RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 TRAPPC1Q9Y5R8 145 aa8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 XKRY2A2RUG3 117 aa8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 I3L2K1 104 aa8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 HOXB4P17483 251 aaPredicted RBP8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 FXYD3Q14802 87 aa8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 C1orf122Q6ZSJ8 110 aa8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 TMEM183AQ8IXX5 376 aa8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 KIR3DL3Q8N743 410 aa8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 IGF2BP2-AS1Q96M15 143 aa8.76□□□□□ -1.01
HLA-DMB-260ENST00000477537 TACC2O95359 2948 aa8.75□□□□□ -1.01
HLA-DMB-260ENST00000477537 NDUFA3O95167 84 aa8.75□□□□□ -1.01
HLA-DMB-260ENST00000477537 GCGP01275 180 aa8.75□□□□□ -1.01
HLA-DMB-260ENST00000477537 IGLV2-8P01709 118 aa8.75□□□□□ -1.01
HLA-DMB-260ENST00000477537 MGST1P10620 155 aaKnown RBP8.75□□□□□ -1.01
HLA-DMB-260ENST00000477537 FABP4P15090 132 aa8.75□□□□□ -1.01
HLA-DMB-260ENST00000477537 EFNA4P52798 201 aa8.75□□□□□ -1.01
HLA-DMB-260ENST00000477537 DYNAPQ8N1N2 210 aa8.75□□□□□ -1.01
HLA-DMB-260ENST00000477537 STXBP6Q8NFX7 210 aa8.75□□□□□ -1.01
HLA-DMB-260ENST00000477537 FAM103A1Q9BTL3 118 aaKnown RBP8.75□□□□□ -1.01
HLA-DMB-260ENST00000477537 V9GYV3 84 aa8.75□□□□□ -1.01
HLA-DMB-260ENST00000477537 ABCA1O95477 2261 aa8.75□□□□□ -1.01
HLA-DMB-260ENST00000477537 WNK2Q9Y3S1 2297 aa8.75□□□□□ -1.01
HLA-DMB-260ENST00000477537 USP9YO00507 2555 aaPredicted RBP8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 PEX7O00628 323 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 IGLC1P0CG04 106 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 CNN1P51911 297 aaKnown RBP8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 LYZP61626 148 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 S100A12P80511 92 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 C5orf64Q2M2E5 130 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 RPEL1Q2QD12 228 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 BLNKQ8WV28 456 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 LINC00479Q96M42 142 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 RNASE7Q9H1E1 156 aaKnown RBP8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 CSMD2Q7Z408 3487 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 TRAV9-1A0A075B6T8 112 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 PSG1P11464 419 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 TAS2R60P59551 318 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 PLP1P60201 277 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 RANP62826 216 aaKnown RBP8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 SRSF1Q07955 248 aaKnown RBP eCLIP8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 PYY3Q5JQD4 70 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 LEMD1Q68G75 181 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 CCDC144NLQ6NUI1 221 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 NHLRC2Q8NBF2 726 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 SIRPDQ9H106 197 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 OSTCQ9NRP0 149 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 CDC42EP3Q9UKI2 254 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 HIGD1AQ9Y241 93 aa8.74□□□□□ -1.01
HLA-DMB-260ENST00000477537 DOPEY2Q9Y3R5 2298 aa8.73□□□□□ -1.01
HLA-DMB-260ENST00000477537 VPS13CQ709C8 3753 aa8.73□□□□□ -1.01
HLA-DMB-260ENST00000477537 TRAV34A0A0B4J273 112 aa8.73□□□□□ -1.01
HLA-DMB-260ENST00000477537 OOSP1A8MZH6 123 aa8.73□□□□□ -1.01
HLA-DMB-260ENST00000477537 K7EIM0 57 aa8.73□□□□□ -1.01
HLA-DMB-260ENST00000477537 GNG5P63218 68 aa8.73□□□□□ -1.01
HLA-DMB-260ENST00000477537 COA6Q5JTJ3 125 aaKnown RBP8.73□□□□□ -1.01
HLA-DMB-260ENST00000477537 MINOS1Q5TGZ0 78 aa8.73□□□□□ -1.01
HLA-DMB-260ENST00000477537 PACRGQ96M98 296 aaPredicted RBP8.73□□□□□ -1.01
HLA-DMB-260ENST00000477537 HIST1H2BLQ99880 126 aa8.73□□□□□ -1.01
HLA-DMB-260ENST00000477537 RASL11BQ9BPW5 248 aa8.73□□□□□ -1.01
HLA-DMB-260ENST00000477537 MINOS1-NBL1R4GNA1 71 aa8.73□□□□□ -1.01
HLA-DMB-260ENST00000477537 IGHV2-70DA0A0C4DH43 119 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 NCBP2LA6PVI3 153 aaKnown RBP8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 ISLRO14498 428 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 SLC25A5P05141 298 aaKnown RBP8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 FABP1P07148 127 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 NBEAP1P0C6P0 100 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 GP9P14770 177 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 MYCNOSP40205 109 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 OR1L6Q8NGR2 347 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 GSN-AS1Q9NRJ2 163 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 CELSR2Q9HCU4 2923 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 MED13LQ71F56 2210 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 AKAP6Q13023 2319 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 PGPA6NDG6 321 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 H3BTX0 84 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 TOX4O94842 621 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 IGKV1-17P01599 117 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 HIST1H1BP16401 226 aaKnown RBP8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 CBLN1P23435 193 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 PDLIM4P50479 330 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 YPEL3P61236 119 aaPredicted RBP8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 KLF17Q5JT82 389 aaPredicted RBP8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 IBA57Q5T440 356 aaKnown RBP8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 OR8I2Q8N0Y5 310 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 Q8N6K4 173 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 ARPC1AQ92747 370 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 RBM14Q96PK6 669 aaKnown RBP8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 BPESC1Q9GZL8 116 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 SERTAD4Q9NUC0 356 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 EPDR1Q9UM22 224 aa8.72□□□□□ -1.01
HLA-DMB-260ENST00000477537 CSMD1Q96PZ7 3565 aa8.71□□□□□ -1.01
HLA-DMB-260ENST00000477537 AMBPP02760 352 aa8.71□□□□□ -1.02
HLA-DMB-260ENST00000477537 RD3LP0DJH9 198 aa8.71□□□□□ -1.02
HLA-DMB-260ENST00000477537 PLA2G2AP14555 144 aa8.71□□□□□ -1.02
HLA-DMB-260ENST00000477537 TMEM11P17152 192 aa8.71□□□□□ -1.02
HLA-DMB-260ENST00000477537 ADMP35318 185 aa8.71□□□□□ -1.02
HLA-DMB-260ENST00000477537 CX3CL1P78423 397 aa8.71□□□□□ -1.02
HLA-DMB-260ENST00000477537 CDPF1Q6NVV7 123 aa8.71□□□□□ -1.02
HLA-DMB-260ENST00000477537 BAGE2Q86Y30 109 aa8.71□□□□□ -1.02
HLA-DMB-260ENST00000477537 SLC25A39Q9BZJ4 359 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms