□□□□ 0.14
COL9A3-211ENST00000477612 NKX2-1P43699 371 aaPredicted RBP15.92■□□□□ 0.14
COL9A3-211ENST00000477612 C4orf46Q504U0 113 aa15.92■□□□□ 0.14
COL9A3-211ENST00000477612 SPANXN5Q5MJ07 72 aa15.92■□□□□ 0.14
COL9A3-211ENST00000477612 SIGLEC15Q6ZMC9 328 aa15.92■□□□□ 0.14
COL9A3-211ENST00000477612 STRAPQ9Y3F4 350 aaKnown RBP15.92■□□□□ 0.14
COL9A3-211ENST00000477612 CFDP00746 253 aaPredicted RBP15.91■□□□□ 0.14
COL9A3-211ENST00000477612 POLR2GP62487 172 aaKnown RBP eCLIP15.91■□□□□ 0.14
COL9A3-211ENST00000477612 C1orf194Q5T5A4 169 aa15.91■□□□□ 0.14
COL9A3-211ENST00000477612 RARRES2Q99969 163 aa15.91■□□□□ 0.14
COL9A3-211ENST00000477612 CCDC32Q9BV29 185 aa15.91■□□□□ 0.14
COL9A3-211ENST00000477612 PAIP2BQ9ULR5 123 aaKnown RBP15.91■□□□□ 0.14
COL9A3-211ENST00000477612 PMS2P5A8MQ11 134 aa15.9■□□□□ 0.14
COL9A3-211ENST00000477612 CA1P00915 261 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-211ENST00000477612 GIG44P09565 113 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-211ENST00000477612 TMEM41BQ5BJD5 291 aa15.9■□□□□ 0.14
COL9A3-211ENST00000477612 MORN3Q6PF18 240 aaPredicted RBP15.9■□□□□ 0.14
COL9A3-211ENST00000477612 TMEM217Q8N7C4 229 aa15.9■□□□□ 0.14
COL9A3-211ENST00000477612 SMIM8Q96KF7 97 aa15.9■□□□□ 0.14
COL9A3-211ENST00000477612 PBDC1Q9BVG4 233 aa15.9■□□□□ 0.14
COL9A3-211ENST00000477612 C20orf85Q9H1P6 137 aa15.9■□□□□ 0.14
COL9A3-211ENST00000477612 TCRBP04435 133 aa15.89■□□□□ 0.13
COL9A3-211ENST00000477612 SPP1P10451 314 aa15.89■□□□□ 0.13
COL9A3-211ENST00000477612 PAX9P55771 341 aa15.89■□□□□ 0.13
COL9A3-211ENST00000477612 RAB40CQ96S21 281 aa15.89■□□□□ 0.13
COL9A3-211ENST00000477612 PSENENQ9NZ42 101 aa15.89■□□□□ 0.13
COL9A3-211ENST00000477612 FBXL17Q9UF56 701 aa15.89■□□□□ 0.13
COL9A3-211ENST00000477612 HYDINQ4G0P3 5121 aa15.88■□□□□ 0.13
COL9A3-211ENST00000477612 KNCNA6PVL3 124 aa15.88■□□□□ 0.13
COL9A3-211ENST00000477612 H3BP45 60 aa15.88■□□□□ 0.13
COL9A3-211ENST00000477612 LYZP61626 148 aa15.88■□□□□ 0.13
COL9A3-211ENST00000477612 SNRPD3P62318 126 aaKnown RBP15.88■□□□□ 0.13
COL9A3-211ENST00000477612 TMEM144Q7Z5S9 345 aa15.88■□□□□ 0.13
COL9A3-211ENST00000477612 OR11H2Q8NH07 326 aa15.88■□□□□ 0.13
COL9A3-211ENST00000477612 SLC45A2Q9UMX9 530 aa15.88■□□□□ 0.13
COL9A3-211ENST00000477612 OR2F1Q13607 317 aa15.87■□□□□ 0.13
COL9A3-211ENST00000477612 IAH1Q2TAA2 248 aaPredicted RBP15.87■□□□□ 0.13
COL9A3-211ENST00000477612 PSMG4Q5JS54 123 aa15.87■□□□□ 0.13
COL9A3-211ENST00000477612 TMEM14EPQ6UXP3 125 aa15.87■□□□□ 0.13
COL9A3-211ENST00000477612 C11orf68Q9H3H3 251 aaKnown RBP15.87■□□□□ 0.13
COL9A3-211ENST00000477612 TAS2R30P59541 319 aa15.86■□□□□ 0.13
COL9A3-211ENST00000477612 ACTL10Q5JWF8 245 aa15.86■□□□□ 0.13
COL9A3-211ENST00000477612 ACOT7LQ6ZUV0 252 aa15.86■□□□□ 0.13
COL9A3-211ENST00000477612 ZBTB8BQ8NAP8 495 aaPredicted RBP15.86■□□□□ 0.13
COL9A3-211ENST00000477612 TMEM182Q6ZP80 229 aaPredicted RBP15.85■□□□□ 0.13
COL9A3-211ENST00000477612 NUPR2A6NF83 97 aa15.84■□□□□ 0.13
COL9A3-211ENST00000477612 A6NHS1 94 aa15.84■□□□□ 0.13
COL9A3-211ENST00000477612 FNDC10F2Z333 226 aa15.84■□□□□ 0.13
COL9A3-211ENST00000477612 SOCS3O14543 225 aa15.84■□□□□ 0.13
COL9A3-211ENST00000477612 SSSCA1O60232 199 aa15.84■□□□□ 0.13
COL9A3-211ENST00000477612 TSC22D2O75157 780 aa15.84■□□□□ 0.13
COL9A3-211ENST00000477612 JTBO76095 146 aa15.84■□□□□ 0.13
COL9A3-211ENST00000477612 CSNK1G2-AS1Q8NCQ2 148 aa15.84■□□□□ 0.13
COL9A3-211ENST00000477612 BPIFCQ8NFQ6 507 aa15.84■□□□□ 0.13
COL9A3-211ENST00000477612 S100ZQ8WXG8 99 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms