RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520		H0YGG7	62 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520		H3BP45	60 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	RHOD	O00212	210 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	DNPH1	O43598	174 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	FCN3	O75636	299 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	APOM	O95445	188 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	CRYAA	P02489	173 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520		P04436	131 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	ARL14EPL	P0DKL9	152 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	FGF6	P10767	208 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	IAPP	P10997	89 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	PVR	P15151	417 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	GCSH	P23434	173 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	MFAP2	P55001	183 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	FGF12	P61328	243 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	RPL30	P62888	115 aa	Known RBP	3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	PMP22	Q01453	160 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	SRY	Q05066	204 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	MEF2C	Q06413	473 aa	Predicted RBP	3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	KIAA1644	Q3SXP7	199 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	CENPW	Q5EE01	88 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	SLC25A53	Q5H9E4	307 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	FAM120AOS	Q5T036	256 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	C10orf128	Q5T292	105 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	GUSBP11	Q6P575	273 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520		Q6ZUT4	128 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	PIP4P1	Q86T03	277 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	YRDC	Q86U90	279 aa	Known RBP	3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	MKX	Q8IYA7	352 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	FGFRL1	Q8N441	504 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	RPRML	Q8N4K4	120 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	ZNF611	Q8N823	705 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	GATD1	Q8NB37	220 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	CT55	Q8WUE5	264 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	NRGN	Q92686	78 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	PIGT	Q969N2	578 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	RNF183	Q96D59	192 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	COQ2	Q96H96	371 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520		Q96MF0	132 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	NRTN	Q99748	197 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	KLK15	Q9H2R5	256 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	HEYL	Q9NQ87	328 aa	Predicted RBP	3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	SERTAD4	Q9NUC0	356 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	HRASLS2	Q9NWW9	162 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	TECR	Q9NZ01	308 aa	Known RBP	3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	IDI2-AS1	Q9NZ38	188 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	CLCF1	Q9UBD9	225 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	IL36RN	Q9UBH0	155 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	SS18L2	Q9UHA2	77 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	POLDIP2	Q9Y2S7	368 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	CPAMD8	Q8IZJ3	1885 aa		3.83	□□□□□ -1.8
PTCD3-212	ENST00000477520	TRBV20-1	A0A075B6N2	111 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	IGHV1OR21-1	A0A087WYE8	117 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	LY6G6E	A0A0G2JKS1	128 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	LOC101059948	A0A1B0GTJ6	334 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	FABP5P3	A8MUU1	101 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520		H0YIG0	161 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520		M0R135	149 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	CLDN14	O95500	239 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	IGKV1-5	P01602	117 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520		P0C879	139 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	BCL3	P20749	454 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	MPV17	P39210	176 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	RPS28	P62857	69 aa	Known RBP	3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	GNG3	P63215	75 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	GAGE2B	Q13066	116 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	ZNF146	Q15072	292 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	GAGE2E	Q4V326	116 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	TTC32	Q5I0X7	151 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520		Q6AWC8	147 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	DEFB124	Q8NES8	71 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	NUP35	Q8NFH5	326 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	FLVCR1-AS1	Q8TAF5	88 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	PPP1R35	Q8TAP8	253 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	GATAD1	Q8WUU5	269 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	GLMP	Q8WWB7	406 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	ZNF799	Q96GE5	643 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	LYZL4	Q96KX0	146 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	ZNF492	Q9P255	531 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	GAGE2D	Q9UEU5	116 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520		U3KQA8	63 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520	ACACA	Q13085	2346 aa		3.82	□□□□□ -1.8
PTCD3-212	ENST00000477520		A0A0G2JRQ6	117 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	ZNF816-ZNF321P	A0A0X1KG74	233 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520		B5MCH6	92 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520		E9PLN8	166 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	NTN3	O00634	580 aa	Predicted RBP	3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	CNIH1	O95406	144 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	CELA2A	P08217	269 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	MGST1	P10620	155 aa	Known RBP	3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	IFITM1	P13164	125 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	MYF5	P13349	255 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	OTX2	P32243	289 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	PCBD1	P61457	104 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	RPL8	P62917	257 aa	Known RBP	3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	PLGLB1	Q02325	96 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	GUSBP1	Q15486	140 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	RBPMS2	Q6ZRY4	209 aa	Known RBP	3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	SSX8	Q7RTT4	187 aa		3.81	□□□□□ -1.8
PTCD3-212	ENST00000477520	H2BFWT	Q7Z2G1	175 aa		3.81	□□□□□ -1.8

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