RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 MFAP2P55001 183 aa14.53□□□□□ -0.08
CCM2-209ENST00000477605 PLP1P60201 277 aa14.53□□□□□ -0.08
CCM2-209ENST00000477605 C18orf32Q8TCD1 76 aa14.53□□□□□ -0.08
CCM2-209ENST00000477605 RNASE6Q93091 150 aaKnown RBP14.53□□□□□ -0.08
CCM2-209ENST00000477605 ATG101Q9BSB4 218 aa14.53□□□□□ -0.08
CCM2-209ENST00000477605 NGBQ9NPG2 151 aa14.53□□□□□ -0.08
CCM2-209ENST00000477605 CTSZQ9UBR2 303 aa14.53□□□□□ -0.08
CCM2-209ENST00000477605 IGSF10Q6WRI0 2623 aa14.53□□□□□ -0.08
CCM2-209ENST00000477605 MGAQ8IWI9 3026 aa14.52□□□□□ -0.08
CCM2-209ENST00000477605 CADP27708 2225 aa14.52□□□□□ -0.08
CCM2-209ENST00000477605 CTRLP40313 264 aa14.52□□□□□ -0.09
CCM2-209ENST00000477605 ZNF124Q15973 351 aa14.52□□□□□ -0.09
CCM2-209ENST00000477605 CT83Q5H943 113 aa14.52□□□□□ -0.09
CCM2-209ENST00000477605 FAM162BQ5T6X4 162 aa14.52□□□□□ -0.09
CCM2-209ENST00000477605 NIT1Q86X76 327 aa14.52□□□□□ -0.09
CCM2-209ENST00000477605 NHLRC2Q8NBF2 726 aa14.52□□□□□ -0.09
CCM2-209ENST00000477605 GPR82Q96P67 336 aa14.52□□□□□ -0.09
CCM2-209ENST00000477605 TMEM133Q9H2Q1 129 aa14.52□□□□□ -0.09
CCM2-209ENST00000477605 MRPL36Q9P0J6 103 aaKnown RBP14.52□□□□□ -0.09
CCM2-209ENST00000477605 SOX21Q9Y651 276 aaPredicted RBP14.52□□□□□ -0.09
CCM2-209ENST00000477605 CA1P00915 261 aaPredicted RBP14.51□□□□□ -0.09
CCM2-209ENST00000477605 PMCHP20382 165 aa14.51□□□□□ -0.09
CCM2-209ENST00000477605 UCNP55089 124 aa14.51□□□□□ -0.09
CCM2-209ENST00000477605 SLAQ13239 276 aa14.51□□□□□ -0.09
CCM2-209ENST00000477605 BORCS7Q96B45 105 aa14.51□□□□□ -0.09
CCM2-209ENST00000477605 SSBP3Q9BWW4 388 aaPredicted RBP14.51□□□□□ -0.09
CCM2-209ENST00000477605 HYPMO75409 117 aa14.51□□□□□ -0.09
CCM2-209ENST00000477605 SLC25A5P05141 298 aaKnown RBP14.51□□□□□ -0.09
CCM2-209ENST00000477605 CRYGBP07316 175 aa14.51□□□□□ -0.09
CCM2-209ENST00000477605 RPL27AP46776 148 aaKnown RBP14.51□□□□□ -0.09
CCM2-209ENST00000477605 FMC1Q96HJ9 113 aa14.51□□□□□ -0.09
CCM2-209ENST00000477605 ZNF492Q9P255 531 aa14.51□□□□□ -0.09
CCM2-209ENST00000477605 RNF114Q9Y508 228 aa14.51□□□□□ -0.09
CCM2-209ENST00000477605 TRAV34A0A0B4J273 112 aa14.5□□□□□ -0.09
CCM2-209ENST00000477605 C22orf46C9J442 243 aa14.5□□□□□ -0.09
CCM2-209ENST00000477605 NBEAP1P0C6P0 100 aa14.5□□□□□ -0.09
CCM2-209ENST00000477605 C5orf17Q8NAS9 161 aa14.5□□□□□ -0.09
CCM2-209ENST00000477605 MLST8Q9BVC4 326 aa14.5□□□□□ -0.09
CCM2-209ENST00000477605 PGPA6NDG6 321 aa14.5□□□□□ -0.09
CCM2-209ENST00000477605 TOMM40O96008 361 aa14.5□□□□□ -0.09
CCM2-209ENST00000477605 C3orf79P0CE67 100 aa14.5□□□□□ -0.09
CCM2-209ENST00000477605 ORM2P19652 201 aa14.5□□□□□ -0.09
CCM2-209ENST00000477605 CASP6P55212 293 aa14.5□□□□□ -0.09
CCM2-209ENST00000477605 PMCHL1Q16048 86 aa14.5□□□□□ -0.09
CCM2-209ENST00000477605 KLHDC1Q8N7A1 406 aa14.5□□□□□ -0.09
CCM2-209ENST00000477605 OR1B1Q8NGR6 318 aa14.5□□□□□ -0.09
CCM2-209ENST00000477605 C8orf46Q8TAG6 207 aa14.5□□□□□ -0.09
CCM2-209ENST00000477605 A0A1B0GXF2 115 aa14.49□□□□□ -0.09
CCM2-209ENST00000477605 ENSAO43768 121 aaKnown RBP14.49□□□□□ -0.09
CCM2-209ENST00000477605 C11orf42Q8N5U0 333 aa14.49□□□□□ -0.09
CCM2-209ENST00000477605 BBC3Q96PG8 261 aaPredicted RBP14.49□□□□□ -0.09
CCM2-209ENST00000477605 DYNLRB1Q9NP97 96 aa14.49□□□□□ -0.09
CCM2-209ENST00000477605 TPSG1Q9NRR2 321 aa14.49□□□□□ -0.09
CCM2-209ENST00000477605 UQCR10Q9UDW1 63 aa14.49□□□□□ -0.09
CCM2-209ENST00000477605 K7ENP7 123 aa14.48□□□□□ -0.09
CCM2-209ENST00000477605 GAGE1Q13065 139 aa14.48□□□□□ -0.09
CCM2-209ENST00000477605 SPATA45Q537H7 98 aa14.48□□□□□ -0.09
CCM2-209ENST00000477605 RITA1Q96K30 269 aa14.48□□□□□ -0.09
CCM2-209ENST00000477605 ALKBH7Q9BT30 221 aaPredicted RBP14.48□□□□□ -0.09
CCM2-209ENST00000477605 PRSS22Q9GZN4 317 aa14.48□□□□□ -0.09
CCM2-209ENST00000477605 TNCP24821 2201 aa14.48□□□□□ -0.09
CCM2-209ENST00000477605 HIGD1CA8MV81 97 aa14.48□□□□□ -0.09
CCM2-209ENST00000477605 A8MWL6 223 aa14.48□□□□□ -0.09
CCM2-209ENST00000477605 GDF5OSQ5U4N7 250 aa14.48□□□□□ -0.09
CCM2-209ENST00000477605 GFRA4Q9GZZ7 299 aa14.48□□□□□ -0.09
CCM2-209ENST00000477605 RPP21Q9H633 154 aaKnown RBP14.48□□□□□ -0.09
CCM2-209ENST00000477605 ZNF835Q9Y2P0 537 aa14.48□□□□□ -0.09
CCM2-209ENST00000477605 FAM231BA6NCW3 169 aa14.47□□□□□ -0.09
CCM2-209ENST00000477605 LTAP01374 205 aa14.47□□□□□ -0.09
CCM2-209ENST00000477605 IGHV3-48P01763 117 aa14.47□□□□□ -0.09
CCM2-209ENST00000477605 GP9P14770 177 aa14.47□□□□□ -0.09
CCM2-209ENST00000477605 GNG5P63218 68 aa14.47□□□□□ -0.09
CCM2-209ENST00000477605 MMDQ15546 238 aa14.47□□□□□ -0.09
CCM2-209ENST00000477605 RNF5Q99942 180 aa14.47□□□□□ -0.09
CCM2-209ENST00000477605 SIGLEC9Q9Y336 463 aa14.47□□□□□ -0.09
CCM2-209ENST00000477605 C20orf202A1L168 122 aa14.46□□□□□ -0.09
CCM2-209ENST00000477605 HSBP1O75506 76 aa14.46□□□□□ -0.09
CCM2-209ENST00000477605 MOSP00540 346 aa14.46□□□□□ -0.09
CCM2-209ENST00000477605 TNXAQ16473 311 aa14.46□□□□□ -0.09
CCM2-209ENST00000477605 PRR27Q6MZM9 219 aa14.46□□□□□ -0.09
CCM2-209ENST00000477605 HCP5Q6MZN7 132 aa14.46□□□□□ -0.09
CCM2-209ENST00000477605 ZNF841Q6ZN19 808 aa14.46□□□□□ -0.09
CCM2-209ENST00000477605 SRSF8Q9BRL6 282 aaKnown RBP14.46□□□□□ -0.09
CCM2-209ENST00000477605 TMEM14CQ9P0S9 112 aa14.46□□□□□ -0.09
CCM2-209ENST00000477605 F11RQ9Y624 299 aaKnown RBP14.46□□□□□ -0.09
CCM2-209ENST00000477605 IGHV1-69-2A0A0G2JMI3 117 aa14.46□□□□□ -0.09
CCM2-209ENST00000477605 SHISA9B4DS77 424 aa14.46□□□□□ -0.09
CCM2-209ENST00000477605 IGLV1-47P01700 117 aa14.46□□□□□ -0.09
CCM2-209ENST00000477605 RBP4P02753 201 aa14.46□□□□□ -0.09
CCM2-209ENST00000477605 ZNF25P17030 456 aaPredicted RBP14.46□□□□□ -0.09
CCM2-209ENST00000477605 CYB5R2Q6BCY4 276 aa14.46□□□□□ -0.09
CCM2-209ENST00000477605 BLNKQ8WV28 456 aa14.46□□□□□ -0.09
CCM2-209ENST00000477605 C19orf71A6NCJ1 209 aa14.45□□□□□ -0.1
CCM2-209ENST00000477605 PLAUP00749 431 aa14.45□□□□□ -0.1
CCM2-209ENST00000477605 IGLC2P0DOY2 106 aa14.45□□□□□ -0.1
CCM2-209ENST00000477605 IGLC3P0DOY3 106 aa14.45□□□□□ -0.1
CCM2-209ENST00000477605 HBBP68871 147 aa14.45□□□□□ -0.1
CCM2-209ENST00000477605 COL5A1-AS1Q5SY13 56 aa14.45□□□□□ -0.1
CCM2-209ENST00000477605 GFRALQ6UXV0 394 aa14.45□□□□□ -0.1
CCM2-209ENST00000477605 YLPM1P49750 1951 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms