RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 OR5A1Q8NGJ0 315 aa2.61□□□□□ -1.99
SMC5-203ENST00000475540 BORCS8Q96FH0 119 aa2.61□□□□□ -1.99
SMC5-203ENST00000475540 MYH11P35749 1972 aa2.61□□□□□ -1.99
SMC5-203ENST00000475540 MYO16Q9Y6X6 1858 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 PLXNB1O43157 2135 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 PTPRSQ13332 1948 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 IGLV10-54A0A075B6I4 117 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 BORCS7-ASMTA0A0B4J1R7 106 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 A0A1B0GX51 115 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 M0QZK8 103 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 DEGS1O15121 323 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 HTR1AP08908 422 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 METTL15P1P0C7V9 234 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 RPL7P18124 248 aaKnown RBP2.6□□□□□ -1.99
SMC5-203ENST00000475540 FUSP35637 526 aaKnown RBP eCLIP2.6□□□□□ -1.99
SMC5-203ENST00000475540 HINT1P49773 126 aaPredicted RBP2.6□□□□□ -1.99
SMC5-203ENST00000475540 DYNLT3P51808 116 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 BRMS1LQ5PSV4 323 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 DEFB128Q7Z7B8 93 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 OR4D11Q8NGI4 311 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 SLC25A21Q9BQT8 299 aaPredicted RBP2.6□□□□□ -1.99
SMC5-203ENST00000475540 MRPL32Q9BYC8 188 aaKnown RBP2.6□□□□□ -1.99
SMC5-203ENST00000475540 YIPF3Q9GZM5 350 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 FAM107BQ9H098 131 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 TMEM138Q9NPI0 162 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 NDUFB11Q9NX14 153 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 RASL12Q9NYN1 266 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 MED31Q9Y3C7 131 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 CPDO75976 1380 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 DENND4CQ5VZ89 1909 aa2.6□□□□□ -1.99
SMC5-203ENST00000475540 BCL9O00512 1426 aa2.59□□□□□ -1.99
SMC5-203ENST00000475540 TRPM6Q9BX84 2022 aa2.59□□□□□ -1.99
SMC5-203ENST00000475540 DEFA4P12838 97 aa2.59□□□□□ -1.99
SMC5-203ENST00000475540 S100A11P31949 105 aa2.59□□□□□ -1.99
SMC5-203ENST00000475540 TMEM258P61165 79 aa2.59□□□□□ -1.99
SMC5-203ENST00000475540 RHOGP84095 191 aa2.59□□□□□ -1.99
SMC5-203ENST00000475540 MYL5Q02045 173 aa2.59□□□□□ -1.99
SMC5-203ENST00000475540 OR4E2Q8NGC2 313 aa2.59□□□□□ -1.99
SMC5-203ENST00000475540 TCEAL4Q96EI5 215 aa2.59□□□□□ -1.99
SMC5-203ENST00000475540 Q9BRP9 147 aa2.59□□□□□ -1.99
SMC5-203ENST00000475540 NHP2Q9NX24 153 aaKnown RBP2.59□□□□□ -1.99
SMC5-203ENST00000475540 KDM5BQ9UGL1 1544 aa2.58□□□□□ -2
SMC5-203ENST00000475540 TRAV36DV7A0A075B6V5 113 aa2.58□□□□□ -2
SMC5-203ENST00000475540 A0A087WX48 190 aa2.58□□□□□ -2
SMC5-203ENST00000475540 TRAV5A0A0B4J249 113 aa2.58□□□□□ -2
SMC5-203ENST00000475540 MUC21A0A0G2JKD1 596 aa2.58□□□□□ -2
SMC5-203ENST00000475540 MUC21A0A140T8X8 626 aa2.58□□□□□ -2
SMC5-203ENST00000475540 OR51F1A6NGY5 319 aa2.58□□□□□ -2
SMC5-203ENST00000475540 PCNX2A6NKB5 2137 aa2.58□□□□□ -2
SMC5-203ENST00000475540 NDUFB3O43676 98 aa2.58□□□□□ -2
SMC5-203ENST00000475540 CST7O76096 145 aa2.58□□□□□ -2
SMC5-203ENST00000475540 DBIP07108 87 aaKnown RBP2.58□□□□□ -2
SMC5-203ENST00000475540 RPS3P23396 243 aaKnown RBP eCLIP2.58□□□□□ -2
SMC5-203ENST00000475540 ERHP84090 104 aaKnown RBP2.58□□□□□ -2
SMC5-203ENST00000475540 EIF3IQ13347 325 aaKnown RBP2.58□□□□□ -2
SMC5-203ENST00000475540 OR8B8Q15620 311 aa2.58□□□□□ -2
SMC5-203ENST00000475540 OR2T10Q8NGZ9 312 aa2.58□□□□□ -2
SMC5-203ENST00000475540 ADAT1Q9BUB4 502 aaKnown RBP2.58□□□□□ -2
SMC5-203ENST00000475540 OR2H1Q9GZK4 316 aa2.58□□□□□ -2
SMC5-203ENST00000475540 TMEM126AQ9H061 195 aa2.58□□□□□ -2
SMC5-203ENST00000475540 POPDC3Q9HBV1 291 aa2.58□□□□□ -2
SMC5-203ENST00000475540 SCAF11Q99590 1463 aaKnown RBP2.58□□□□□ -2
SMC5-203ENST00000475540 CACNA1DQ01668 2161 aa2.57□□□□□ -2
SMC5-203ENST00000475540 RFPL4AA6NLU0 287 aa2.57□□□□□ -2
SMC5-203ENST00000475540 HMSDA8MTL9 139 aa2.57□□□□□ -2
SMC5-203ENST00000475540 RFPL4AL1F8VTS6 287 aa2.57□□□□□ -2
SMC5-203ENST00000475540 GABARAPH6UMI1 98 aa2.57□□□□□ -2
SMC5-203ENST00000475540 H7BYZ3 331 aa2.57□□□□□ -2
SMC5-203ENST00000475540 CLPSP04118 112 aa2.57□□□□□ -2
SMC5-203ENST00000475540 TRGC1P0CF51 173 aa2.57□□□□□ -2
SMC5-203ENST00000475540 SRP9P49458 86 aaKnown RBP2.57□□□□□ -2
SMC5-203ENST00000475540 PSG9Q00887 426 aa2.57□□□□□ -2
SMC5-203ENST00000475540 DEFB115Q30KQ5 88 aa2.57□□□□□ -2
SMC5-203ENST00000475540 AAED1Q7RTV5 226 aa2.57□□□□□ -2
SMC5-203ENST00000475540 WFDC11Q8NEX6 87 aa2.57□□□□□ -2
SMC5-203ENST00000475540 CARD19Q96LW7 228 aa2.57□□□□□ -2
SMC5-203ENST00000475540 PRADC1Q9BSG0 188 aa2.57□□□□□ -2
SMC5-203ENST00000475540 TCEAL2Q9H3H9 227 aaPredicted RBP2.57□□□□□ -2
SMC5-203ENST00000475540 OTORQ9NRC9 128 aa2.57□□□□□ -2
SMC5-203ENST00000475540 TRAPPC2LQ9UL33 140 aa2.57□□□□□ -2
SMC5-203ENST00000475540 BAIAP2Q9UQB8 552 aa2.57□□□□□ -2
SMC5-203ENST00000475540 CCL26Q9Y258 94 aa2.57□□□□□ -2
SMC5-203ENST00000475540 SLIT2O94813 1529 aa2.57□□□□□ -2
SMC5-203ENST00000475540 GREB1Q4ZG55 1949 aa2.56□□□□□ -2
SMC5-203ENST00000475540 SCN9AQ15858 1988 aa2.56□□□□□ -2
SMC5-203ENST00000475540 A0A1B0GVG6 124 aa2.56□□□□□ -2
SMC5-203ENST00000475540 E7EQL1 145 aa2.56□□□□□ -2
SMC5-203ENST00000475540 SDCBPO00560 298 aaPredicted RBP2.56□□□□□ -2
SMC5-203ENST00000475540 OVOL1O14753 267 aa2.56□□□□□ -2
SMC5-203ENST00000475540 HLA-EP13747 358 aa2.56□□□□□ -2
SMC5-203ENST00000475540 GPX2P18283 190 aa2.56□□□□□ -2
SMC5-203ENST00000475540 FKBP2P26885 142 aaKnown RBP2.56□□□□□ -2
SMC5-203ENST00000475540 EIF5AL1Q6IS14 154 aaKnown RBP2.56□□□□□ -2
SMC5-203ENST00000475540 LCN15Q6UWW0 184 aa2.56□□□□□ -2
SMC5-203ENST00000475540 HRCT1Q6UXD1 115 aa2.56□□□□□ -2
SMC5-203ENST00000475540 PDZD9Q8IXQ8 264 aa2.56□□□□□ -2
SMC5-203ENST00000475540 TMEM229BQ8NBD8 167 aa2.56□□□□□ -2
SMC5-203ENST00000475540 OR4X2Q8NGF9 303 aa2.56□□□□□ -2
SMC5-203ENST00000475540 C20orf166-AS1Q96NR2 134 aa2.56□□□□□ -2
SMC5-203ENST00000475540 NPCDR1Q9BY65 106 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms