RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 HAX1O00165 279 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 ZNF207O43670 478 aaKnown RBP6.55□□□□□ -1.36
CCDC93-208ENST00000474546 SSTR5P35346 364 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 SLAQ13239 276 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 BVES-AS1Q5T3Y7 98 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 C9orf135Q5VTT2 229 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 SLC25A48Q6ZT89 311 aaKnown RBP6.55□□□□□ -1.36
CCDC93-208ENST00000474546 LYG1Q8N1E2 194 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 ABHD12Q8N2K0 398 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 TMEM251Q8N6I4 163 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 RBMXL3Q8N7X1 1067 aaKnown RBP6.55□□□□□ -1.36
CCDC93-208ENST00000474546 THAP8Q8NA92 274 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 GATD1Q8NB37 220 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 RNASE8Q8TDE3 154 aaKnown RBP6.55□□□□□ -1.36
CCDC93-208ENST00000474546 CT55Q8WUE5 264 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 LRRC29Q8WV35 223 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 H1FXQ92522 213 aaKnown RBP6.55□□□□□ -1.36
CCDC93-208ENST00000474546 RCHY1Q96PM5 261 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 WNT10AQ9GZT5 417 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 CSTL1Q9H114 145 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 IDI2-AS1Q9NZ38 188 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 CRIM1Q9NZV1 1036 aa6.55□□□□□ -1.36
CCDC93-208ENST00000474546 LOC105371242A0A075B767 164 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 TEX50A0A1B0GTY4 177 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 H3BRM9 83 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 NUDT3O95989 172 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 CT45A6P0DMU7 189 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 CT45A5P0DMU8 189 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 CT45A7P0DMV0 189 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 COX8AP10176 69 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 GNLYP22749 145 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 ACP1P24666 158 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 GPR183P32249 361 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 GATA4P43694 442 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 UQCRFS1P47985 274 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 FOXA3P55318 350 aaPredicted RBP6.54□□□□□ -1.36
CCDC93-208ENST00000474546 LOXL3P58215 753 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 MEF2CQ06413 473 aaPredicted RBP6.54□□□□□ -1.36
CCDC93-208ENST00000474546 C21orf62-AS1Q17RA5 79 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 CT45A1Q5HYN5 189 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 LINC01545Q5VT33 79 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 IGF2-ASQ6U949 168 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 UNQ5815/PRO19632Q6UWF5 114 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 FAM214BQ7L5A3 538 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 ZNF329Q86UD4 541 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 C11orf53Q8IXP5 236 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 LYPD1Q8N2G4 141 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 MTURNQ8N3F0 131 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 OR2T6Q8NHC8 308 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 CT45A3Q8NHU0 189 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 SNRNP40Q96DI7 357 aaKnown RBP6.54□□□□□ -1.36
CCDC93-208ENST00000474546 NUDT11Q96G61 164 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 TMUB1Q9BVT8 246 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 KRTAP17-1Q9BYP8 105 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 PRSS22Q9GZN4 317 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 SCRT2Q9NQ03 307 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 CLCF1Q9UBD9 225 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 EPDR1Q9UM22 224 aa6.54□□□□□ -1.36
CCDC93-208ENST00000474546 TRAV34A0A0B4J273 112 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 hADV38S2A0JD32 116 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 GAGE12BA1L429 117 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 ZNF503-AS2A6NEH8 195 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 GAGE10A6NGK3 116 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 F2Z2F3 143 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 TAX1BP3O14907 124 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 ACTL6BO94805 426 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 CD33P20138 364 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 MC5RP33032 325 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 MAGEA5P43359 124 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 MEOX1P50221 254 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 TCL1AP56279 114 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 HSD52Q0P140 79 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 Q0VFX4 171 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 FXYD3Q14802 87 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 PLGLAQ15195 96 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 KIAA1644Q3SXP7 199 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 SPINK9Q5DT21 86 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 CDCP2Q5VXM1 449 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 EBLN2Q6P2I7 272 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 BOD1L2Q8IYS8 172 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 PIFOQ8TCI5 191 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 FAM222BQ8WU58 562 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 TRGV9Q99603 122 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 SLC25A2Q9BXI2 301 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 ZNF355PQ9NSJ1 428 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 AP5S1Q9NUS5 200 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 TMEM14CQ9P0S9 112 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 NBEAL2Q6ZNJ1 2754 aa6.53□□□□□ -1.36
CCDC93-208ENST00000474546 LOC102724200A0A096LPH7 203 aaPredicted RBP6.52□□□□□ -1.37
CCDC93-208ENST00000474546 C7orf71A4D174 169 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 CBY3A6NI87 242 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 NPIPB6E9PJ23 425 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 SCGB2A1O75556 95 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 FOXH1O75593 365 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 LTAP01374 205 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 IGLV1-44P01699 117 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 SAA2P0DJI9 122 aaPredicted RBP6.52□□□□□ -1.37
CCDC93-208ENST00000474546 CGB3P0DN86 165 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 CGB7P0DN87 165 aa6.52□□□□□ -1.37
CCDC93-208ENST00000474546 RNASE2P10153 161 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms