RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 CT45A6P0DMU7 189 aa16.63■□□□□ 0.25
SMIM11A-204ENST00000474455 CT45A5P0DMU8 189 aa16.63■□□□□ 0.25
SMIM11A-204ENST00000474455 CT45A7P0DMV0 189 aa16.63■□□□□ 0.25
SMIM11A-204ENST00000474455 CBLN1P23435 193 aa16.63■□□□□ 0.25
SMIM11A-204ENST00000474455 PRRX1P54821 245 aa16.63■□□□□ 0.25
SMIM11A-204ENST00000474455 TOMM20LQ6UXN7 152 aa16.63■□□□□ 0.25
SMIM11A-204ENST00000474455 ZNF833PQ6ZTB9 187 aa16.63■□□□□ 0.25
SMIM11A-204ENST00000474455 STPG3Q8N7X2 389 aa16.63■□□□□ 0.25
SMIM11A-204ENST00000474455 OR5AU1Q8NGC0 362 aa16.63■□□□□ 0.25
SMIM11A-204ENST00000474455 C7orf69Q9H7B7 122 aa16.63■□□□□ 0.25
SMIM11A-204ENST00000474455 TMEM167BQ9NRX6 74 aa16.63■□□□□ 0.25
SMIM11A-204ENST00000474455 ODF3BA8MYP8 253 aa16.62■□□□□ 0.25
SMIM11A-204ENST00000474455 K7EN84 100 aa16.62■□□□□ 0.25
SMIM11A-204ENST00000474455 RPLP1P05386 114 aaKnown RBP16.62■□□□□ 0.25
SMIM11A-204ENST00000474455 NPY1RP25929 384 aa16.62■□□□□ 0.25
SMIM11A-204ENST00000474455 DDB2Q92466 427 aa16.62■□□□□ 0.25
SMIM11A-204ENST00000474455 TMEM68Q96MH6 324 aa16.62■□□□□ 0.25
SMIM11A-204ENST00000474455 MRPL20Q9BYC9 149 aaKnown RBP16.62■□□□□ 0.25
SMIM11A-204ENST00000474455 ENY2Q9NPA8 101 aa16.62■□□□□ 0.25
SMIM11A-204ENST00000474455 ANK3Q12955 4377 aaKnown RBP16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 CENPVL3A0A0U1RRI6 287 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 GRIFINA4D1Z8 144 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 ATP5IP56385 69 aaPredicted RBP16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 LINC00310P59036 64 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 HSPE1P61604 102 aaKnown RBP16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 PRR20EP86478 221 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 PRR20CP86479 221 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 PRR20DP86480 221 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 PRR20BP86481 221 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 PRR20AP86496 221 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 BAGE3Q86Y29 109 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 BAGE2Q86Y30 109 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 SLC24A4Q8NFF2 622 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 SLC45A2Q9UMX9 530 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 FCN1O00602 326 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 SERF1AO75920 110 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 THBS3P49746 956 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 GAGE1Q13065 139 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 RTL8BQ17RB0 113 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 ARSJQ5FYB0 599 aaPredicted RBP16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 ZNF705AQ6ZN79 300 aaPredicted RBP16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 MMD2Q8IY49 270 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 ADTRPQ96IZ2 230 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 HSPB9Q9BQS6 159 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 ATG101Q9BSB4 218 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 V9GYV3 84 aa16.61■□□□□ 0.25
SMIM11A-204ENST00000474455 LY6LH3BQJ8 138 aa16.6■□□□□ 0.25
SMIM11A-204ENST00000474455 DYNAPQ8N1N2 210 aa16.6■□□□□ 0.25
SMIM11A-204ENST00000474455 SSMEM1Q8WWF3 244 aa16.6■□□□□ 0.25
SMIM11A-204ENST00000474455 SLC35E1Q96K37 410 aa16.6■□□□□ 0.25
SMIM11A-204ENST00000474455 C19orf24Q9BVV8 132 aa16.6■□□□□ 0.25
SMIM11A-204ENST00000474455 OSTCQ9NRP0 149 aa16.6■□□□□ 0.25
SMIM11A-204ENST00000474455 HILPDAQ9Y5L2 63 aa16.6■□□□□ 0.25
SMIM11A-204ENST00000474455 PLXNB1O43157 2135 aa16.6■□□□□ 0.25
SMIM11A-204ENST00000474455 HNF1AP20823 631 aa16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 ZNF137PP52743 207 aa16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 OR10J3Q5JRS4 329 aa16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 RUSC1-AS1Q66K80 236 aa16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 PIP4P2Q8N4L2 257 aa16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 VAMP8Q9BV40 100 aa16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 TMEM14BQ9NUH8 114 aa16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 SOX21Q9Y651 276 aaPredicted RBP16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 TNCP24821 2201 aa16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 SETXQ7Z333 2677 aaKnown RBP16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 IGHV3-72A0A0B4J1Y9 119 aa16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 IGHV4-38-2P0DP08 117 aa16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 GNG4P50150 75 aa16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 POU2AF1Q16633 256 aa16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 AJUBAQ96IF1 538 aa16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 SEPSECSQ9HD40 501 aaKnown RBP16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 PPP1R14DQ9NXH3 145 aa16.59■□□□□ 0.25
SMIM11A-204ENST00000474455 SONP18583 2426 aaKnown RBP16.58■□□□□ 0.24
SMIM11A-204ENST00000474455 TRAV3A0A0B4J244 114 aa16.58■□□□□ 0.24
SMIM11A-204ENST00000474455 TRAV40A0A0B4J280 105 aa16.58■□□□□ 0.24
SMIM11A-204ENST00000474455 HELTA6NFD8 242 aa16.58■□□□□ 0.24
SMIM11A-204ENST00000474455 SNURFLB1AK76 121 aa16.58■□□□□ 0.24
SMIM11A-204ENST00000474455 SLC17A3O00476 420 aa16.58■□□□□ 0.24
SMIM11A-204ENST00000474455 HTR1DP28221 377 aa16.58■□□□□ 0.24
SMIM11A-204ENST00000474455 IER3P46695 156 aa16.58■□□□□ 0.24
SMIM11A-204ENST00000474455 UBE2E1P51965 193 aa16.58■□□□□ 0.24
SMIM11A-204ENST00000474455 SPATA31B1PQ5VZV4 182 aa16.58■□□□□ 0.24
SMIM11A-204ENST00000474455 BRD3OSQ6XYD6 125 aa16.58■□□□□ 0.24
SMIM11A-204ENST00000474455 NABP2Q9BQ15 211 aa16.58■□□□□ 0.24
SMIM11A-204ENST00000474455 SAMD10Q9BYL1 202 aa16.58■□□□□ 0.24
SMIM11A-204ENST00000474455 ZNF586Q9NXT0 402 aa16.58■□□□□ 0.24
SMIM11A-204ENST00000474455 TET2Q6N021 2002 aaPredicted RBP16.58■□□□□ 0.24
SMIM11A-204ENST00000474455 BRS3P32247 399 aa16.57■□□□□ 0.24
SMIM11A-204ENST00000474455 CX3CL1P78423 397 aa16.57■□□□□ 0.24
SMIM11A-204ENST00000474455 KLF17Q5JT82 389 aaPredicted RBP16.57■□□□□ 0.24
SMIM11A-204ENST00000474455 SIGLECL1Q8N7X8 197 aa16.57■□□□□ 0.24
SMIM11A-204ENST00000474455 OR4B1Q8NGF8 309 aa16.57■□□□□ 0.24
SMIM11A-204ENST00000474455 TECRQ9NZ01 308 aaKnown RBP16.57■□□□□ 0.24
SMIM11A-204ENST00000474455 IGKV1-16P04430 117 aa16.56■□□□□ 0.24
SMIM11A-204ENST00000474455 REG1AP05451 166 aa16.56■□□□□ 0.24
SMIM11A-204ENST00000474455 OR5G3P0C626 314 aa16.56■□□□□ 0.24
SMIM11A-204ENST00000474455 LINC00869P0C866 280 aa16.56■□□□□ 0.24
SMIM11A-204ENST00000474455 ZNF25P17030 456 aaPredicted RBP16.56■□□□□ 0.24
SMIM11A-204ENST00000474455 VKORC1L1Q8N0U8 176 aa16.56■□□□□ 0.24
SMIM11A-204ENST00000474455 DPM3Q9P2X0 92 aa16.56■□□□□ 0.24
SMIM11A-204ENST00000474455 CA2P00918 260 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms