RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 PSMB3P49720 205 aa7.92□□□□□ -1.14
BRCA1-213ENST00000476777 PAX9P55771 341 aa7.92□□□□□ -1.14
BRCA1-213ENST00000476777 TMEM69Q5SWH9 247 aa7.92□□□□□ -1.14
BRCA1-213ENST00000476777 SPATA31B1PQ5VZV4 182 aa7.92□□□□□ -1.14
BRCA1-213ENST00000476777 LYPD1Q8N2G4 141 aa7.92□□□□□ -1.14
BRCA1-213ENST00000476777 CNBD2Q96M20 576 aa7.92□□□□□ -1.14
BRCA1-213ENST00000476777 TP53RKQ96S44 253 aa7.92□□□□□ -1.14
BRCA1-213ENST00000476777 MAGT1Q9H0U3 335 aa7.92□□□□□ -1.14
BRCA1-213ENST00000476777 A0A0G2JRQ6 117 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 A0A0J9YX75 114 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 TMEM127O75204 238 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 DEFB130BP0DP73 79 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 DEFB130AP0DP74 79 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 PRSS3P35030 304 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 HTR2BP41595 481 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 XGP55808 180 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 GABARAPL2P60520 117 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 RND3P61587 244 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 AARDQ4LEZ3 155 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 UBE2NLQ5JXB2 153 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 SSX7Q7RTT5 188 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 SPARTQ8N0X7 666 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 OR51G1Q8NGK1 321 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 COQ8AQ8NI60 647 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 RNASEH2CQ8TDP1 164 aaKnown RBP7.91□□□□□ -1.14
BRCA1-213ENST00000476777 RNF141Q8WVD5 230 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 TMEM208Q9BTX3 173 aa7.91□□□□□ -1.14
BRCA1-213ENST00000476777 LOC100506127A0A0U1RQW1 187 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 ZNF705GA8MUZ8 300 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-213ENST00000476777 M0QYG6 137 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 ATG12O94817 140 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 PSG1P11464 419 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 PI3P19957 117 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 NUP62P37198 522 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-213ENST00000476777 PIGPP57054 158 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 SPCS3P61009 180 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 C2orf83Q53S99 150 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 TTC32Q5I0X7 151 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 Q5VSD8 79 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 EBLN2Q6P2I7 272 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 AMTNQ6UX39 209 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 GPX8Q8TED1 209 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 TMEM170AQ8WVE7 144 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 NPIPB3Q92617 1050 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 FCGR1BQ92637 280 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 GPR146Q96CH1 333 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 IGF2BP2-AS1Q96M15 143 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 Q9H3A6 140 aa7.9□□□□□ -1.14
BRCA1-213ENST00000476777 C3orf85A0A1B0GTC6 90 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 PLAC8L1A1L4L8 177 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 A8MTW9 85 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 ISLRO14498 428 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 ATP5G1P05496 136 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 PGAM2P15259 253 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 ELK1P19419 428 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 RCVRNP35243 200 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 ATP5G3P48201 142 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 DLK1P80370 383 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 CLINT1Q14677 625 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 FCN2Q15485 313 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 ETFRF1Q6IPR1 90 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 SAMD12Q8N8I0 201 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 SLC24A4Q8NFF2 622 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 OR52E5Q8NH55 327 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 RNF125Q96EQ8 232 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 ZNF486Q96H40 463 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-213ENST00000476777 ACY3Q96HD9 319 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 C20orf173Q96LM9 149 aa7.89□□□□□ -1.15
BRCA1-213ENST00000476777 HEYLQ9NQ87 328 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-213ENST00000476777 A0A1W2PPQ1 181 aa7.88□□□□□ -1.15
BRCA1-213ENST00000476777 TSPOP30536 169 aa7.88□□□□□ -1.15
BRCA1-213ENST00000476777 TRIM16LQ309B1 348 aa7.88□□□□□ -1.15
BRCA1-213ENST00000476777 SP6Q3SY56 376 aa7.88□□□□□ -1.15
BRCA1-213ENST00000476777 C1orf194Q5T5A4 169 aa7.88□□□□□ -1.15
BRCA1-213ENST00000476777 OR8G2PQ6IF36 304 aa7.88□□□□□ -1.15
BRCA1-213ENST00000476777 OR4C16Q8NGL9 310 aa7.88□□□□□ -1.15
BRCA1-213ENST00000476777 RRNAD1Q96FB5 475 aaKnown RBP7.88□□□□□ -1.15
BRCA1-213ENST00000476777 ABHD1Q96SE0 405 aa7.88□□□□□ -1.15
BRCA1-213ENST00000476777 PBDC1Q9BVG4 233 aa7.88□□□□□ -1.15
BRCA1-213ENST00000476777 DOK5Q9P104 306 aa7.88□□□□□ -1.15
BRCA1-213ENST00000476777 UBR4Q5T4S7 5183 aa7.88□□□□□ -1.15
BRCA1-213ENST00000476777 CBY3A6NI87 242 aa7.87□□□□□ -1.15
BRCA1-213ENST00000476777 CRXO43186 299 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-213ENST00000476777 AZU1P20160 251 aa7.87□□□□□ -1.15
BRCA1-213ENST00000476777 UCP1P25874 307 aa7.87□□□□□ -1.15
BRCA1-213ENST00000476777 SUPT4H1P63272 117 aaKnown RBP7.87□□□□□ -1.15
BRCA1-213ENST00000476777 IZUMO2Q6UXV1 221 aa7.87□□□□□ -1.15
BRCA1-213ENST00000476777 LHFPL1Q86WI0 220 aa7.87□□□□□ -1.15
BRCA1-213ENST00000476777 FRZBQ92765 325 aa7.87□□□□□ -1.15
BRCA1-213ENST00000476777 UPK3BQ9BT76 320 aa7.87□□□□□ -1.15
BRCA1-213ENST00000476777 RPRMQ9NS64 109 aa7.87□□□□□ -1.15
BRCA1-213ENST00000476777 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-213ENST00000476777 PGPEP1Q9NXJ5 209 aa7.87□□□□□ -1.15
BRCA1-213ENST00000476777 PFDN2Q9UHV9 154 aa7.87□□□□□ -1.15
BRCA1-213ENST00000476777 M0R2Z0 102 aa7.86□□□□□ -1.15
BRCA1-213ENST00000476777 INSP01308 110 aa7.86□□□□□ -1.15
BRCA1-213ENST00000476777 FUSP35637 526 aaKnown RBP eCLIP7.86□□□□□ -1.15
BRCA1-213ENST00000476777 B2MP61769 119 aa7.86□□□□□ -1.15
BRCA1-213ENST00000476777 SPINK13Q1W4C9 94 aa7.86□□□□□ -1.15
BRCA1-213ENST00000476777 Q6ZRN7 208 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms