RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 ZFP92A6NM28 416 aa6.94□□□□□ -1.3
PDPN-204ENST00000475043 JTBO76095 146 aa6.94□□□□□ -1.3
PDPN-204ENST00000475043 SFT2D2O95562 160 aa6.94□□□□□ -1.3
PDPN-204ENST00000475043 HNRNPCP07910 306 aaKnown RBP eCLIP6.94□□□□□ -1.3
PDPN-204ENST00000475043 HOXB5P09067 269 aa6.94□□□□□ -1.3
PDPN-204ENST00000475043 RD3LP0DJH9 198 aa6.94□□□□□ -1.3
PDPN-204ENST00000475043 IAPPP10997 89 aa6.94□□□□□ -1.3
PDPN-204ENST00000475043 EIF2B2P49770 351 aaKnown RBP6.94□□□□□ -1.3
PDPN-204ENST00000475043 PPP1R1AQ13522 171 aa6.94□□□□□ -1.3
PDPN-204ENST00000475043 PMS2P11Q13670 270 aa6.94□□□□□ -1.3
PDPN-204ENST00000475043 STHQ8IWL8 128 aa6.94□□□□□ -1.3
PDPN-204ENST00000475043 FAM24BQ8N5W8 94 aa6.94□□□□□ -1.3
PDPN-204ENST00000475043 SRRQ9GZT4 340 aa6.94□□□□□ -1.3
PDPN-204ENST00000475043 HELTA6NFD8 242 aa6.93□□□□□ -1.3
PDPN-204ENST00000475043 K7EQG2 157 aa6.93□□□□□ -1.3
PDPN-204ENST00000475043 PITX3O75364 302 aa6.93□□□□□ -1.3
PDPN-204ENST00000475043 MED6O75586 246 aa6.93□□□□□ -1.3
PDPN-204ENST00000475043 TOMM40O96008 361 aa6.93□□□□□ -1.3
PDPN-204ENST00000475043 CA1P00915 261 aaPredicted RBP6.93□□□□□ -1.3
PDPN-204ENST00000475043 ZNF688P0C7X2 276 aa6.93□□□□□ -1.3
PDPN-204ENST00000475043 PSG1P11464 419 aa6.93□□□□□ -1.3
PDPN-204ENST00000475043 AP2S1P53680 142 aaPredicted RBP6.93□□□□□ -1.3
PDPN-204ENST00000475043 ATP5IP56385 69 aaPredicted RBP6.93□□□□□ -1.3
PDPN-204ENST00000475043 RAB11AP62491 216 aa6.93□□□□□ -1.3
PDPN-204ENST00000475043 DHRS2Q13268 280 aa6.93□□□□□ -1.3
PDPN-204ENST00000475043 USF2Q15853 346 aaPredicted RBP6.93□□□□□ -1.3
PDPN-204ENST00000475043 BAK1Q16611 211 aa6.93□□□□□ -1.3
PDPN-204ENST00000475043 LRTM2Q8N967 370 aa6.93□□□□□ -1.3
PDPN-204ENST00000475043 SLC35E1Q96K37 410 aa6.93□□□□□ -1.3
PDPN-204ENST00000475043 RARRES2Q99969 163 aa6.93□□□□□ -1.3
PDPN-204ENST00000475043 PBDC1Q9BVG4 233 aa6.93□□□□□ -1.3
PDPN-204ENST00000475043 MAGT1Q9H0U3 335 aa6.93□□□□□ -1.3
PDPN-204ENST00000475043 TMED3Q9Y3Q3 217 aa6.93□□□□□ -1.3
PDPN-204ENST00000475043 RYR3Q15413 4870 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 NAP1L6A6NFF2 107 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 CENPXA8MT69 81 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 FAM90A26D6RGX4 464 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 WRBO00258 174 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 SLC25A6P12236 298 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 GPX4P36969 197 aaPredicted RBP6.92□□□□□ -1.3
PDPN-204ENST00000475043 EWSR1Q01844 656 aaKnown RBP eCLIP6.92□□□□□ -1.3
PDPN-204ENST00000475043 ZNF90Q03938 601 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 GAMTQ14353 236 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 GGNBP1Q5YKI7 109 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 C16orf54Q6UWD8 224 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 TMEM217Q8N7C4 229 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 OR51G1Q8NGK1 321 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 DCANP1Q8TF63 244 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 GATAD1Q8WUU5 269 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 GLMPQ8WWB7 406 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 RNF125Q96EQ8 232 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 CIB3Q96Q77 187 aaPredicted RBP6.92□□□□□ -1.3
PDPN-204ENST00000475043 U3KQE9 123 aa6.92□□□□□ -1.3
PDPN-204ENST00000475043 C9orf170A2RU37 121 aa6.91□□□□□ -1.3
PDPN-204ENST00000475043 NUPR2A6NF83 97 aa6.91□□□□□ -1.3
PDPN-204ENST00000475043 KNCNA6PVL3 124 aa6.91□□□□□ -1.3
PDPN-204ENST00000475043 SYNGR2O43760 224 aa6.91□□□□□ -1.3
PDPN-204ENST00000475043 ADAP1O75689 374 aa6.91□□□□□ -1.3
PDPN-204ENST00000475043 NDUFB6O95139 128 aa6.91□□□□□ -1.3
PDPN-204ENST00000475043 FABP1P07148 127 aa6.91□□□□□ -1.3
PDPN-204ENST00000475043 UBE2MP61081 183 aaKnown RBP6.91□□□□□ -1.3
PDPN-204ENST00000475043 RPP30P78346 268 aaKnown RBP6.91□□□□□ -1.3
PDPN-204ENST00000475043 PSMG4Q5JS54 123 aa6.91□□□□□ -1.3
PDPN-204ENST00000475043 ACTL10Q5JWF8 245 aa6.91□□□□□ -1.3
PDPN-204ENST00000475043 SPANXN5Q5MJ07 72 aa6.91□□□□□ -1.3
PDPN-204ENST00000475043 SIGLEC15Q6ZMC9 328 aa6.91□□□□□ -1.3
PDPN-204ENST00000475043 OR11H2Q8NH07 326 aa6.91□□□□□ -1.3
PDPN-204ENST00000475043 PFDN2Q9UHV9 154 aa6.91□□□□□ -1.3
PDPN-204ENST00000475043 FLVCR2Q9UPI3 526 aa6.91□□□□□ -1.3
PDPN-204ENST00000475043 TENM2Q9NT68 2774 aa6.91□□□□□ -1.3
PDPN-204ENST00000475043 CSMD3Q7Z407 3707 aa6.9□□□□□ -1.3
PDPN-204ENST00000475043 KRTAP4-8A0A0G2JLE6 195 aa6.9□□□□□ -1.3
PDPN-204ENST00000475043 TMEM238LA0A1B0GVL6 79 aa6.9□□□□□ -1.3
PDPN-204ENST00000475043 SNRPGP15A8MWD9 76 aa6.9□□□□□ -1.3
PDPN-204ENST00000475043 H3BP45 60 aa6.9□□□□□ -1.3
PDPN-204ENST00000475043 BUB3O43684 328 aa6.9□□□□□ -1.3
PDPN-204ENST00000475043 IFNA21P01568 189 aa6.9□□□□□ -1.3
PDPN-204ENST00000475043 NUP62P37198 522 aaPredicted RBP6.9□□□□□ -1.3
PDPN-204ENST00000475043 LYZP61626 148 aa6.9□□□□□ -1.3
PDPN-204ENST00000475043 SNRPD3P62318 126 aaKnown RBP6.9□□□□□ -1.3
PDPN-204ENST00000475043 OR2F1Q13607 317 aa6.9□□□□□ -1.3
PDPN-204ENST00000475043 C4orf46Q504U0 113 aa6.9□□□□□ -1.3
PDPN-204ENST00000475043 COQ8AQ8NI60 647 aa6.9□□□□□ -1.3
PDPN-204ENST00000475043 PPP1R14BQ96C90 147 aa6.9□□□□□ -1.3
PDPN-204ENST00000475043 SDHCQ99643 169 aaPredicted RBP6.9□□□□□ -1.3
PDPN-204ENST00000475043 NRN1Q9NPD7 142 aa6.9□□□□□ -1.3
PDPN-204ENST00000475043 IGKV1D-37A0A075B6S9 117 aa6.89□□□□□ -1.31
PDPN-204ENST00000475043 DEFB4AO15263 64 aa6.89□□□□□ -1.31
PDPN-204ENST00000475043 OR4E1P0C645 316 aa6.89□□□□□ -1.31
PDPN-204ENST00000475043 SPP1P10451 314 aa6.89□□□□□ -1.31
PDPN-204ENST00000475043 IL7P13232 177 aa6.89□□□□□ -1.31
PDPN-204ENST00000475043 ANXA7P20073 488 aaKnown RBP6.89□□□□□ -1.31
PDPN-204ENST00000475043 OR8G2PQ6IF36 304 aa6.89□□□□□ -1.31
PDPN-204ENST00000475043 TRPT1Q86TN4 253 aaKnown RBP6.89□□□□□ -1.31
PDPN-204ENST00000475043 RAB40CQ96S21 281 aa6.89□□□□□ -1.31
PDPN-204ENST00000475043 C7orf50Q9BRJ6 194 aaKnown RBP6.89□□□□□ -1.31
PDPN-204ENST00000475043 NDUFA13Q9P0J0 144 aa6.89□□□□□ -1.31
PDPN-204ENST00000475043 STRAPQ9Y3F4 350 aaKnown RBP6.89□□□□□ -1.31
PDPN-204ENST00000475043 DNAH7Q8WXX0 4024 aa6.89□□□□□ -1.31
PDPN-204ENST00000475043 IGKV1OR2-108A0A075B7D4 117 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms