RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 PAFAH1B2P68402 229 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 ATP6V1FQ16864 119 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 S100A7AQ86SG5 101 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 LRTM2Q8N967 370 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 Q8NA96 180 aa4.08□□□□□ -1.76
CCDC39-204ENST00000476379 PPIAL4EA0A075B759 164 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 K7ENP7 123 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 CA11O75493 328 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 IL4P05112 153 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 PPIAL4FP0DN26 164 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 EVI2AP22794 236 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 CA7P43166 264 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 LY6EQ16553 131 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 VMA21Q3ZAQ7 101 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 Q6ZWC4 215 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 ZNF295-AS1Q8N0V1 137 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 OR52E5Q8NH55 327 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 RBM14Q96PK6 669 aaKnown RBP4.07□□□□□ -1.76
CCDC39-204ENST00000476379 RASL11BQ9BPW5 248 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 CHRDL1Q9BU40 450 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 NDUFAF3Q9BU61 184 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 PKIBQ9C010 78 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 TMEM106BQ9NUM4 274 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 HSPB7Q9UBY9 170 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 FBXL7Q9UJT9 491 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 MGAM2Q2M2H8 2515 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 H7C2G1 150 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 DNPH1O43598 174 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 PFN1P07737 140 aaKnown RBP4.07□□□□□ -1.76
CCDC39-204ENST00000476379 ADH4P08319 380 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 SUB1P53999 127 aaKnown RBP eCLIP4.07□□□□□ -1.76
CCDC39-204ENST00000476379 C10orf91Q5T1B1 145 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 TMEM14EPQ6UXP3 125 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 C5orf17Q8NAS9 161 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 OR1L8Q8NGR8 309 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 TMEM170AQ8WVE7 144 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 CHRNA10Q9GZZ6 450 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 A0A087X0K7 114 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 E7EUB6 86 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.07□□□□□ -1.76
CCDC39-204ENST00000476379 TNFRSF1AP19438 455 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 LMO1P25800 156 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 LOXL3P58215 753 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 PRSS57Q6UWY2 283 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 OTOGQ6ZRI0 2925 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 Q71RC1 249 aaPredicted RBP4.07□□□□□ -1.76
CCDC39-204ENST00000476379 SSC4DQ8WTU2 575 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 PSMG3Q9BT73 122 aaPredicted RBP4.07□□□□□ -1.76
CCDC39-204ENST00000476379 SCRT1Q9BWW7 348 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 PARD6GQ9BYG4 376 aaPredicted RBP4.07□□□□□ -1.76
CCDC39-204ENST00000476379 TMEM250H0YL14 139 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 C16orf97H3BN30 126 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 K7EN84 100 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 LEPROTL1O95214 131 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 C8orf88P0DMB2 117 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 BTF3P20290 206 aaKnown RBP4.07□□□□□ -1.76
CCDC39-204ENST00000476379 RIPPLY3P57055 190 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 RPL15P61313 204 aaKnown RBP4.07□□□□□ -1.76
CCDC39-204ENST00000476379 SLAQ13239 276 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 C1orf229Q6ZS94 237 aaPredicted RBP4.07□□□□□ -1.76
CCDC39-204ENST00000476379 LINC00173Q6ZV60 143 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 GBGT1Q8N5D6 347 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 TMEM75Q8N9X5 138 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 SPSB4Q96A44 273 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 RITA1Q96K30 269 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 WDR83OSQ9Y284 106 aa4.07□□□□□ -1.76
CCDC39-204ENST00000476379 GGCTO75223 188 aaKnown RBP4.06□□□□□ -1.76
CCDC39-204ENST00000476379 IGLV2-14P01704 120 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 IGHV3-11P01762 117 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 RPL27AP46776 148 aaKnown RBP4.06□□□□□ -1.76
CCDC39-204ENST00000476379 MZT1Q08AG7 82 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 TWIST1Q15672 202 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 ZNF474Q6S9Z5 364 aaPredicted RBP4.06□□□□□ -1.76
CCDC39-204ENST00000476379 GP6Q9HCN6 339 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 ELOVL5Q9NYP7 299 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 DSCAMO60469 2012 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 A8MWP6 167 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 FOLR2P14207 255 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 SAXO1Q8IYX7 474 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 TEX45Q8NA69 505 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 Q8TCH9 128 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 P2RX4Q99571 388 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 ZNF430Q9H8G1 570 aaPredicted RBP4.06□□□□□ -1.76
CCDC39-204ENST00000476379 KCNIP2Q9NS61 270 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 PIGBOS1A0A0B4J2F0 54 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 C7orf71A4D174 169 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 OR2T8A6NH00 312 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 GGTLC3B5MD39 225 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 IGHV1-46P01743 117 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 NBEAP1P0C6P0 100 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 C3orf79P0CE67 100 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 CCKARP32238 428 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 LCN2P80188 198 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 DAZAP2Q15038 168 aaPredicted RBP4.06□□□□□ -1.76
CCDC39-204ENST00000476379 LURAP1LQ8IV03 231 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 MBD3L1Q8WWY6 194 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 C17orf77Q96MU5 243 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 DUX5Q96PT3 197 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 TMEM208Q9BTX3 173 aa4.06□□□□□ -1.76
CCDC39-204ENST00000476379 GAL3ST2Q9H3Q3 398 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms