RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 METTL26Q96S19 204 aa9.28□□□□□ -0.92
CLCNKA-205ENST00000477360 RHPN1-AS1Q9BWJ2 59 aa9.28□□□□□ -0.92
CLCNKA-205ENST00000477360 OR5AC2Q9NZP5 309 aa9.28□□□□□ -0.92
CLCNKA-205ENST00000477360 MRPL36Q9P0J6 103 aaKnown RBP9.28□□□□□ -0.92
CLCNKA-205ENST00000477360 PFDN2Q9UHV9 154 aa9.28□□□□□ -0.92
CLCNKA-205ENST00000477360 G3V3Q6 166 aa9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 H3BP45 60 aa9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 TOMM40O96008 361 aa9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 IGHV3-48P01763 117 aa9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 NPPCP23582 126 aa9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 CD81P60033 236 aa9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 PAFAH1B2P68402 229 aa9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 MLANAQ16655 118 aa9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 LRRC37A5PQ49AS3 106 aa9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 FAM90A2PQ658T7 463 aa9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 LINC00322Q6ZN03 302 aaPredicted RBP9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 TMEM252Q8N6L7 170 aa9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 OR2T35Q8NGX2 323 aa9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 THAP6Q8TBB0 222 aa9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 NARS2Q96I59 477 aaKnown RBP9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 SLC35E1Q96K37 410 aa9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 GGACTQ9BVM4 153 aa9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 SLC25A31Q9H0C2 315 aa9.27□□□□□ -0.93
CLCNKA-205ENST00000477360 STAB2Q8WWQ8 2551 aa9.26□□□□□ -0.93
CLCNKA-205ENST00000477360 EDN2P20800 178 aa9.26□□□□□ -0.93
CLCNKA-205ENST00000477360 SULT1A1P50225 295 aa9.26□□□□□ -0.93
CLCNKA-205ENST00000477360 CAV2P51636 162 aa9.26□□□□□ -0.93
CLCNKA-205ENST00000477360 DLK1P80370 383 aa9.26□□□□□ -0.93
CLCNKA-205ENST00000477360 BAXQ07812 192 aa9.26□□□□□ -0.93
CLCNKA-205ENST00000477360 GAMTQ14353 236 aa9.26□□□□□ -0.93
CLCNKA-205ENST00000477360 THAP8Q8NA92 274 aa9.26□□□□□ -0.93
CLCNKA-205ENST00000477360 OR10P1Q8NGE3 313 aa9.26□□□□□ -0.93
CLCNKA-205ENST00000477360 NPIPB3Q92617 1050 aa9.26□□□□□ -0.93
CLCNKA-205ENST00000477360 ST6GAL2Q96JF0 529 aa9.26□□□□□ -0.93
CLCNKA-205ENST00000477360 TM2D3Q9BRN9 247 aa9.26□□□□□ -0.93
CLCNKA-205ENST00000477360 TUBA4BQ9H853 241 aa9.26□□□□□ -0.93
CLCNKA-205ENST00000477360 MBD2Q9UBB5 411 aa9.26□□□□□ -0.93
CLCNKA-205ENST00000477360 U3KQE9 123 aa9.26□□□□□ -0.93
CLCNKA-205ENST00000477360 DNAH9Q9NYC9 4486 aa9.26□□□□□ -0.93
CLCNKA-205ENST00000477360 A0A1B0GVG6 124 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 IGSF23A1L1A6 192 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 FAM24AA6NFZ4 105 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 OR11H12B2RN74 326 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 METTL15P1P0C7V9 234 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 RD3LP0DJH9 198 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 EIF2B2P49770 351 aaKnown RBP9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 AP2S1P53680 142 aaPredicted RBP9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 ATP6V1FQ16864 119 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 TIGITQ495A1 244 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 OR8G2PQ6IF36 304 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 STX12Q86Y82 276 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 TCTE3Q8IZS6 198 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 OR51G1Q8NGK1 321 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 ACY3Q96HD9 319 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 GRAMD2BQ96HH9 432 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 TRGV9Q99603 122 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 ZMAT4Q9H898 229 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 SEPSECSQ9HD40 501 aaKnown RBP9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 SLC45A2Q9UMX9 530 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 U3KQK5 164 aa9.25□□□□□ -0.93
CLCNKA-205ENST00000477360 COL7A1Q02388 2944 aa9.24□□□□□ -0.93
CLCNKA-205ENST00000477360 HELTA6NFD8 242 aa9.24□□□□□ -0.93
CLCNKA-205ENST00000477360 CCNKO75909 580 aa9.24□□□□□ -0.93
CLCNKA-205ENST00000477360 DFFBO76075 338 aa9.24□□□□□ -0.93
CLCNKA-205ENST00000477360 CD7P09564 240 aa9.24□□□□□ -0.93
CLCNKA-205ENST00000477360 S100A7P31151 101 aa9.24□□□□□ -0.93
CLCNKA-205ENST00000477360 S100A11P31949 105 aa9.24□□□□□ -0.93
CLCNKA-205ENST00000477360 HBG1P69891 147 aa9.24□□□□□ -0.93
CLCNKA-205ENST00000477360 HBG2P69892 147 aa9.24□□□□□ -0.93
CLCNKA-205ENST00000477360 ARL16Q0P5N6 197 aa9.24□□□□□ -0.93
CLCNKA-205ENST00000477360 VWC2Q2TAL6 325 aa9.24□□□□□ -0.93
CLCNKA-205ENST00000477360 Q5BKY6 102 aa9.24□□□□□ -0.93
CLCNKA-205ENST00000477360 SBSPONQ8IVN8 264 aa9.24□□□□□ -0.93
CLCNKA-205ENST00000477360 AQP10Q96PS8 301 aa9.24□□□□□ -0.93
CLCNKA-205ENST00000477360 RNF2Q99496 336 aa9.24□□□□□ -0.93
CLCNKA-205ENST00000477360 hCG_2014768A0A024R1R8 64 aa9.23□□□□□ -0.93
CLCNKA-205ENST00000477360 ZFP92A6NM28 416 aa9.23□□□□□ -0.93
CLCNKA-205ENST00000477360 HNRNPCP07910 306 aaKnown RBP eCLIP9.23□□□□□ -0.93
CLCNKA-205ENST00000477360 PSG1P11464 419 aa9.23□□□□□ -0.93
CLCNKA-205ENST00000477360 RPL12P30050 165 aaKnown RBP9.23□□□□□ -0.93
CLCNKA-205ENST00000477360 EWSR1Q01844 656 aaKnown RBP eCLIP9.23□□□□□ -0.93
CLCNKA-205ENST00000477360 SLC38A11Q08AI6 406 aa9.23□□□□□ -0.93
CLCNKA-205ENST00000477360 C1orf194Q5T5A4 169 aa9.23□□□□□ -0.93
CLCNKA-205ENST00000477360 ACOT7LQ6ZUV0 252 aa9.23□□□□□ -0.93
CLCNKA-205ENST00000477360 TMEM144Q7Z5S9 345 aa9.23□□□□□ -0.93
CLCNKA-205ENST00000477360 AKAP14Q86UN6 197 aa9.23□□□□□ -0.93
CLCNKA-205ENST00000477360 SPATA25Q9BR10 227 aa9.23□□□□□ -0.93
CLCNKA-205ENST00000477360 NPVFQ9HCQ7 196 aa9.23□□□□□ -0.93
CLCNKA-205ENST00000477360 PAIP2BQ9ULR5 123 aaKnown RBP9.23□□□□□ -0.93
CLCNKA-205ENST00000477360 TNFSF18Q9UNG2 199 aa9.23□□□□□ -0.93
CLCNKA-205ENST00000477360 HSPB11Q9Y547 144 aa9.23□□□□□ -0.93
CLCNKA-205ENST00000477360 IGKV1D-37A0A075B6S9 117 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 IGHV3OR16-8A0A075B7F1 116 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 KIR2DL5BA0A0G2JN68 375 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 KIR2DL5BA0A0G2JPC4 375 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 HMSDA8MTL9 139 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 ZNF207O43670 478 aaKnown RBP9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 CST7O76096 145 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 IL4P05112 153 aa9.22□□□□□ -0.93
CLCNKA-205ENST00000477360 SELENOTP62341 195 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms