RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 MGAT4CQ9UBM8 478 aa13.37□□□□□ -0.27
SMIM4-202ENST00000476842 IGHV3OR16-13A0A075B7E8 117 aa13.36□□□□□ -0.27
SMIM4-202ENST00000476842 IGHV3-74A0A0B4J1X5 117 aa13.36□□□□□ -0.27
SMIM4-202ENST00000476842 FAM24AA6NFZ4 105 aa13.36□□□□□ -0.27
SMIM4-202ENST00000476842 DEDDO75618 318 aa13.36□□□□□ -0.27
SMIM4-202ENST00000476842 IL4P05112 153 aa13.36□□□□□ -0.27
SMIM4-202ENST00000476842 CAV2P51636 162 aa13.36□□□□□ -0.27
SMIM4-202ENST00000476842 AKR1C1Q04828 323 aa13.36□□□□□ -0.27
SMIM4-202ENST00000476842 FAM90A2PQ658T7 463 aa13.36□□□□□ -0.27
SMIM4-202ENST00000476842 LILRB2Q8N423 598 aa13.36□□□□□ -0.27
SMIM4-202ENST00000476842 ST8SIA2Q92186 375 aa13.36□□□□□ -0.27
SMIM4-202ENST00000476842 SPAG8Q99932 426 aaPredicted RBP13.36□□□□□ -0.27
SMIM4-202ENST00000476842 TMEM231Q9H6L2 316 aa13.36□□□□□ -0.27
SMIM4-202ENST00000476842 NPVFQ9HCQ7 196 aa13.36□□□□□ -0.27
SMIM4-202ENST00000476842 U3KQE9 123 aa13.36□□□□□ -0.27
SMIM4-202ENST00000476842 CFDP00746 253 aaPredicted RBP13.35□□□□□ -0.27
SMIM4-202ENST00000476842 RRAS2P62070 204 aaPredicted RBP13.35□□□□□ -0.27
SMIM4-202ENST00000476842 OXA1LQ15070 435 aa13.35□□□□□ -0.27
SMIM4-202ENST00000476842 USF2Q15853 346 aaPredicted RBP13.35□□□□□ -0.27
SMIM4-202ENST00000476842 NARS2Q96I59 477 aaKnown RBP13.35□□□□□ -0.27
SMIM4-202ENST00000476842 NEURL2Q9BR09 285 aa13.35□□□□□ -0.27
SMIM4-202ENST00000476842 SMCO3A2RU48 225 aa13.34□□□□□ -0.27
SMIM4-202ENST00000476842 A8MZ25 164 aa13.34□□□□□ -0.27
SMIM4-202ENST00000476842 HNRNPCP07910 306 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMIM4-202ENST00000476842 CD7P09564 240 aa13.34□□□□□ -0.27
SMIM4-202ENST00000476842 CD81P60033 236 aa13.34□□□□□ -0.27
SMIM4-202ENST00000476842 TMEM252Q8N6L7 170 aa13.34□□□□□ -0.27
SMIM4-202ENST00000476842 PPP1R1CQ8WVI7 109 aa13.34□□□□□ -0.27
SMIM4-202ENST00000476842 RNF125Q96EQ8 232 aa13.34□□□□□ -0.27
SMIM4-202ENST00000476842 B9D2Q9BPU9 175 aa13.34□□□□□ -0.27
SMIM4-202ENST00000476842 IGHV3-66A0A0C4DH42 116 aa13.33□□□□□ -0.28
SMIM4-202ENST00000476842 E5RGE8 158 aa13.33□□□□□ -0.28
SMIM4-202ENST00000476842 H0YIZ8 118 aa13.33□□□□□ -0.28
SMIM4-202ENST00000476842 DFFBO76075 338 aa13.33□□□□□ -0.28
SMIM4-202ENST00000476842 CST7O76096 145 aa13.33□□□□□ -0.28
SMIM4-202ENST00000476842 SULT1A1P50225 295 aa13.33□□□□□ -0.28
SMIM4-202ENST00000476842 OR2F1Q13607 317 aa13.33□□□□□ -0.28
SMIM4-202ENST00000476842 TCF24Q7RTU0 167 aa13.33□□□□□ -0.28
SMIM4-202ENST00000476842 MED28Q9H204 178 aa13.33□□□□□ -0.28
SMIM4-202ENST00000476842 RABAC1Q9UI14 185 aa13.33□□□□□ -0.28
SMIM4-202ENST00000476842 IGSF23A1L1A6 192 aa13.32□□□□□ -0.28
SMIM4-202ENST00000476842 OR4C46A6NHA9 309 aa13.32□□□□□ -0.28
SMIM4-202ENST00000476842 IGHV4-30-4P0DP06 118 aa13.32□□□□□ -0.28
SMIM4-202ENST00000476842 CXCL3P19876 107 aa13.32□□□□□ -0.28
SMIM4-202ENST00000476842 S100A11P31949 105 aa13.32□□□□□ -0.28
SMIM4-202ENST00000476842 P2RY1P47900 373 aa13.32□□□□□ -0.28
SMIM4-202ENST00000476842 EIF2B2P49770 351 aaKnown RBP13.32□□□□□ -0.28
SMIM4-202ENST00000476842 SLC38A11Q08AI6 406 aa13.32□□□□□ -0.28
SMIM4-202ENST00000476842 LRRC37A5PQ49AS3 106 aa13.32□□□□□ -0.28
SMIM4-202ENST00000476842 TEPPQ6URK8 271 aa13.32□□□□□ -0.28
SMIM4-202ENST00000476842 C16orf54Q6UWD8 224 aa13.32□□□□□ -0.28
SMIM4-202ENST00000476842 GRAMD2BQ96HH9 432 aa13.32□□□□□ -0.28
SMIM4-202ENST00000476842 RNF126Q9BV68 326 aa13.32□□□□□ -0.28
SMIM4-202ENST00000476842 PBDC1Q9BVG4 233 aa13.32□□□□□ -0.28
SMIM4-202ENST00000476842 C19orf73Q9NVV2 129 aa13.32□□□□□ -0.28
SMIM4-202ENST00000476842 OR5AC2Q9NZP5 309 aa13.32□□□□□ -0.28
SMIM4-202ENST00000476842 PFDN2Q9UHV9 154 aa13.32□□□□□ -0.28
SMIM4-202ENST00000476842 BUB3O43684 328 aa13.31□□□□□ -0.28
SMIM4-202ENST00000476842 MPC2O95563 127 aa13.31□□□□□ -0.28
SMIM4-202ENST00000476842 LYZP61626 148 aa13.31□□□□□ -0.28
SMIM4-202ENST00000476842 SELENOTP62341 195 aa13.31□□□□□ -0.28
SMIM4-202ENST00000476842 PAFAH1B2P68402 229 aa13.31□□□□□ -0.28
SMIM4-202ENST00000476842 TMEM182Q6ZP80 229 aaPredicted RBP13.31□□□□□ -0.28
SMIM4-202ENST00000476842 CYP2G1PQ6ZSU1 146 aa13.31□□□□□ -0.28
SMIM4-202ENST00000476842 STX12Q86Y82 276 aa13.31□□□□□ -0.28
SMIM4-202ENST00000476842 TMEM217Q8N7C4 229 aa13.31□□□□□ -0.28
SMIM4-202ENST00000476842 BPIFCQ8NFQ6 507 aa13.31□□□□□ -0.28
SMIM4-202ENST00000476842 SLC25A31Q9H0C2 315 aa13.31□□□□□ -0.28
SMIM4-202ENST00000476842 DNAH9Q9NYC9 4486 aa13.31□□□□□ -0.28
SMIM4-202ENST00000476842 OR11H12B2RN74 326 aa13.3□□□□□ -0.28
SMIM4-202ENST00000476842 GATA2P23769 480 aaPredicted RBP13.3□□□□□ -0.28
SMIM4-202ENST00000476842 HBG1P69891 147 aa13.3□□□□□ -0.28
SMIM4-202ENST00000476842 HBG2P69892 147 aa13.3□□□□□ -0.28
SMIM4-202ENST00000476842 FCN2Q15485 313 aa13.3□□□□□ -0.28
SMIM4-202ENST00000476842 ATP6V1FQ16864 119 aa13.3□□□□□ -0.28
SMIM4-202ENST00000476842 IGKV3-7A0A075B6H7 116 aa13.29□□□□□ -0.28
SMIM4-202ENST00000476842 FRMD6-AS1P0C7T7 363 aa13.29□□□□□ -0.28
SMIM4-202ENST00000476842 PET100P0DJ07 73 aa13.29□□□□□ -0.28
SMIM4-202ENST00000476842 NUP62P37198 522 aaPredicted RBP13.29□□□□□ -0.28
SMIM4-202ENST00000476842 AP2S1P53680 142 aaPredicted RBP13.29□□□□□ -0.28
SMIM4-202ENST00000476842 VWC2Q2TAL6 325 aa13.29□□□□□ -0.28
SMIM4-202ENST00000476842 DEFB125Q8N687 156 aa13.29□□□□□ -0.28
SMIM4-202ENST00000476842 OR11H7Q8NGC8 314 aa13.29□□□□□ -0.28
SMIM4-202ENST00000476842 GLMPQ8WWB7 406 aa13.29□□□□□ -0.28
SMIM4-202ENST00000476842 MS4A6AQ9H2W1 248 aa13.29□□□□□ -0.28
SMIM4-202ENST00000476842 TUBA4BQ9H853 241 aa13.29□□□□□ -0.28
SMIM4-202ENST00000476842 UQCC1Q9NVA1 299 aa13.29□□□□□ -0.28
SMIM4-202ENST00000476842 SLC45A2Q9UMX9 530 aa13.29□□□□□ -0.28
SMIM4-202ENST00000476842 TRAV2A0A0B4J234 112 aa13.28□□□□□ -0.28
SMIM4-202ENST00000476842 HELTA6NFD8 242 aa13.28□□□□□ -0.28
SMIM4-202ENST00000476842 DNASE2O00115 360 aaPredicted RBP13.28□□□□□ -0.28
SMIM4-202ENST00000476842 CMC4P56277 68 aaPredicted RBP13.28□□□□□ -0.28
SMIM4-202ENST00000476842 RPL11P62913 178 aaKnown RBP13.28□□□□□ -0.28
SMIM4-202ENST00000476842 NHLH2Q02577 135 aa13.28□□□□□ -0.28
SMIM4-202ENST00000476842 GBGT1Q8N5D6 347 aa13.28□□□□□ -0.28
SMIM4-202ENST00000476842 STPG3Q8N7X2 389 aa13.28□□□□□ -0.28
SMIM4-202ENST00000476842 FAM110AQ9BQ89 295 aa13.28□□□□□ -0.28
SMIM4-202ENST00000476842 AGPAT2O15120 278 aa13.27□□□□□ -0.29
SMIM4-202ENST00000476842 NHLRC4P0CG21 123 aaPredicted RBP13.27□□□□□ -0.29
SMIM4-202ENST00000476842 ORM2P19652 201 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms