RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 TNFAIP8O95379 198 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 TOMM40O96008 361 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 OR5AC1P0C628 307 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 UCP1P25874 307 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 AP2S1P53680 142 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-219ENST00000476625 KRTAP10-2P60368 255 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 NCS1P62166 190 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 ZNF90Q03938 601 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 ZNF79Q15937 498 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 C2orf83Q53S99 150 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 FAM78BQ5VT40 261 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 IGFL4Q6B9Z1 124 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 C6orf223Q8N319 242 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 ARRDC1Q8N5I2 433 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 SLC24A4Q8NFF2 622 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 KRTAP1-5Q9BYS1 174 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 VCX3AQ9NNX9 186 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 HERC1Q15751 4861 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 IGKV1D-37A0A075B6S9 117 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 RPS10-NUDT3A0A1W2PQS6 291 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 SMIM9A6NGZ8 99 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 CEBPZOSA8MTT3 80 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 NUDT3O95989 172 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 HBE1P02100 147 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 RD3LP0DJH9 198 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 HTR2BP41595 481 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 SPCS3P61009 180 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 SCGB2B2Q4G0G5 96 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 FOXI2Q6ZQN5 318 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 SELENOHQ8IZQ5 122 aaKnown RBP8.39□□□□□ -1.07
HDAC6-219ENST00000476625 OR52I2Q8NH67 350 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 RNF125Q96EQ8 232 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 RRNAD1Q96FB5 475 aaKnown RBP8.39□□□□□ -1.07
HDAC6-219ENST00000476625 FAM210BQ96KR6 192 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 C17orf77Q96MU5 243 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 ATG101Q9BSB4 218 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 TMED3Q9Y3Q3 217 aa8.39□□□□□ -1.07
HDAC6-219ENST00000476625 A0A087WXM4 84 aa8.38□□□□□ -1.07
HDAC6-219ENST00000476625 M0R2Z0 102 aa8.38□□□□□ -1.07
HDAC6-219ENST00000476625 SCGB2A1O75556 95 aa8.38□□□□□ -1.07
HDAC6-219ENST00000476625 DEFB130BP0DP73 79 aa8.38□□□□□ -1.07
HDAC6-219ENST00000476625 DEFB130AP0DP74 79 aa8.38□□□□□ -1.07
HDAC6-219ENST00000476625 SLC25A4P12235 298 aa8.38□□□□□ -1.07
HDAC6-219ENST00000476625 AZU1P20160 251 aa8.38□□□□□ -1.07
HDAC6-219ENST00000476625 PSG9Q00887 426 aa8.38□□□□□ -1.07
HDAC6-219ENST00000476625 OR2F1Q13607 317 aa8.38□□□□□ -1.07
HDAC6-219ENST00000476625 RRN3P1Q2M238 152 aa8.38□□□□□ -1.07
HDAC6-219ENST00000476625 RNASE10Q5GAN6 216 aaKnown RBP8.38□□□□□ -1.07
HDAC6-219ENST00000476625 AMTNQ6UX39 209 aa8.38□□□□□ -1.07
HDAC6-219ENST00000476625 COQ8AQ8NI60 647 aa8.38□□□□□ -1.07
HDAC6-219ENST00000476625 SCPEP1Q9HB40 452 aa8.38□□□□□ -1.07
HDAC6-219ENST00000476625 COPZ2Q9P299 210 aa8.38□□□□□ -1.07
HDAC6-219ENST00000476625 GOLT1BQ9Y3E0 138 aa8.38□□□□□ -1.07
HDAC6-219ENST00000476625 LINC00588Q9Y4M8 146 aa8.38□□□□□ -1.07
HDAC6-219ENST00000476625 A0A0J9YX75 114 aa8.37□□□□□ -1.07
HDAC6-219ENST00000476625 PSMB3P49720 205 aa8.37□□□□□ -1.07
HDAC6-219ENST00000476625 LYZP61626 148 aa8.37□□□□□ -1.07
HDAC6-219ENST00000476625 VBP1P61758 197 aa8.37□□□□□ -1.07
HDAC6-219ENST00000476625 DLK1P80370 383 aa8.37□□□□□ -1.07
HDAC6-219ENST00000476625 OXA1LQ15070 435 aa8.37□□□□□ -1.07
HDAC6-219ENST00000476625 SPINK13Q1W4C9 94 aa8.37□□□□□ -1.07
HDAC6-219ENST00000476625 AARDQ4LEZ3 155 aa8.37□□□□□ -1.07
HDAC6-219ENST00000476625 CROCCP3Q8IVE0 287 aa8.37□□□□□ -1.07
HDAC6-219ENST00000476625 GLYATL2Q8WU03 294 aa8.37□□□□□ -1.07
HDAC6-219ENST00000476625 ZNF486Q96H40 463 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-219ENST00000476625 UHRF2Q96PU4 802 aa8.37□□□□□ -1.07
HDAC6-219ENST00000476625 RTBDNQ9BSG5 229 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-219ENST00000476625 MAGT1Q9H0U3 335 aa8.37□□□□□ -1.07
HDAC6-219ENST00000476625 SEPSECSQ9HD40 501 aaKnown RBP8.37□□□□□ -1.07
HDAC6-219ENST00000476625 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-219ENST00000476625 TRAV12-2A0A075B6T6 113 aa8.36□□□□□ -1.07
HDAC6-219ENST00000476625 PLAC8L1A1L4L8 177 aa8.36□□□□□ -1.07
HDAC6-219ENST00000476625 FAM25AB3EWG3 89 aa8.36□□□□□ -1.07
HDAC6-219ENST00000476625 FAM25CB3EWG5 89 aa8.36□□□□□ -1.07
HDAC6-219ENST00000476625 FAM25GB3EWG6 89 aa8.36□□□□□ -1.07
HDAC6-219ENST00000476625 F5H768 121 aa8.36□□□□□ -1.07
HDAC6-219ENST00000476625 CRXO43186 299 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-219ENST00000476625 CDS2O95674 445 aa8.36□□□□□ -1.07
HDAC6-219ENST00000476625 APOA1P02647 267 aa8.36□□□□□ -1.07
HDAC6-219ENST00000476625 NMSQ5H8A3 153 aa8.36□□□□□ -1.07
HDAC6-219ENST00000476625 TMEM268Q5VZI3 342 aa8.36□□□□□ -1.07
HDAC6-219ENST00000476625 BAP18Q8IXM2 172 aa8.36□□□□□ -1.07
HDAC6-219ENST00000476625 OR52E5Q8NH55 327 aa8.36□□□□□ -1.07
HDAC6-219ENST00000476625 RNASEH2CQ8TDP1 164 aaKnown RBP8.36□□□□□ -1.07
HDAC6-219ENST00000476625 RNF141Q8WVD5 230 aa8.36□□□□□ -1.07
HDAC6-219ENST00000476625 ABHD1Q96SE0 405 aa8.36□□□□□ -1.07
HDAC6-219ENST00000476625 TMEM222Q9H0R3 208 aa8.36□□□□□ -1.07
HDAC6-219ENST00000476625 NAA60Q9H7X0 242 aa8.36□□□□□ -1.07
HDAC6-219ENST00000476625 TEX13DA0A0J9YY54 714 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-219ENST00000476625 SMIM31A0A1B0GVY4 71 aa8.35□□□□□ -1.07
HDAC6-219ENST00000476625 GSTZ1O43708 216 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-219ENST00000476625 TMEM127O75204 238 aa8.35□□□□□ -1.07
HDAC6-219ENST00000476625 PAX9P55771 341 aa8.35□□□□□ -1.07
HDAC6-219ENST00000476625 RNF182Q8N6D2 247 aa8.35□□□□□ -1.07
HDAC6-219ENST00000476625 CCDC71LQ8N9Z2 235 aa8.35□□□□□ -1.07
HDAC6-219ENST00000476625 TMEM208Q9BTX3 173 aa8.35□□□□□ -1.07
HDAC6-219ENST00000476625 SLC25A32Q9H2D1 315 aa8.35□□□□□ -1.07
HDAC6-219ENST00000476625 RBKSQ9H477 322 aa8.35□□□□□ -1.07
HDAC6-219ENST00000476625 TEX48A0A1B0GUV7 120 aa8.34□□□□□ -1.07
HDAC6-219ENST00000476625 ZFP92A6NM28 416 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms