RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 PFDN2Q9UHV9 154 aa5.15□□□□□ -1.59
ATG4A-207ENST00000474825 FBXL7Q9UJT9 491 aa5.15□□□□□ -1.59
ATG4A-207ENST00000474825 CDC42EP3Q9UKI2 254 aa5.15□□□□□ -1.59
ATG4A-207ENST00000474825 HIVEP2P31629 2446 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 TRBV7-1A0A0A6YYK4 115 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 WI2-2373I1.2A0A1W2PRP0 233 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 ZFP92A6NM28 416 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 OR2J3O76001 311 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 TOMM40O96008 361 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 IGHV3-48P01763 117 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 CTSGP08311 255 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 STAG3L2P0CL84 134 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 STAG3L3P0CL85 134 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 S100A1P23297 94 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 PSMB8P28062 276 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 SRP14P37108 136 aaKnown RBP5.14□□□□□ -1.59
ATG4A-207ENST00000474825 ELLP55199 621 aaPredicted RBP5.14□□□□□ -1.59
ATG4A-207ENST00000474825 CCL20P78556 96 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 RHOGP84095 191 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 ZNF90Q03938 601 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 KIAA0141Q14154 515 aaPredicted RBP5.14□□□□□ -1.59
ATG4A-207ENST00000474825 ECSCRQ19T08 205 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 GCSAMLQ5JQS6 135 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 PATE2Q6UY27 113 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 BPIFCQ8NFQ6 507 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 MYOZ3Q8TDC0 251 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 WIPF2Q8TF74 440 aaPredicted RBP5.14□□□□□ -1.59
ATG4A-207ENST00000474825 TMEM37Q8WXS4 190 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 RAB24Q969Q5 203 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 USMG5Q96IX5 58 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 RNF2Q99496 336 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 NPFFR1Q9GZQ6 430 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 HRH4Q9H3N8 390 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 DNAJC4Q9NNZ3 241 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 ESM1Q9NQ30 184 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 GAR1Q9NY12 217 aaKnown RBP5.14□□□□□ -1.59
ATG4A-207ENST00000474825 MRPL27Q9P0M9 148 aaKnown RBP5.14□□□□□ -1.59
ATG4A-207ENST00000474825 CUBNO60494 3623 aa5.14□□□□□ -1.59
ATG4A-207ENST00000474825 MAP1LC3B2A6NCE7 125 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 INAFM1C9JVW0 142 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 TEX46H3BTG2 121 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 FABP1P07148 127 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 RNASE1P07998 156 aaKnown RBP5.13□□□□□ -1.59
ATG4A-207ENST00000474825 PSG1P11464 419 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 GATA2P23769 480 aaPredicted RBP5.13□□□□□ -1.59
ATG4A-207ENST00000474825 ADMP35318 185 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 TAGLN2P37802 199 aaKnown RBP5.13□□□□□ -1.59
ATG4A-207ENST00000474825 CDC34P49427 236 aaPredicted RBP5.13□□□□□ -1.59
ATG4A-207ENST00000474825 HILS1P60008 231 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 RHOBP62745 196 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 ZNF616Q08AN1 781 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 C15orf32Q32M92 178 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 FAM209BQ5JX69 171 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 C10orf91Q5T1B1 145 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 ZNF343Q6P1L6 599 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 IL17RELQ6ZVW7 336 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 ZNF491Q8N8L2 437 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 OR1L4Q8NGR5 311 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 SFT2D1Q8WV19 159 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 FAM167A-AS1Q96KT0 104 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 CCDC140Q96MF4 163 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 NOL4LQ96MY1 436 aaPredicted RBP5.13□□□□□ -1.59
ATG4A-207ENST00000474825 PFDN5Q99471 154 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 MRPL32Q9BYC8 188 aaKnown RBP5.13□□□□□ -1.59
ATG4A-207ENST00000474825 MAP1LC3BQ9GZQ8 125 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 C16orf95Q9H693 158 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 SEPSECSQ9HD40 501 aaKnown RBP5.13□□□□□ -1.59
ATG4A-207ENST00000474825 SERTAD4Q9NUC0 356 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 FUT9Q9Y231 359 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 ARL2-SNX15V9GYD0 113 aa5.13□□□□□ -1.59
ATG4A-207ENST00000474825 SONP18583 2426 aaKnown RBP5.12□□□□□ -1.59
ATG4A-207ENST00000474825 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.12□□□□□ -1.59
ATG4A-207ENST00000474825 IGHV3-21A0A0B4J1V1 117 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 A0A1W2PPV4 95 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 DNAJC9-AS1A6NH13 148 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 CRLF1O75462 422 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 ELANEP08246 267 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 RD3LP0DJH9 198 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 C8orf88P0DMB2 117 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 PSMB3P49720 205 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 PPT1P50897 306 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 RAB9AP51151 201 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 SRSF3P84103 164 aaKnown RBP5.12□□□□□ -1.59
ATG4A-207ENST00000474825 ATP5G2Q06055 141 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 FOXE3Q13461 319 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 GUK1Q16774 197 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 TIGITQ495A1 244 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 KHDC3LQ587J8 217 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 C9orf152Q5JTZ5 239 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 ZNF506Q5JVG8 444 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 SPATA31B1PQ5VZV4 182 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 FAM122CQ6P4D5 195 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 LCN15Q6UWW0 184 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 RBMS3Q6XE24 437 aaKnown RBP5.12□□□□□ -1.59
ATG4A-207ENST00000474825 MIR17HGQ75NE6 70 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 OR51G1Q8NGK1 321 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 EEF1AKMT3Q96AZ1 226 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 ZNF503Q96F45 646 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 KRTAP17-1Q9BYP8 105 aa5.12□□□□□ -1.59
ATG4A-207ENST00000474825 KLK15Q9H2R5 256 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms