RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 SSX3Q99909 188 aa4.03□□□□□ -1.76
SSR3-206ENST00000476217 ZNF471Q9BX82 626 aaPredicted RBP4.03□□□□□ -1.76
SSR3-206ENST00000476217 SMIM3Q9BZL3 60 aa4.03□□□□□ -1.76
SSR3-206ENST00000476217 ZNF430Q9H8G1 570 aaPredicted RBP4.03□□□□□ -1.76
SSR3-206ENST00000476217 SIGLEC9Q9Y336 463 aa4.03□□□□□ -1.76
SSR3-206ENST00000476217 STRAPQ9Y3F4 350 aaKnown RBP4.03□□□□□ -1.76
SSR3-206ENST00000476217 CENPEQ02224 2701 aa4.03□□□□□ -1.76
SSR3-206ENST00000476217 MDFIC2A0A1B0GVS7 189 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 H3BUX3 64 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 UBE2CO00762 179 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 TAAR5O14804 337 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 CD5LO43866 347 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 NDUFA3O95167 84 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 TMEM50AO95807 157 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 CA2P00918 260 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 IFNA4P05014 189 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 NPY1RP25929 384 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 MAS1LP35410 378 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 SRP14P37108 136 aaKnown RBP4.02□□□□□ -1.77
SSR3-206ENST00000476217 SNCAP37840 140 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 SULT1A1P50225 295 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 DYNLT3P51808 116 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 RAB11AP62491 216 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 UBA52P62987 128 aaKnown RBP4.02□□□□□ -1.77
SSR3-206ENST00000476217 EIF5AP63241 154 aaKnown RBP4.02□□□□□ -1.77
SSR3-206ENST00000476217 ERHP84090 104 aaKnown RBP4.02□□□□□ -1.77
SSR3-206ENST00000476217 CLINT1Q14677 625 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 LY6EQ16553 131 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 C5orf64Q2M2E5 130 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 SLC25A24Q6NUK1 477 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 C16orf54Q6UWD8 224 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 IL17RELQ6ZVW7 336 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 SLC51BQ86UW2 128 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 Q8N6K4 173 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 TMEM252Q8N6L7 170 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 NPBQ8NG41 125 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 OR1S2Q8NGQ3 325 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 OR5C1Q8NGR4 320 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 OR4C12Q96R67 309 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 VGLL1Q99990 258 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 RASL11BQ9BPW5 248 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 PYGO2Q9BRQ0 406 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 C11orf1Q9H5F2 150 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 YAE1D1Q9NRH1 226 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 PITPNC1Q9UKF7 332 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 MOB4Q9Y3A3 225 aa4.02□□□□□ -1.77
SSR3-206ENST00000476217 SOX21Q9Y651 276 aaPredicted RBP4.02□□□□□ -1.77
SSR3-206ENST00000476217 ASH1LQ9NR48 2969 aaKnown RBP4.01□□□□□ -1.77
SSR3-206ENST00000476217 POLQO75417 2590 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 ABCA12Q86UK0 2595 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 UBE2L5PA0A1B0GUS4 154 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 SMCO3A2RU48 225 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 IFNA7P01567 189 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 IFNA5P01569 189 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 REG1AP05451 166 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 CRYGBP07316 175 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 APELAP0DMC3 54 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 OR13C7P0DN81 318 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 TPT1P13693 172 aaKnown RBP4.01□□□□□ -1.77
SSR3-206ENST00000476217 HTR2BP41595 481 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 VDAC2P45880 294 aaPredicted RBP4.01□□□□□ -1.77
SSR3-206ENST00000476217 SLC38A11Q08AI6 406 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 EBI3Q14213 229 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 ZNF266Q14584 549 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 FXYD3Q14802 87 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 DEFB112Q30KQ8 113 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 RPL7L1Q6DKI1 246 aaKnown RBP4.01□□□□□ -1.77
SSR3-206ENST00000476217 TMEM14EPQ6UXP3 125 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 OR10P1Q8NGE3 313 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 OR10W1Q8NGF6 305 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 SRSF12Q8WXF0 261 aaKnown RBP4.01□□□□□ -1.77
SSR3-206ENST00000476217 ARPC1AQ92747 370 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 PINX1Q96BK5 328 aaKnown RBP4.01□□□□□ -1.77
SSR3-206ENST00000476217 RBM14Q96PK6 669 aaKnown RBP4.01□□□□□ -1.77
SSR3-206ENST00000476217 ATP5SQ99766 215 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 PARP11Q9NR21 331 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 NDUFA4L2Q9NRX3 87 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 TNFRSF19Q9NS68 423 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 U3KQ87 197 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 PTPN13Q12923 2485 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 NAV2Q8IVL1 2488 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 CSMD2Q7Z408 3487 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 SPG11Q96JI7 2443 aa4.01□□□□□ -1.77
SSR3-206ENST00000476217 IGLC7A0M8Q6 106 aa4□□□□□ -1.77
SSR3-206ENST00000476217 A6NDX4 124 aa4□□□□□ -1.77
SSR3-206ENST00000476217 E7EUB6 86 aa4□□□□□ -1.77
SSR3-206ENST00000476217 M0QZK8 103 aa4□□□□□ -1.77
SSR3-206ENST00000476217 FCN1O00602 326 aa4□□□□□ -1.77
SSR3-206ENST00000476217 CYB5BO43169 146 aa4□□□□□ -1.77
SSR3-206ENST00000476217 FGF16O43320 207 aa4□□□□□ -1.77
SSR3-206ENST00000476217 HLA-DRB1P01911 266 aa4□□□□□ -1.77
SSR3-206ENST00000476217 DEFA4P12838 97 aa4□□□□□ -1.77
SSR3-206ENST00000476217 AREGP15514 252 aa4□□□□□ -1.77
SSR3-206ENST00000476217 SUB1P53999 127 aaKnown RBP eCLIP4□□□□□ -1.772e-10■■■■□ 25.7
SSR3-206ENST00000476217 IFITM2Q01629 132 aa4□□□□□ -1.77
SSR3-206ENST00000476217 WT1-ASQ06250 92 aa4□□□□□ -1.77
SSR3-206ENST00000476217 SRSF9Q13242 221 aaKnown RBP eCLIP4□□□□□ -1.77
SSR3-206ENST00000476217 SCGB2A2Q13296 93 aa4□□□□□ -1.77
SSR3-206ENST00000476217 EXOSC2Q13868 293 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms