RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 TMEM268Q5VZI3 342 aa7.75□□□□□ -1.17
CDRT1-205ENST00000475944 SELENOHQ8IZQ5 122 aaKnown RBP7.75□□□□□ -1.17
CDRT1-205ENST00000475944 OR51G1Q8NGK1 321 aa7.75□□□□□ -1.17
CDRT1-205ENST00000475944 GPR146Q96CH1 333 aa7.75□□□□□ -1.17
CDRT1-205ENST00000475944 SCRT1Q9BWW7 348 aa7.75□□□□□ -1.17
CDRT1-205ENST00000475944 RFNGQ9Y644 331 aa7.75□□□□□ -1.17
CDRT1-205ENST00000475944 KIAA1109Q2LD37 5005 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 DISC1C4P0D8 188 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 GABARAPH6UMI1 98 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 NXPH3O95157 252 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 GABARAPO95166 117 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 IGKV3-20P01619 116 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 ZNF182P17025 639 aaPredicted RBP7.74□□□□□ -1.17
CDRT1-205ENST00000475944 ID1P41134 155 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 EMP1P54849 157 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 MRPS10P82664 201 aaKnown RBP7.74□□□□□ -1.17
CDRT1-205ENST00000475944 SSBP1Q04837 148 aaKnown RBP7.74□□□□□ -1.17
CDRT1-205ENST00000475944 NMSQ5H8A3 153 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 SOHLH1Q5JUK2 328 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 OR8G2PQ6IF36 304 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 FOXI2Q6ZQN5 318 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 COQ8AQ8NI60 647 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 TMEM170AQ8WVE7 144 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 RNF125Q96EQ8 232 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 CLUHP3Q96NS8 147 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 NIPSNAP3BQ9BS92 247 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 RTBDNQ9BSG5 229 aaPredicted RBP7.74□□□□□ -1.17
CDRT1-205ENST00000475944 PBDC1Q9BVG4 233 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 SAV1Q9H4B6 383 aaPredicted RBP7.74□□□□□ -1.17
CDRT1-205ENST00000475944 U3KQ87 197 aa7.74□□□□□ -1.17
CDRT1-205ENST00000475944 IGLV2-18A0A075B6J9 118 aa7.73□□□□□ -1.17
CDRT1-205ENST00000475944 CRYM-AS1A6NIL9 109 aa7.73□□□□□ -1.17
CDRT1-205ENST00000475944 SULT1A3P0DMM9 295 aa7.73□□□□□ -1.17
CDRT1-205ENST00000475944 SULT1A4P0DMN0 295 aa7.73□□□□□ -1.17
CDRT1-205ENST00000475944 PSMB3P49720 205 aa7.73□□□□□ -1.17
CDRT1-205ENST00000475944 FXYD7P58549 80 aa7.73□□□□□ -1.17
CDRT1-205ENST00000475944 KLF9Q13886 244 aaPredicted RBP7.73□□□□□ -1.17
CDRT1-205ENST00000475944 GDF5OSQ5U4N7 250 aa7.73□□□□□ -1.17
CDRT1-205ENST00000475944 SPATA31B1PQ5VZV4 182 aa7.73□□□□□ -1.17
CDRT1-205ENST00000475944 FAAP20Q6NZ36 180 aa7.73□□□□□ -1.17
CDRT1-205ENST00000475944 IL22RA2Q969J5 263 aa7.73□□□□□ -1.17
CDRT1-205ENST00000475944 LINC00052Q96N35 136 aa7.73□□□□□ -1.17
CDRT1-205ENST00000475944 DKK2Q9UBU2 259 aa7.73□□□□□ -1.17
CDRT1-205ENST00000475944 KCNIP3Q9Y2W7 256 aa7.73□□□□□ -1.17
CDRT1-205ENST00000475944 GOLT1BQ9Y3E0 138 aa7.73□□□□□ -1.17
CDRT1-205ENST00000475944 TMEM56-RWDD3S4R434 201 aa7.73□□□□□ -1.17
CDRT1-205ENST00000475944 ZFP92A6NM28 416 aa7.72□□□□□ -1.17
CDRT1-205ENST00000475944 HBE1P02100 147 aa7.72□□□□□ -1.17
CDRT1-205ENST00000475944 FABP1P07148 127 aa7.72□□□□□ -1.17
CDRT1-205ENST00000475944 SUPT4H1P63272 117 aaKnown RBP7.72□□□□□ -1.17
CDRT1-205ENST00000475944 OXA1LQ15070 435 aa7.72□□□□□ -1.17
CDRT1-205ENST00000475944 RNF212Q495C1 297 aa7.72□□□□□ -1.17
CDRT1-205ENST00000475944 C1orf194Q5T5A4 169 aa7.72□□□□□ -1.17
CDRT1-205ENST00000475944 FAM222AQ5U5X8 452 aa7.72□□□□□ -1.17
CDRT1-205ENST00000475944 Q6ZR54 194 aa7.72□□□□□ -1.17
CDRT1-205ENST00000475944 ZNF709Q8N972 641 aa7.72□□□□□ -1.17
CDRT1-205ENST00000475944 OR4B1Q8NGF8 309 aa7.72□□□□□ -1.17
CDRT1-205ENST00000475944 DTD1Q8TEA8 209 aa7.72□□□□□ -1.17
CDRT1-205ENST00000475944 GPR132Q9UNW8 380 aa7.72□□□□□ -1.17
CDRT1-205ENST00000475944 FAT2Q9NYQ8 4349 aa7.72□□□□□ -1.17
CDRT1-205ENST00000475944 PCLOQ9Y6V0 5065 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 RGS5O15539 181 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 AKAIN1P0CW23 69 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 HTN3P15516 51 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 CCR6P51684 374 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 ATP5IP56385 69 aaPredicted RBP7.71□□□□□ -1.18
CDRT1-205ENST00000475944 DEFB1P60022 68 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 LYZP61626 148 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 PSG9Q00887 426 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 ZNF79Q15937 498 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 SAMD13Q5VXD3 122 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 EBLN2Q6P2I7 272 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 LGI3Q8N145 548 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 SMIM4Q8WVI0 70 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 SLC35E1Q96K37 410 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 PRRT1Q99946 306 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 C7orf50Q9BRJ6 194 aaKnown RBP7.71□□□□□ -1.18
CDRT1-205ENST00000475944 WDR12Q9GZL7 423 aaKnown RBP7.71□□□□□ -1.18
CDRT1-205ENST00000475944 SLC35B3Q9H1N7 401 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 HSPB7Q9UBY9 170 aa7.71□□□□□ -1.18
CDRT1-205ENST00000475944 DNAH2Q9P225 4427 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 A0A0B4J2A0 478 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 LOC102723971A0A1B0GUV8 181 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 SNRPGP15A8MWD9 76 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 ISLRO14498 428 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 SOCS3O14543 225 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 GPX4P36969 197 aaPredicted RBP7.7□□□□□ -1.18
CDRT1-205ENST00000475944 MEOX2P50222 304 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 PAX9P55771 341 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 DAD1P61803 113 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 ZNF90Q03938 601 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 GAMTQ14353 236 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 SMCO1Q147U7 214 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 CTF1Q16619 201 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 RRN3P1Q2M238 152 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 FAM78BQ5VT40 261 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 OR4C16Q8NGL9 310 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 PPP1R14BQ96C90 147 aa7.7□□□□□ -1.18
CDRT1-205ENST00000475944 NAA50Q9GZZ1 169 aaKnown RBP7.7□□□□□ -1.18
CDRT1-205ENST00000475944 MIXL1Q9H2W2 232 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms