RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 STAG3L3P0CL85 134 aa13.21□□□□□ -0.29
EPHB4-204ENST00000477446 CD81P60033 236 aa13.21□□□□□ -0.29
EPHB4-204ENST00000477446 PRR20EP86478 221 aa13.21□□□□□ -0.29
EPHB4-204ENST00000477446 PRR20CP86479 221 aa13.21□□□□□ -0.29
EPHB4-204ENST00000477446 PRR20DP86480 221 aa13.21□□□□□ -0.29
EPHB4-204ENST00000477446 PRR20BP86481 221 aa13.21□□□□□ -0.29
EPHB4-204ENST00000477446 PRR20AP86496 221 aa13.21□□□□□ -0.29
EPHB4-204ENST00000477446 KRTAP21-3Q3LHN1 58 aa13.21□□□□□ -0.29
EPHB4-204ENST00000477446 C10orf55Q5SWW7 151 aa13.21□□□□□ -0.29
EPHB4-204ENST00000477446 MIC13Q5XKP0 118 aa13.21□□□□□ -0.29
EPHB4-204ENST00000477446 MDFIQ99750 246 aa13.21□□□□□ -0.29
EPHB4-204ENST00000477446 ZNF727A8MUV8 499 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 E7EUB6 86 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 G3V318 75 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 HAX1O00165 279 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 PDE6DO43924 150 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 OR2C1O95371 312 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 OPN1MWP04001 364 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 OPN1MW2P0DN77 364 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 OPN1MW3P0DN78 364 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 KLHDC1Q8N7A1 406 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 STPG3Q8N7X2 389 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 SGMS2Q8NHU3 365 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 SRSF12Q8WXF0 261 aaKnown RBP13.2□□□□□ -0.3
EPHB4-204ENST00000477446 HIST1H2BAQ96A08 127 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 SDF2L1Q9HCN8 221 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 NAT8Q9UHE5 227 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 SLC45A2Q9UMX9 530 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 AKR1C3P42330 323 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 CRIP2P52943 208 aaPredicted RBP13.2□□□□□ -0.3
EPHB4-204ENST00000477446 CTDSP1Q9GZU7 261 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 TMPRSS5Q9H3S3 457 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 ZNF580Q9UK33 172 aa13.2□□□□□ -0.3
EPHB4-204ENST00000477446 TRAV41A0A0B4J266 112 aa13.19□□□□□ -0.3
EPHB4-204ENST00000477446 F6UZH7 168 aa13.19□□□□□ -0.3
EPHB4-204ENST00000477446 HMGB3O15347 200 aaKnown RBP13.19□□□□□ -0.3
EPHB4-204ENST00000477446 RPL27AP46776 148 aaKnown RBP13.19□□□□□ -0.3
EPHB4-204ENST00000477446 GAMTQ14353 236 aa13.19□□□□□ -0.3
EPHB4-204ENST00000477446 ECSCRQ19T08 205 aa13.19□□□□□ -0.3
EPHB4-204ENST00000477446 TMEM241Q24JQ0 296 aa13.19□□□□□ -0.3
EPHB4-204ENST00000477446 ETFRF1Q6IPR1 90 aa13.19□□□□□ -0.3
EPHB4-204ENST00000477446 C10orf99Q6UWK7 81 aa13.19□□□□□ -0.3
EPHB4-204ENST00000477446 CYP2G1PQ6ZSU1 146 aa13.19□□□□□ -0.3
EPHB4-204ENST00000477446 IQCF2Q8IXL9 164 aa13.19□□□□□ -0.3
EPHB4-204ENST00000477446 OR10W1Q8NGF6 305 aa13.19□□□□□ -0.3
EPHB4-204ENST00000477446 RNF2Q99496 336 aa13.19□□□□□ -0.3
EPHB4-204ENST00000477446 COL6A5A8TX70 2615 aa13.18□□□□□ -0.3
EPHB4-204ENST00000477446 CGB1A6NKQ9 187 aa13.18□□□□□ -0.3
EPHB4-204ENST00000477446 PAGE4O60829 102 aa13.18□□□□□ -0.3
EPHB4-204ENST00000477446 CLN5O75503 358 aa13.18□□□□□ -0.3
EPHB4-204ENST00000477446 APELAP0DMC3 54 aa13.18□□□□□ -0.3
EPHB4-204ENST00000477446 RAB5BP61020 215 aa13.18□□□□□ -0.3
EPHB4-204ENST00000477446 C19orf54Q5BKX5 351 aa13.18□□□□□ -0.3
EPHB4-204ENST00000477446 UNQ5815/PRO19632Q6UWF5 114 aa13.18□□□□□ -0.3
EPHB4-204ENST00000477446 ZNF329Q86UD4 541 aa13.18□□□□□ -0.3
EPHB4-204ENST00000477446 ZNF114Q8NC26 417 aa13.18□□□□□ -0.3
EPHB4-204ENST00000477446 WIPF2Q8TF74 440 aaPredicted RBP13.18□□□□□ -0.3
EPHB4-204ENST00000477446 OR4F4Q96R69 305 aa13.18□□□□□ -0.3
EPHB4-204ENST00000477446 SRSF8Q9BRL6 282 aaKnown RBP13.18□□□□□ -0.3
EPHB4-204ENST00000477446 ARL2-SNX15V9GYD0 113 aa13.18□□□□□ -0.3
EPHB4-204ENST00000477446 PSMB11A5LHX3 300 aa13.17□□□□□ -0.3
EPHB4-204ENST00000477446 C1orf196B1AJZ1 125 aa13.17□□□□□ -0.3
EPHB4-204ENST00000477446 TEX22C9J3V5 150 aa13.17□□□□□ -0.3
EPHB4-204ENST00000477446 LINC00869P0C866 280 aa13.17□□□□□ -0.3
EPHB4-204ENST00000477446 PPIFP30405 207 aaKnown RBP13.17□□□□□ -0.3
EPHB4-204ENST00000477446 CFHR3Q02985 330 aa13.17□□□□□ -0.3
EPHB4-204ENST00000477446 GCSAMLQ5JQS6 135 aa13.17□□□□□ -0.3
EPHB4-204ENST00000477446 ASPHD1Q5U4P2 390 aa13.17□□□□□ -0.3
EPHB4-204ENST00000477446 PVRIGQ6DKI7 326 aa13.17□□□□□ -0.3
EPHB4-204ENST00000477446 SLC16A13Q7RTY0 426 aa13.17□□□□□ -0.3
EPHB4-204ENST00000477446 SMIM7Q9BQ49 75 aa13.17□□□□□ -0.3
EPHB4-204ENST00000477446 C11orf94C9JXX5 98 aa13.16□□□□□ -0.3
EPHB4-204ENST00000477446 CORTO00230 105 aa13.16□□□□□ -0.3
EPHB4-204ENST00000477446 RAB5AP20339 215 aa13.16□□□□□ -0.3
EPHB4-204ENST00000477446 KRTAP10-3P60369 221 aa13.16□□□□□ -0.3
EPHB4-204ENST00000477446 WT1-ASQ06250 92 aa13.16□□□□□ -0.3
EPHB4-204ENST00000477446 OR5AU1Q8NGC0 362 aa13.16□□□□□ -0.3
EPHB4-204ENST00000477446 WFDC12Q8WWY7 111 aa13.16□□□□□ -0.3
EPHB4-204ENST00000477446 TENM1Q9UKZ4 2725 aa13.16□□□□□ -0.3
EPHB4-204ENST00000477446 TAS2R45P59539 299 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 SELENOTP62341 195 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 SLC35B1P78383 322 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 FAM24BQ8N5W8 94 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 TMEM68Q96MH6 324 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 YPEL4Q96NS1 127 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 BIN3Q9NQY0 253 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 TMEM167BQ9NRX6 74 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 FUT9Q9Y231 359 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 ARL14EPLP0DKL9 152 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 CTRB1P17538 263 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 OR10J1P30954 320 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 CTRB2Q6GPI1 263 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 C12orf54Q6X4T0 127 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 C1QL4Q86Z23 238 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 OR5T1Q8NG75 326 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 ISOC2Q96AB3 205 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 MRPL32Q9BYC8 188 aaKnown RBP13.15□□□□□ -0.3
EPHB4-204ENST00000477446 PARLQ9H300 379 aa13.15□□□□□ -0.3
EPHB4-204ENST00000477446 TECRQ9NZ01 308 aaKnown RBP13.15□□□□□ -0.3
EPHB4-204ENST00000477446 EIF3GO75821 320 aaKnown RBP eCLIP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms