RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 RAI1Q7Z5J4 1906 aaPredicted RBP11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 MBNL2Q5VZF2 373 aaKnown RBP11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 IGHV1-24A0A0C4DH33 117 aa11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 LEPROTL1O95214 131 aa11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 CR1LQ2VPA4 569 aa11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 PNKDQ8N490 385 aa11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 TMEM177Q53S58 311 aa11.06□□□□□ -0.64
SEMA4D-217ENST00000475255 BHLHA15Q7RTS1 189 aaPredicted RBP11.06□□□□□ -0.64
SEMA4D-217ENST00000475255 ZNF835Q9Y2P0 537 aa11.06□□□□□ -0.64
SEMA4D-217ENST00000475255 IGHV2-70DA0A0C4DH43 119 aa11.06□□□□□ -0.64
SEMA4D-217ENST00000475255 HSBP1L1C9JCN9 74 aa11.06□□□□□ -0.64
SEMA4D-217ENST00000475255 CCL8P80075 99 aa11.06□□□□□ -0.64
SEMA4D-217ENST00000475255 C22orf34Q6ZV56 151 aa11.06□□□□□ -0.64
SEMA4D-217ENST00000475255 RITA1Q96K30 269 aa11.06□□□□□ -0.64
SEMA4D-217ENST00000475255 ZNF257Q9Y2Q1 563 aa11.06□□□□□ -0.64
SEMA4D-217ENST00000475255 IGKV1D-37A0A075B6S9 117 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 IGLV1-44P01699 117 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 FAM87AP0C7U9 286 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 ZNF71Q9NQZ8 489 aaPredicted RBP11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 CACNA1BQ00975 2339 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 A6NJY4 79 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 SYS1-DBNDD2H3BUS1 97 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 KLK10O43240 276 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 FXYD7P58549 80 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 ERHP84090 104 aaKnown RBP11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 PDPNQ86YL7 162 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 TMEM116Q8NCL8 245 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 FLYWCH2Q96CP2 140 aaKnown RBP11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 GAFA1Q96PS6 74 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 CGB1A6NKQ9 187 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 DLL1O00548 723 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 TAX1BP3O14907 124 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 HIST1H1EP10412 219 aaKnown RBP11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 RIPPLY3P57055 190 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 CIARTQ8N365 385 aaPredicted RBP11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 TEX45Q8NA69 505 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 WIPF2Q8TF74 440 aaPredicted RBP11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 C7orf69Q9H7B7 122 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 EPDR1Q9UM22 224 aa11.05□□□□□ -0.64
SEMA4D-217ENST00000475255 CDKN1BP46527 198 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 HBBP68871 147 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 KLF5Q13887 457 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 GUSBP1Q15486 140 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 SLC25A34Q6PIV7 304 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 OR1L8Q8NGR8 309 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 CST9LQ9H4G1 147 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 PROCRQ9UNN8 238 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 WNK2Q9Y3S1 2297 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 A0A1W2PRD5 423 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 A0A1W2PRF3 423 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 A0A1W2PRM7 423 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 CHEK1O14757 476 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 SLC25A17O43808 307 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 LHBP01229 141 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 TNFAIP6P98066 277 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 ADTRPQ96IZ2 230 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 ZNF430Q9H8G1 570 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 NDUFA4L2Q9NRX3 87 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 SLC25A15Q9Y619 301 aa11.04□□□□□ -0.64
SEMA4D-217ENST00000475255 PPIAL4DF5H284 164 aa11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 POU2AF1Q16633 256 aa11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 SLC25A48Q6ZT89 311 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 DAZAP1Q96EP5 407 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 MRPL32Q9BYC8 188 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 RPUSD1Q9UJJ7 312 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 MED13LQ71F56 2210 aa11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 A0A1B0GXF2 115 aa11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 C22orf46C9J442 243 aa11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 BVES-AS1Q5T3Y7 98 aa11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 RNF7Q9UBF6 113 aa11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 FNDC10F2Z333 226 aa11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 ENSAO43768 121 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 OR2J3O76001 311 aa11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 P01737 135 aa11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 FAM231DQ6ZW35 169 aa11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 H1FXQ92522 213 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 TMUB1Q9BVT8 246 aa11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 RPP21Q9H633 154 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 SH3BGRL2Q9UJC5 107 aa11.03□□□□□ -0.64
SEMA4D-217ENST00000475255 TTC28Q96AY4 2481 aa11.02□□□□□ -0.65
SEMA4D-217ENST00000475255 hADV38S2A0JD32 116 aa11.02□□□□□ -0.65
SEMA4D-217ENST00000475255 ITGB1BP1O14713 200 aa11.02□□□□□ -0.65
SEMA4D-217ENST00000475255 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-217ENST00000475255 DKK4Q9UBT3 224 aa11.02□□□□□ -0.65
SEMA4D-217ENST00000475255 TCRBV4S1A1TA0A5B7 111 aa11.02□□□□□ -0.65
SEMA4D-217ENST00000475255 FSTL3O95633 263 aa11.02□□□□□ -0.65
SEMA4D-217ENST00000475255 NBEAP1P0C6P0 100 aa11.02□□□□□ -0.65
SEMA4D-217ENST00000475255 MZT1Q08AG7 82 aa11.02□□□□□ -0.65
SEMA4D-217ENST00000475255 SEM1Q6ZVN7 128 aa11.02□□□□□ -0.65
SEMA4D-217ENST00000475255 UBALD2Q8IYN6 164 aa11.02□□□□□ -0.65
SEMA4D-217ENST00000475255 EXOC3-AS1Q8N2X6 119 aa11.02□□□□□ -0.65
SEMA4D-217ENST00000475255 ZNF714Q96N38 554 aa11.02□□□□□ -0.65
SEMA4D-217ENST00000475255 C19orf24Q9BVV8 132 aa11.02□□□□□ -0.65
SEMA4D-217ENST00000475255 LOC389332A0A1B0GUA5 103 aa11.01□□□□□ -0.65
SEMA4D-217ENST00000475255 PRR33A8MZF0 331 aa11.01□□□□□ -0.65
SEMA4D-217ENST00000475255 K7EP13 123 aa11.01□□□□□ -0.65
SEMA4D-217ENST00000475255 IGHV1-46P01743 117 aa11.01□□□□□ -0.65
SEMA4D-217ENST00000475255 CD59P13987 128 aa11.01□□□□□ -0.65
SEMA4D-217ENST00000475255 PSG9Q00887 426 aa11.01□□□□□ -0.65
SEMA4D-217ENST00000475255 OCIAD2Q56VL3 154 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms