RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 M0R233 179 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 KPNA4O00629 521 aaPredicted RBP2.03□□□□□ -2.08
PTCD3-211ENST00000476215 TCF21O43680 179 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 EDF1O60869 148 aaKnown RBP2.03□□□□□ -2.08
PTCD3-211ENST00000476215 SHOX2O60902 331 aaPredicted RBP2.03□□□□□ -2.08
PTCD3-211ENST00000476215 SNAP29O95721 258 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 IFNA14P01570 189 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 OPN1SWP03999 348 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 ZNF22P17026 224 aaPredicted RBP2.03□□□□□ -2.08
PTCD3-211ENST00000476215 KDELR2P33947 212 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 GUCA1AP43080 201 aaPredicted RBP2.03□□□□□ -2.08
PTCD3-211ENST00000476215 OR1E2P47887 323 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 NCALDP61601 193 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 SELENOWP63302 87 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 HBG1P69891 147 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 HBG2P69892 147 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 CCL8P80075 99 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 PSG4Q00888 419 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 RPL18Q07020 188 aaKnown RBP2.03□□□□□ -2.08
PTCD3-211ENST00000476215 BAXQ07812 192 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 TBC1D28Q2M2D7 210 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 SLC36A2Q495M3 483 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 COQ5Q5HYK3 327 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 PABPC1L2AQ5JQF8 200 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 C10orf128Q5T292 105 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 FAM27BQ5VT28 67 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 C1orf174Q8IYL3 243 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 LRRC18Q8N456 261 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 OR8J3Q8NGG0 315 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 PFN4Q8NHR9 129 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 CLDND2Q8NHS1 167 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 LRRC20Q8TCA0 184 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 TMEM239Q8WW34 195 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 DYDC1Q8WWB3 177 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 RASSF5Q8WWW0 418 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 TSPAN32Q96QS1 320 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 SIKE1Q9BRV8 207 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 SUCNR1Q9BXA5 334 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 PRRG3Q9BZD7 231 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 BCL2L14Q9BZR8 327 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 SAR1AQ9NR31 198 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 GID8Q9NWU2 228 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 CMTM6Q9NX76 183 aa2.03□□□□□ -2.08
PTCD3-211ENST00000476215 A0A087WUU8 490 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 IGKV1D-43A0A0B4J1Z2 117 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 IGHV1-69-2A0A0G2JMI3 117 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 EFCAB9A8MZ26 197 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 J3QLI3 93 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 FXYD1O00168 92 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 MRASO14807 208 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 PDCD6O75340 191 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 CA2P00918 260 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 MSMBP08118 114 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 CST2P09228 141 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 IFI30P13284 250 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 TAS2R41P59536 307 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 PCBD1P61457 104 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 ERVS71-1P61550 626 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 TRAM1Q15629 374 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 CEACAM21Q3KPI0 293 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 SPRNQ5BIV9 151 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 LRRC28Q86X40 367 aaPredicted RBP2.02□□□□□ -2.09
PTCD3-211ENST00000476215 CLDN22Q8N7P3 220 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 FER1L6-AS1Q8NA97 138 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 OR10D4PQ8NGN7 298 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 OR4A5Q8NH83 315 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 SLC25A40Q8TBP6 338 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 ZNF418Q8TF45 676 aaPredicted RBP2.02□□□□□ -2.09
PTCD3-211ENST00000476215 LZICQ8WZA0 190 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 CMBLQ96DG6 245 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 REEP6Q96HR9 211 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 HOPXQ9BPY8 73 aaPredicted RBP2.02□□□□□ -2.09
PTCD3-211ENST00000476215 OR2H1Q9GZK4 316 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 OR2J1Q9GZK6 312 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 OR51B6Q9H340 312 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 METTL17Q9H7H0 456 aaPredicted RBP2.02□□□□□ -2.09
PTCD3-211ENST00000476215 EFCAB1Q9HAE3 211 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 NMNAT1Q9HAN9 279 aaPredicted RBP2.02□□□□□ -2.09
PTCD3-211ENST00000476215 POMPQ9Y244 141 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 MED31Q9Y3C7 131 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 ARHGAP32A7KAX9 2087 aa2.02□□□□□ -2.09
PTCD3-211ENST00000476215 TRAV27A0A087WT01 109 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 A0A1B0GTI1 187 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 A0A1B0GW15 77 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 OR6C6A6NF89 314 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 BBIP1A8MTZ0 92 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 CLDN25C9JDP6 229 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 G3V3Q6 166 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 TRAPPC2LH3BP13 241 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 H3BSA7 217 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 CXCR6O00574 342 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 CDC42EP2O14613 210 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 SH2D1AO60880 128 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 ZNF682O95780 498 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 CD14P08571 375 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 COX5BP10606 129 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 COX4I1P13073 169 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 CBX5P45973 191 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 UBE2KP61086 200 aa2.01□□□□□ -2.09
PTCD3-211ENST00000476215 PSME3P61289 254 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms