RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 PSG1P11464 419 aa11.51□□□□□ -0.57
CLDN11-204ENST00000477531 SNRPD3P62318 126 aaKnown RBP11.51□□□□□ -0.57
CLDN11-204ENST00000477531 CCDC190Q86UF4 302 aa11.51□□□□□ -0.57
CLDN11-204ENST00000477531 OR51G1Q8NGK1 321 aa11.51□□□□□ -0.57
CLDN11-204ENST00000477531 C11orf45Q8TAV5 145 aa11.51□□□□□ -0.57
CLDN11-204ENST00000477531 DCANP1Q8TF63 244 aa11.51□□□□□ -0.57
CLDN11-204ENST00000477531 PHLDA1Q8WV24 401 aaPredicted RBP11.51□□□□□ -0.57
CLDN11-204ENST00000477531 GLMPQ8WWB7 406 aa11.51□□□□□ -0.57
CLDN11-204ENST00000477531 LINC00476Q8WZB0 136 aa11.51□□□□□ -0.57
CLDN11-204ENST00000477531 TRIM63Q969Q1 353 aa11.51□□□□□ -0.57
CLDN11-204ENST00000477531 C11orf68Q9H3H3 251 aaKnown RBP11.51□□□□□ -0.57
CLDN11-204ENST00000477531 INPP1P49441 399 aa11.5□□□□□ -0.57
CLDN11-204ENST00000477531 RPP30P78346 268 aaKnown RBP11.5□□□□□ -0.57
CLDN11-204ENST00000477531 USF2Q15853 346 aaPredicted RBP11.5□□□□□ -0.57
CLDN11-204ENST00000477531 ACTL10Q5JWF8 245 aa11.5□□□□□ -0.57
CLDN11-204ENST00000477531 FBXL17Q9UF56 701 aa11.5□□□□□ -0.57
CLDN11-204ENST00000477531 PAIP2BQ9ULR5 123 aaKnown RBP11.5□□□□□ -0.57
CLDN11-204ENST00000477531 V9GYH0 126 aa11.5□□□□□ -0.57
CLDN11-204ENST00000477531 KNCNA6PVL3 124 aa11.49□□□□□ -0.57
CLDN11-204ENST00000477531 FAM90A26D6RGX4 464 aa11.49□□□□□ -0.57
CLDN11-204ENST00000477531 SLC25A6P12236 298 aa11.49□□□□□ -0.57
CLDN11-204ENST00000477531 PSMG4Q5JS54 123 aa11.49□□□□□ -0.57
CLDN11-204ENST00000477531 SIGLEC15Q6ZMC9 328 aa11.49□□□□□ -0.57
CLDN11-204ENST00000477531 TRPT1Q86TN4 253 aaKnown RBP11.49□□□□□ -0.57
CLDN11-204ENST00000477531 RNF125Q96EQ8 232 aa11.49□□□□□ -0.57
CLDN11-204ENST00000477531 CIB3Q96Q77 187 aaPredicted RBP11.49□□□□□ -0.57
CLDN11-204ENST00000477531 PBDC1Q9BVG4 233 aa11.49□□□□□ -0.57
CLDN11-204ENST00000477531 SEPSECSQ9HD40 501 aaKnown RBP11.49□□□□□ -0.57
CLDN11-204ENST00000477531 NRN1Q9NPD7 142 aa11.49□□□□□ -0.57
CLDN11-204ENST00000477531 TMED3Q9Y3Q3 217 aa11.49□□□□□ -0.57
CLDN11-204ENST00000477531 BUB3O43684 328 aa11.48□□□□□ -0.57
CLDN11-204ENST00000477531 SFT2D2O95562 160 aa11.48□□□□□ -0.57
CLDN11-204ENST00000477531 GAMTQ14353 236 aa11.48□□□□□ -0.57
CLDN11-204ENST00000477531 ZNF79Q15937 498 aa11.48□□□□□ -0.57
CLDN11-204ENST00000477531 OR8G2PQ6IF36 304 aa11.48□□□□□ -0.57
CLDN11-204ENST00000477531 CENPSQ8N2Z9 138 aa11.48□□□□□ -0.57
CLDN11-204ENST00000477531 LRTM2Q8N967 370 aa11.48□□□□□ -0.57
CLDN11-204ENST00000477531 S100ZQ8WXG8 99 aa11.48□□□□□ -0.57
CLDN11-204ENST00000477531 RAB40CQ96S21 281 aa11.48□□□□□ -0.57
CLDN11-204ENST00000477531 HYDINQ4G0P3 5121 aa11.47□□□□□ -0.57
CLDN11-204ENST00000477531 SNRPGP15A8MWD9 76 aa11.47□□□□□ -0.57
CLDN11-204ENST00000477531 PITX3O75364 302 aa11.47□□□□□ -0.57
CLDN11-204ENST00000477531 IAPPP10997 89 aa11.47□□□□□ -0.57
CLDN11-204ENST00000477531 NANOS2P60321 138 aaKnown RBP11.47□□□□□ -0.57
CLDN11-204ENST00000477531 NUTF2P61970 127 aaKnown RBP11.47□□□□□ -0.57
CLDN11-204ENST00000477531 PPP1R14BQ96C90 147 aa11.47□□□□□ -0.57
CLDN11-204ENST00000477531 DEFB4AO15263 64 aa11.46□□□□□ -0.57
CLDN11-204ENST00000477531 HOXB5P09067 269 aa11.46□□□□□ -0.57
CLDN11-204ENST00000477531 UBE2MP61081 183 aaKnown RBP11.46□□□□□ -0.57
CLDN11-204ENST00000477531 LYZP61626 148 aa11.46□□□□□ -0.57
CLDN11-204ENST00000477531 ZNF90Q03938 601 aa11.46□□□□□ -0.57
CLDN11-204ENST00000477531 PPP1R1AQ13522 171 aa11.46□□□□□ -0.57
CLDN11-204ENST00000477531 TRIQKQ629K1 86 aa11.46□□□□□ -0.57
CLDN11-204ENST00000477531 C1QTNF4Q9BXJ3 329 aa11.46□□□□□ -0.57
CLDN11-204ENST00000477531 AGRNO00468 2067 aa11.46□□□□□ -0.57
CLDN11-204ENST00000477531 NAP1L6A6NFF2 107 aa11.45□□□□□ -0.58
CLDN11-204ENST00000477531 SYNGR2O43760 224 aa11.45□□□□□ -0.58
CLDN11-204ENST00000477531 MIFP14174 115 aa11.45□□□□□ -0.58
CLDN11-204ENST00000477531 ID1P41134 155 aa11.45□□□□□ -0.58
CLDN11-204ENST00000477531 WRBO00258 174 aa11.44□□□□□ -0.58
CLDN11-204ENST00000477531 CFDP00746 253 aaPredicted RBP11.44□□□□□ -0.58
CLDN11-204ENST00000477531 GIG44P09565 113 aaPredicted RBP11.44□□□□□ -0.58
CLDN11-204ENST00000477531 OR2F1Q13607 317 aa11.44□□□□□ -0.58
CLDN11-204ENST00000477531 C1orf194Q5T5A4 169 aa11.44□□□□□ -0.58
CLDN11-204ENST00000477531 GGNBP1Q5YKI7 109 aa11.44□□□□□ -0.58
CLDN11-204ENST00000477531 C2CD4CQ8TF44 421 aa11.44□□□□□ -0.58
CLDN11-204ENST00000477531 TRGV9Q99603 122 aa11.44□□□□□ -0.58
CLDN11-204ENST00000477531 WDR12Q9GZL7 423 aaKnown RBP11.44□□□□□ -0.58
CLDN11-204ENST00000477531 SRRQ9GZT4 340 aa11.44□□□□□ -0.58
CLDN11-204ENST00000477531 MAGT1Q9H0U3 335 aa11.44□□□□□ -0.58
CLDN11-204ENST00000477531 TBC1D24Q9ULP9 559 aa11.44□□□□□ -0.58
CLDN11-204ENST00000477531 IGKV1D-37A0A075B6S9 117 aa11.43□□□□□ -0.58
CLDN11-204ENST00000477531 IGHV4-28A0A0C4DH34 117 aa11.43□□□□□ -0.58
CLDN11-204ENST00000477531 CENPXA8MT69 81 aa11.43□□□□□ -0.58
CLDN11-204ENST00000477531 C4BPBP20851 252 aa11.43□□□□□ -0.58
CLDN11-204ENST00000477531 S100A7P31151 101 aa11.43□□□□□ -0.58
CLDN11-204ENST00000477531 NKX2-1P43699 371 aaPredicted RBP11.43□□□□□ -0.58
CLDN11-204ENST00000477531 SPANXN5Q5MJ07 72 aa11.43□□□□□ -0.58
CLDN11-204ENST00000477531 OR8I2Q8N0Y5 310 aa11.43□□□□□ -0.58
CLDN11-204ENST00000477531 Q8NAQ8 132 aa11.43□□□□□ -0.58
CLDN11-204ENST00000477531 COQ8AQ8NI60 647 aa11.43□□□□□ -0.58
CLDN11-204ENST00000477531 LINC00052Q96N35 136 aa11.43□□□□□ -0.58
CLDN11-204ENST00000477531 CLEC5AQ9NY25 188 aa11.43□□□□□ -0.58
CLDN11-204ENST00000477531 STRAPQ9Y3F4 350 aaKnown RBP11.43□□□□□ -0.58
CLDN11-204ENST00000477531 ZNF705EA8MWA4 302 aaPredicted RBP11.42□□□□□ -0.58
CLDN11-204ENST00000477531 C11orf94C9JXX5 98 aa11.42□□□□□ -0.58
CLDN11-204ENST00000477531 H3BMM0 161 aa11.42□□□□□ -0.58
CLDN11-204ENST00000477531 IFNA21P01568 189 aa11.42□□□□□ -0.58
CLDN11-204ENST00000477531 TCTAP57738 103 aa11.42□□□□□ -0.58
CLDN11-204ENST00000477531 ZNF846Q147U1 533 aa11.42□□□□□ -0.58
CLDN11-204ENST00000477531 THAP8Q8NA92 274 aa11.42□□□□□ -0.58
CLDN11-204ENST00000477531 HRH4Q9H3N8 390 aa11.42□□□□□ -0.58
CLDN11-204ENST00000477531 C9orf170A2RU37 121 aa11.41□□□□□ -0.58
CLDN11-204ENST00000477531 RBMY1A1P0DJD3 496 aaKnown RBP11.41□□□□□ -0.58
CLDN11-204ENST00000477531 RBMY1CP0DJD4 496 aa11.41□□□□□ -0.58
CLDN11-204ENST00000477531 HLA-DRB4P13762 266 aa11.41□□□□□ -0.58
CLDN11-204ENST00000477531 AKR1C1Q04828 323 aa11.41□□□□□ -0.58
CLDN11-204ENST00000477531 RBMY1FQ15415 496 aaKnown RBP11.41□□□□□ -0.58
CLDN11-204ENST00000477531 SAMD13Q5VXD3 122 aa11.41□□□□□ -0.58
CLDN11-204ENST00000477531 LGALS9CQ6DKI2 356 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms