RNA–Protein interactions for RNA: ENST00000477424.2

C4A-253, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-253ENST00000477424 C16orf54Q6UWD8 224 aa13.18□□□□□ -0.3
C4A-253ENST00000477424 STXBP6Q8NFX7 210 aa13.18□□□□□ -0.3
C4A-253ENST00000477424 RNF125Q96EQ8 232 aa13.18□□□□□ -0.3
C4A-253ENST00000477424 OVOL2Q9BRP0 275 aa13.18□□□□□ -0.3
C4A-253ENST00000477424 RABAC1Q9UI14 185 aa13.18□□□□□ -0.3
C4A-253ENST00000477424 TRAV2A0A0B4J234 112 aa13.17□□□□□ -0.3
C4A-253ENST00000477424 K7EQG2 157 aa13.17□□□□□ -0.3
C4A-253ENST00000477424 DNASE2O00115 360 aaPredicted RBP13.17□□□□□ -0.3
C4A-253ENST00000477424 CCNKO75909 580 aa13.17□□□□□ -0.3
C4A-253ENST00000477424 PAX9P55771 341 aa13.17□□□□□ -0.3
C4A-253ENST00000477424 PAFAH1B2P68402 229 aa13.17□□□□□ -0.3
C4A-253ENST00000477424 IFITM3Q01628 133 aa13.17□□□□□ -0.3
C4A-253ENST00000477424 ASAH1Q13510 395 aa13.17□□□□□ -0.3
C4A-253ENST00000477424 IAH1Q2TAA2 248 aaPredicted RBP13.17□□□□□ -0.3
C4A-253ENST00000477424 THAP8Q8NA92 274 aa13.17□□□□□ -0.3
C4A-253ENST00000477424 ZBTB8BQ8NAP8 495 aaPredicted RBP13.17□□□□□ -0.3
C4A-253ENST00000477424 SCGB1D2O95969 90 aa13.16□□□□□ -0.3
C4A-253ENST00000477424 DEFB131AP59861 70 aa13.16□□□□□ -0.3
C4A-253ENST00000477424 OR2F1Q13607 317 aa13.16□□□□□ -0.3
C4A-253ENST00000477424 DEFB135Q30KP9 77 aa13.16□□□□□ -0.3
C4A-253ENST00000477424 CASC10Q5T4H9 136 aa13.16□□□□□ -0.3
C4A-253ENST00000477424 LEMD1Q68G75 181 aa13.16□□□□□ -0.3
C4A-253ENST00000477424 ACOT7LQ6ZUV0 252 aa13.16□□□□□ -0.3
C4A-253ENST00000477424 DCANP1Q8TF63 244 aa13.16□□□□□ -0.3
C4A-253ENST00000477424 GRAMD2BQ96HH9 432 aa13.16□□□□□ -0.3
C4A-253ENST00000477424 NARS2Q96I59 477 aaKnown RBP13.16□□□□□ -0.3
C4A-253ENST00000477424 TRGV9Q99603 122 aa13.16□□□□□ -0.3
C4A-253ENST00000477424 RCL1Q9Y2P8 373 aaKnown RBP13.16□□□□□ -0.3
C4A-253ENST00000477424 STRAPQ9Y3F4 350 aaKnown RBP13.16□□□□□ -0.3
C4A-253ENST00000477424 PMS2P5A8MQ11 134 aa13.15□□□□□ -0.3
C4A-253ENST00000477424 BUB3O43684 328 aa13.15□□□□□ -0.3
C4A-253ENST00000477424 UPK1BO75841 260 aa13.15□□□□□ -0.3
C4A-253ENST00000477424 H2AFB2P0C5Z0 115 aa13.15□□□□□ -0.3
C4A-253ENST00000477424 APOC4P55056 127 aa13.15□□□□□ -0.3
C4A-253ENST00000477424 RPP30P78346 268 aaKnown RBP13.15□□□□□ -0.3
C4A-253ENST00000477424 STPG3Q8N7X2 389 aa13.15□□□□□ -0.3
C4A-253ENST00000477424 ZNF431Q8TF32 576 aaPredicted RBP13.15□□□□□ -0.3
C4A-253ENST00000477424 PBDC1Q9BVG4 233 aa13.15□□□□□ -0.3
C4A-253ENST00000477424 PSENENQ9NZ42 101 aa13.15□□□□□ -0.3
C4A-253ENST00000477424 CSMD3Q7Z407 3707 aa13.14□□□□□ -0.31
C4A-253ENST00000477424 FAM240BA0A1B0GVZ2 78 aa13.14□□□□□ -0.31
C4A-253ENST00000477424 LYZP61626 148 aa13.14□□□□□ -0.31
C4A-253ENST00000477424 ZNF846Q147U1 533 aa13.14□□□□□ -0.31
C4A-253ENST00000477424 ZFAND6Q6FIF0 208 aa13.14□□□□□ -0.31
C4A-253ENST00000477424 SMIM8Q96KF7 97 aa13.14□□□□□ -0.31
C4A-253ENST00000477424 WDR12Q9GZL7 423 aaKnown RBP13.14□□□□□ -0.31
C4A-253ENST00000477424 GSKIPQ9P0R6 139 aa13.14□□□□□ -0.31
C4A-253ENST00000477424 KIR2DL5BA0A0G2JN68 375 aa13.13□□□□□ -0.31
C4A-253ENST00000477424 KIR2DL5BA0A0G2JPC4 375 aa13.13□□□□□ -0.31
C4A-253ENST00000477424 MBPP02686 304 aaPredicted RBP13.13□□□□□ -0.31
C4A-253ENST00000477424 ZNF688P0C7X2 276 aa13.13□□□□□ -0.31
C4A-253ENST00000477424 LYL1P12980 280 aa13.13□□□□□ -0.31
C4A-253ENST00000477424 EIF2B2P49770 351 aaKnown RBP13.13□□□□□ -0.31
C4A-253ENST00000477424 CMC4P56277 68 aaPredicted RBP13.13□□□□□ -0.31
C4A-253ENST00000477424 OR8G2PQ6IF36 304 aa13.13□□□□□ -0.31
C4A-253ENST00000477424 MZT2BQ6NZ67 158 aa13.13□□□□□ -0.31
C4A-253ENST00000477424 TMEM182Q6ZP80 229 aaPredicted RBP13.13□□□□□ -0.31
C4A-253ENST00000477424 KIR2DL5AQ8N109 375 aa13.13□□□□□ -0.31
C4A-253ENST00000477424 KIR2DL5BQ8NHK3 375 aa13.13□□□□□ -0.31
C4A-253ENST00000477424 STARD9Q9P2P6 4700 aa13.12□□□□□ -0.31
C4A-253ENST00000477424 HELTA6NFD8 242 aa13.12□□□□□ -0.31
C4A-253ENST00000477424 AKR1C1Q04828 323 aa13.12□□□□□ -0.31
C4A-253ENST00000477424 TMEM14EPQ6UXP3 125 aa13.12□□□□□ -0.31
C4A-253ENST00000477424 SIGLEC15Q6ZMC9 328 aa13.12□□□□□ -0.31
C4A-253ENST00000477424 Q6ZWC4 215 aa13.12□□□□□ -0.31
C4A-253ENST00000477424 C12orf45Q8N5I9 185 aaPredicted RBP13.12□□□□□ -0.31
C4A-253ENST00000477424 TENM2Q9NT68 2774 aa13.11□□□□□ -0.31
C4A-253ENST00000477424 FAM25EA8MYX2 175 aa13.11□□□□□ -0.31
C4A-253ENST00000477424 UBE2CO00762 179 aa13.11□□□□□ -0.31
C4A-253ENST00000477424 SPRY2O43597 315 aa13.11□□□□□ -0.31
C4A-253ENST00000477424 METTL15P1P0C7V9 234 aa13.11□□□□□ -0.31
C4A-253ENST00000477424 GATA2P23769 480 aaPredicted RBP13.11□□□□□ -0.31
C4A-253ENST00000477424 GSG1LQ6UXU4 331 aa13.11□□□□□ -0.31
C4A-253ENST00000477424 RAB40CQ96S21 281 aa13.11□□□□□ -0.31
C4A-253ENST00000477424 TP53TG1Q9Y2A0 90 aa13.11□□□□□ -0.31
C4A-253ENST00000477424 C7orf66A4D0T2 115 aa13.1□□□□□ -0.31
C4A-253ENST00000477424 KNCNA6PVL3 124 aa13.1□□□□□ -0.31
C4A-253ENST00000477424 SNRPGP15A8MWD9 76 aa13.1□□□□□ -0.31
C4A-253ENST00000477424 TSC22D2O75157 780 aa13.1□□□□□ -0.31
C4A-253ENST00000477424 FABP1P07148 127 aa13.1□□□□□ -0.31
C4A-253ENST00000477424 RRAS2P62070 204 aaPredicted RBP13.1□□□□□ -0.31
C4A-253ENST00000477424 ARL16Q0P5N6 197 aa13.1□□□□□ -0.31
C4A-253ENST00000477424 RNF183Q96D59 192 aa13.1□□□□□ -0.31
C4A-253ENST00000477424 NRN1Q9NPD7 142 aa13.1□□□□□ -0.31
C4A-253ENST00000477424 SMCO3A2RU48 225 aa13.09□□□□□ -0.31
C4A-253ENST00000477424 K7EPK0 472 aa13.09□□□□□ -0.31
C4A-253ENST00000477424 TAS2R30P59541 319 aa13.09□□□□□ -0.31
C4A-253ENST00000477424 TMEM144Q7Z5S9 345 aa13.09□□□□□ -0.31
C4A-253ENST00000477424 NRARPQ7Z6K4 114 aa13.09□□□□□ -0.31
C4A-253ENST00000477424 ENKURQ8TC29 256 aa13.09□□□□□ -0.31
C4A-253ENST00000477424 CSTL1Q9H114 145 aa13.09□□□□□ -0.31
C4A-253ENST00000477424 C11orf1Q9H5F2 150 aa13.09□□□□□ -0.31
C4A-253ENST00000477424 BATF3Q9NR55 127 aa13.09□□□□□ -0.31
C4A-253ENST00000477424 C5orf51A6NDU8 294 aa13.08□□□□□ -0.32
C4A-253ENST00000477424 NUP62P37198 522 aaPredicted RBP13.08□□□□□ -0.32
C4A-253ENST00000477424 AP2S1P53680 142 aaPredicted RBP13.08□□□□□ -0.32
C4A-253ENST00000477424 DLK1P80370 383 aa13.08□□□□□ -0.32
C4A-253ENST00000477424 EWSR1Q01844 656 aaKnown RBP eCLIP13.08□□□□□ -0.32
C4A-253ENST00000477424 PSMG4Q5JS54 123 aa13.08□□□□□ -0.32
C4A-253ENST00000477424 TRPT1Q86TN4 253 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms