RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 LMO4P61968 165 aa9.09□□□□□ -0.95
NUP188-205ENST00000477069 FXYD3Q14802 87 aa9.09□□□□□ -0.95
NUP188-205ENST00000477069 PYY3Q5JQD4 70 aa9.09□□□□□ -0.95
NUP188-205ENST00000477069 CCDC144NLQ6NUI1 221 aa9.09□□□□□ -0.95
NUP188-205ENST00000477069 OSTCQ9NRP0 149 aa9.09□□□□□ -0.95
NUP188-205ENST00000477069 NCOR2Q9Y618 2525 aa9.09□□□□□ -0.95
NUP188-205ENST00000477069 ISLRO14498 428 aa9.09□□□□□ -0.95
NUP188-205ENST00000477069 IGKV1-17P01599 117 aa9.09□□□□□ -0.95
NUP188-205ENST00000477069 PSG1P11464 419 aa9.09□□□□□ -0.95
NUP188-205ENST00000477069 ERVFC1-1P60608 527 aa9.09□□□□□ -0.95
NUP188-205ENST00000477069 PDZD11Q5EBL8 140 aa9.09□□□□□ -0.95
NUP188-205ENST00000477069 NPIPB5A8MRT5 1133 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 PEX7O00628 323 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 S100A2P29034 98 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 SSTP61278 116 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 TIGITQ495A1 244 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 OR1L6Q8NGR2 347 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 LINC00479Q96M42 142 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 TBX15Q96SF7 602 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 HIST1H2BLQ99880 126 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 FAM103A1Q9BTL3 118 aaKnown RBP9.08□□□□□ -0.96
NUP188-205ENST00000477069 ASH1LQ9NR48 2969 aaKnown RBP9.08□□□□□ -0.96
NUP188-205ENST00000477069 NDPQ00604 133 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 RNASE7Q9H1E1 156 aaKnown RBP9.08□□□□□ -0.96
NUP188-205ENST00000477069 NIT2Q9NQR4 276 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 MRPL27Q9P0M9 148 aaKnown RBP9.08□□□□□ -0.96
NUP188-205ENST00000477069 CSMD1Q96PZ7 3565 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 XKRY2A2RUG3 117 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 RPEL1Q2QD12 228 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 ZNF562Q6V9R5 426 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 OR10D4PQ8NGN7 298 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 BPESC1Q9GZL8 116 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 TBL2Q9Y4P3 447 aaKnown RBP9.08□□□□□ -0.96
NUP188-205ENST00000477069 TRAPPC1Q9Y5R8 145 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 CACNA1AO00555 2505 aa9.08□□□□□ -0.96
NUP188-205ENST00000477069 NBASA2RRP1 2371 aa9.07□□□□□ -0.96
NUP188-205ENST00000477069 IGLV11-55A0A075B6I3 123 aa9.07□□□□□ -0.96
NUP188-205ENST00000477069 HES1Q14469 280 aa9.07□□□□□ -0.96
NUP188-205ENST00000477069 ARL6IP6Q8N6S5 226 aa9.07□□□□□ -0.96
NUP188-205ENST00000477069 FANCD2OSQ96PS1 177 aa9.07□□□□□ -0.96
NUP188-205ENST00000477069 C7orf69Q9H7B7 122 aa9.07□□□□□ -0.96
NUP188-205ENST00000477069 TMEM14CQ9P0S9 112 aa9.07□□□□□ -0.96
NUP188-205ENST00000477069 HIGD1AQ9Y241 93 aa9.07□□□□□ -0.96
NUP188-205ENST00000477069 TPRP12270 2363 aaKnown RBP9.07□□□□□ -0.96
NUP188-205ENST00000477069 UBE2E1P51965 193 aa9.07□□□□□ -0.96
NUP188-205ENST00000477069 CX3CL1P78423 397 aa9.07□□□□□ -0.96
NUP188-205ENST00000477069 TMEM183BQ1AE95 376 aa9.07□□□□□ -0.96
NUP188-205ENST00000477069 TTC9CQ8N5M4 171 aa9.07□□□□□ -0.96
NUP188-205ENST00000477069 ZNF48Q96MX3 618 aaPredicted RBP9.07□□□□□ -0.96
NUP188-205ENST00000477069 RASL11BQ9BPW5 248 aa9.07□□□□□ -0.96
NUP188-205ENST00000477069 GSN-AS1Q9NRJ2 163 aa9.07□□□□□ -0.96
NUP188-205ENST00000477069 KLF12Q9Y4X4 402 aa9.07□□□□□ -0.96
NUP188-205ENST00000477069 TOX4O94842 621 aa9.06□□□□□ -0.96
NUP188-205ENST00000477069 NBEAP1P0C6P0 100 aa9.06□□□□□ -0.96
NUP188-205ENST00000477069 FABP4P15090 132 aa9.06□□□□□ -0.96
NUP188-205ENST00000477069 CNN1P51911 297 aaKnown RBP9.06□□□□□ -0.96
NUP188-205ENST00000477069 GNG5P63218 68 aa9.06□□□□□ -0.96
NUP188-205ENST00000477069 LEMD1Q68G75 181 aa9.06□□□□□ -0.96
NUP188-205ENST00000477069 ARPC1AQ92747 370 aa9.06□□□□□ -0.96
NUP188-205ENST00000477069 SLC25A39Q9BZJ4 359 aaPredicted RBP9.06□□□□□ -0.96
NUP188-205ENST00000477069 EPDR1Q9UM22 224 aa9.06□□□□□ -0.96
NUP188-205ENST00000477069 SMIM27A0A1W2PRY6 76 aa9.06□□□□□ -0.96
NUP188-205ENST00000477069 F8W735 103 aaPredicted RBP9.06□□□□□ -0.96
NUP188-205ENST00000477069 IGHV4-39P01824 125 aa9.06□□□□□ -0.96
NUP188-205ENST00000477069 AMBPP02760 352 aa9.06□□□□□ -0.96
NUP188-205ENST00000477069 SNRPCP09234 159 aaKnown RBP9.06□□□□□ -0.96
NUP188-205ENST00000477069 EGR2P11161 476 aaPredicted RBP9.06□□□□□ -0.96
NUP188-205ENST00000477069 LYZP61626 148 aa9.06□□□□□ -0.96
NUP188-205ENST00000477069 RANP62826 216 aaKnown RBP9.06□□□□□ -0.96
NUP188-205ENST00000477069 IBA57Q5T440 356 aaKnown RBP9.06□□□□□ -0.96
NUP188-205ENST00000477069 FAM231DQ6ZW35 169 aa9.06□□□□□ -0.96
NUP188-205ENST00000477069 TOMM40O96008 361 aa9.05□□□□□ -0.96
NUP188-205ENST00000477069 FABP1P07148 127 aa9.05□□□□□ -0.96
NUP188-205ENST00000477069 FRMD6-AS1P0C7T7 363 aa9.05□□□□□ -0.96
NUP188-205ENST00000477069 ADMP35318 185 aa9.05□□□□□ -0.96
NUP188-205ENST00000477069 CDPF1Q6NVV7 123 aa9.05□□□□□ -0.96
NUP188-205ENST00000477069 BLNKQ8WV28 456 aa9.05□□□□□ -0.96
NUP188-205ENST00000477069 MBD6Q96DN6 1003 aa9.05□□□□□ -0.96
NUP188-205ENST00000477069 PACRGQ96M98 296 aaPredicted RBP9.05□□□□□ -0.96
NUP188-205ENST00000477069 POLR3KQ9Y2Y1 108 aaPredicted RBP9.05□□□□□ -0.96
NUP188-205ENST00000477069 VPS13CQ709C8 3753 aa9.05□□□□□ -0.96
NUP188-205ENST00000477069 TRAV34A0A0B4J273 112 aa9.05□□□□□ -0.96
NUP188-205ENST00000477069 HIST1H1BP16401 226 aaKnown RBP9.05□□□□□ -0.96
NUP188-205ENST00000477069 C21orf62-AS1Q17RA5 79 aa9.05□□□□□ -0.96
NUP188-205ENST00000477069 KLF17Q5JT82 389 aaPredicted RBP9.05□□□□□ -0.96
NUP188-205ENST00000477069 OR8I2Q8N0Y5 310 aa9.05□□□□□ -0.96
NUP188-205ENST00000477069 Q8N9W7 124 aa9.05□□□□□ -0.96
NUP188-205ENST00000477069 NHLRC2Q8NBF2 726 aa9.05□□□□□ -0.96
NUP188-205ENST00000477069 WI2-2373I1.2A0A1W2PRP0 233 aa9.04□□□□□ -0.96
NUP188-205ENST00000477069 H3BRN7 92 aa9.04□□□□□ -0.96
NUP188-205ENST00000477069 RD3LP0DJH9 198 aa9.04□□□□□ -0.96
NUP188-205ENST00000477069 TMEM11P17152 192 aa9.04□□□□□ -0.96
NUP188-205ENST00000477069 CBLN1P23435 193 aa9.04□□□□□ -0.96
NUP188-205ENST00000477069 DNLZQ5SXM8 178 aa9.04□□□□□ -0.96
NUP188-205ENST00000477069 ZNF491Q8N8L2 437 aa9.04□□□□□ -0.96
NUP188-205ENST00000477069 SMIM12Q96EX1 92 aa9.04□□□□□ -0.96
NUP188-205ENST00000477069 ZNF586Q9NXT0 402 aa9.04□□□□□ -0.96
NUP188-205ENST00000477069 IGHV7-81A0A0B4J1V7 117 aa9.04□□□□□ -0.96
NUP188-205ENST00000477069 PGPA6NDG6 321 aa9.04□□□□□ -0.96
NUP188-205ENST00000477069 MGST1P10620 155 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms