RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 E9PLN8 166 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 OR5A1Q8NGJ0 315 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 SLC25A28Q96A46 364 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 MED13LQ71F56 2210 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 CRPP02741 224 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 OCC1Q8TAD7 63 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 FNDC4Q9H6D8 234 aaPredicted RBP9.08□□□□□ -0.96
VAPB-204ENST00000475243 LOC102723996A0A087X1L8 192 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 SRSF7Q16629 238 aaKnown RBP eCLIP9.08□□□□□ -0.96
VAPB-204ENST00000475243 C5orf24Q7Z6I8 188 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 FAM169BQ8N8A8 192 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 CHCHD5Q9BSY4 110 aa9.08□□□□□ -0.96
VAPB-204ENST00000475243 ADARB2-AS1A8MUL3 147 aa9.07□□□□□ -0.96
VAPB-204ENST00000475243 GNLYP22749 145 aa9.07□□□□□ -0.96
VAPB-204ENST00000475243 NRN1Q9NPD7 142 aa9.07□□□□□ -0.96
VAPB-204ENST00000475243 ATRXP46100 2492 aa9.07□□□□□ -0.96
VAPB-204ENST00000475243 LY6HO94772 140 aa9.07□□□□□ -0.96
VAPB-204ENST00000475243 CCL20P78556 96 aa9.07□□□□□ -0.96
VAPB-204ENST00000475243 C15orf32Q32M92 178 aa9.07□□□□□ -0.96
VAPB-204ENST00000475243 CD28P10747 220 aa9.07□□□□□ -0.96
VAPB-204ENST00000475243 SRSF1Q07955 248 aaKnown RBP eCLIP9.07□□□□□ -0.96
VAPB-204ENST00000475243 Q6AWC8 147 aa9.07□□□□□ -0.96
VAPB-204ENST00000475243 IGHV2-26A0A0B4J1V2 119 aa9.07□□□□□ -0.96
VAPB-204ENST00000475243 PVRIGQ6DKI7 326 aa9.07□□□□□ -0.96
VAPB-204ENST00000475243 PCNX2A6NKB5 2137 aa9.07□□□□□ -0.96
VAPB-204ENST00000475243 PAX2Q02962 417 aa9.07□□□□□ -0.96
VAPB-204ENST00000475243 RNF182Q8N6D2 247 aa9.07□□□□□ -0.96
VAPB-204ENST00000475243 NHP2Q9NX24 153 aaKnown RBP9.07□□□□□ -0.96
VAPB-204ENST00000475243 VSIRQ9H7M9 311 aa9.06□□□□□ -0.96
VAPB-204ENST00000475243 WDR90Q96KV7 1748 aa9.06□□□□□ -0.96
VAPB-204ENST00000475243 SLC50A1Q9BRV3 221 aa9.06□□□□□ -0.96
VAPB-204ENST00000475243 LINC00271P0C7V0 271 aa9.06□□□□□ -0.96
VAPB-204ENST00000475243 KLF17Q5JT82 389 aaPredicted RBP9.06□□□□□ -0.96
VAPB-204ENST00000475243 GGNQ86UU5 652 aa9.06□□□□□ -0.96
VAPB-204ENST00000475243 NIT1Q86X76 327 aa9.06□□□□□ -0.96
VAPB-204ENST00000475243 SPCS1Q9Y6A9 102 aa9.06□□□□□ -0.96
VAPB-204ENST00000475243 IGHV3-53P01767 116 aa9.06□□□□□ -0.96
VAPB-204ENST00000475243 ZNF362Q5T0B9 420 aaPredicted RBP9.06□□□□□ -0.96
VAPB-204ENST00000475243 TRAV8-2A0A0B4J237 113 aa9.06□□□□□ -0.96
VAPB-204ENST00000475243 C19orf67A6NJJ6 358 aa9.06□□□□□ -0.96
VAPB-204ENST00000475243 BTCP35070 178 aa9.06□□□□□ -0.96
VAPB-204ENST00000475243 ERVK11-1P61568 191 aa9.06□□□□□ -0.96
VAPB-204ENST00000475243 FOXL1Q12952 345 aa9.06□□□□□ -0.96
VAPB-204ENST00000475243 SCRT1Q9BWW7 348 aa9.06□□□□□ -0.96
VAPB-204ENST00000475243 WFDC1Q9HC57 220 aa9.06□□□□□ -0.96
VAPB-204ENST00000475243 CARHSP1Q9Y2V2 147 aaKnown RBP9.06□□□□□ -0.96
VAPB-204ENST00000475243 DUSP14O95147 198 aaKnown RBP9.05□□□□□ -0.96
VAPB-204ENST00000475243 PRCDQ00LT1 54 aa9.05□□□□□ -0.96
VAPB-204ENST00000475243 UBE2DNLQ8IWF7 75 aa9.05□□□□□ -0.96
VAPB-204ENST00000475243 RLFQ13129 1914 aa9.05□□□□□ -0.96
VAPB-204ENST00000475243 TRAV41A0A0B4J266 112 aa9.05□□□□□ -0.96
VAPB-204ENST00000475243 IGKV1-12A0A0C4DH73 117 aa9.05□□□□□ -0.96
VAPB-204ENST00000475243 IGKV1D-12P01611 117 aa9.05□□□□□ -0.96
VAPB-204ENST00000475243 H3BUT2 72 aa9.05□□□□□ -0.96
VAPB-204ENST00000475243 MBNL3Q9NUK0 354 aaKnown RBP9.05□□□□□ -0.96
VAPB-204ENST00000475243 CHTOPQ9Y3Y2 248 aaKnown RBP9.05□□□□□ -0.96
VAPB-204ENST00000475243 A0A0G2JNJ9 132 aa9.05□□□□□ -0.96
VAPB-204ENST00000475243 TMEM8BA6NDV4 472 aa9.05□□□□□ -0.96
VAPB-204ENST00000475243 ZNF688P0C7X2 276 aa9.05□□□□□ -0.96
VAPB-204ENST00000475243 Q9UFV3 132 aa9.05□□□□□ -0.96
VAPB-204ENST00000475243 NAPSAO96009 420 aa9.05□□□□□ -0.96
VAPB-204ENST00000475243 LINC00205P59089 165 aa9.05□□□□□ -0.96
VAPB-204ENST00000475243 ZNF329Q86UD4 541 aa9.05□□□□□ -0.96
VAPB-204ENST00000475243 NXT2Q9NPJ8 142 aaKnown RBP9.05□□□□□ -0.96
VAPB-204ENST00000475243 CSRP1P21291 193 aaKnown RBP9.05□□□□□ -0.96
VAPB-204ENST00000475243 A0A1B0GW15 77 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 LILRA1O75019 489 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 DPM2O94777 84 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 LINC00158P58513 81 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 CYSLTR1Q9Y271 337 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 EFNA2O43921 213 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 ARHGAP21Q5T5U3 1957 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 EML6Q6ZMW3 1958 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 A0A087WWC5 75 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 H0YIZ8 118 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 TDGF1P3P51864 188 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 GSN-AS1Q9NRJ2 163 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 ACTL10Q5JWF8 245 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 ZNF474Q6S9Z5 364 aaPredicted RBP9.04□□□□□ -0.96
VAPB-204ENST00000475243 SPAG8Q99932 426 aaPredicted RBP9.04□□□□□ -0.96
VAPB-204ENST00000475243 H3BUX3 64 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 PSG1P11464 419 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 UBE2E2Q96LR5 201 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 NTN3O00634 580 aaPredicted RBP9.04□□□□□ -0.96
VAPB-204ENST00000475243 PSPNO60542 156 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 IGKV1-27A0A075B6S5 117 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 TRAV3A0A0B4J244 114 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 F8VVB4 439 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 F8VWA3 439 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 TMEM178BH3BS89 294 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 LYPD3O95274 346 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 NCR2O95944 276 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 CD300EQ496F6 205 aaPredicted RBP9.04□□□□□ -0.96
VAPB-204ENST00000475243 GFI1Q99684 422 aa9.04□□□□□ -0.96
VAPB-204ENST00000475243 TMEM249Q2WGJ8 235 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 LY6G6FQ5SQ64 297 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 SPATA31B1PQ5VZV4 182 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 A8MXK9 166 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 CCL1P22362 96 aa9.03□□□□□ -0.96
VAPB-204ENST00000475243 CKS1BP61024 79 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms