RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 PRIMA1Q86XR5 153 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 ABHD12Q8N2K0 398 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 ANKRD29Q8N6D5 301 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 PIFOQ8TCI5 191 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 TP73-AS1Q9UF72 201 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 TCF19Q9Y242 345 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 GREB1LQ9C091 1923 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 PRRC2BQ5JSZ5 2229 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 FAM236AA0A1B0GUQ0 79 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 FAM236BA0A1B0GV22 79 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 A8MWL6 223 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 OOSP1A8MZH6 123 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 C11orf94C9JXX5 98 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 HMGN4O00479 90 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 HSPB6O14558 160 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 NDUFS7O75251 213 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 TRACP01848 142 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 LGALS1P09382 135 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 HLA-DRB4P13762 266 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 IGFBP3P17936 291 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 CD164Q04900 197 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 GUSBP1Q15486 140 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 IZUMO4Q1ZYL8 232 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 TMEM14EPQ6UXP3 125 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 FAM231DQ6ZW35 169 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 MYOZ3Q8TDC0 251 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 IL1F10Q8WWZ1 152 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 FGF14Q92915 247 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 ZNF689Q96CS4 500 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 Q96M85 177 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 ZNF331Q9NQX6 463 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 TMEM14AQ9Y6G1 99 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 HLA-DRB4X5D2U9 266 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 PLXNA3P51805 1871 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 TCF20Q9UGU0 1960 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 TTC3P53804 2025 aa4.8□□□□□ -1.64
ECHDC1-215ENST00000475319 SCN10AQ9Y5Y9 1956 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 FAM236DA0A1B0GTK5 79 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 J3QQQ9 107 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 CCL22O00626 93 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 PLPP1O14494 284 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 NUDT14O95848 222 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 P04436 131 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 FAM236CP0DP71 79 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 HLA-DOBP13765 273 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 PFN2P35080 140 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 HERV-K104P61576 105 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 HBG1P69891 147 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 HBG2P69892 147 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 DEFB103AP81534 67 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 LY6G5CQ5SRR4 150 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 CEND1Q8N111 149 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 RITA1Q96K30 269 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 C4orf45Q96LM5 186 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 CARD19Q96LW7 228 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 NMNAT3Q96T66 252 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 TMEM59Q9BXS4 323 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 MYLKQ15746 1914 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 DENND4CQ5VZ89 1909 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 BRCA2P51587 3418 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 A0A0C4DFX4 3053 aa4.79□□□□□ -1.64
ECHDC1-215ENST00000475319 BDP1A6H8Y1 2624 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 A0A0J9YW62 118 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 IZUMO1RA6ND01 250 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 C2CD4DB7Z1M9 353 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 FAM72CH0Y354 149 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 EPPINO95925 133 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 SCGB1C2P0DMR2 95 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 COX7CP15954 63 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 PSMB8P28062 276 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 SSR4P51571 173 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 ZNF136P52737 540 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 RPL30P62888 115 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 PRDX1Q06830 199 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 ARL16Q0P5N6 197 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 EBI3Q14213 229 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 RTL8BQ17RB0 113 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 LINC01620Q4KN68 170 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 ABCA11PQ4W5N1 156 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 FAM72AQ5TYM5 149 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 FAM72DQ6L9T8 149 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 C6orf201Q7Z4U5 140 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 HMGN2P46Q86SG4 172 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 FAM72BQ86X60 149 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 C1orf158Q8N1D5 194 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 CIARTQ8N365 385 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 GATAD1Q8WUU5 269 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 WFDC6Q9BQY6 131 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 OSTCQ9NRP0 149 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 PYGO1Q9Y3Y4 419 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 PIEZO1Q92508 2521 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 KIAA1671Q9BY89 1806 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 SZT2Q5T011 3432 aa4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 TRIP12Q14669 1992 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-215ENST00000475319 TRAV8-2A0A0B4J237 113 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 FAM240AA0A1B0GVK7 77 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 EPOPA6NHQ4 379 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 LY6LH3BQJ8 138 aa4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 PGLYRP1O75594 196 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-215ENST00000475319 HLA-DMBP28068 263 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms