RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 PVRIGQ6DKI7 326 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 Q6ZTC4 211 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 SLC16A13Q7RTY0 426 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 APRG1Q8IVJ8 170 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 SELENOHQ8IZQ5 122 aaKnown RBP5.11□□□□□ -1.59
VPS50-211ENST00000474412 CCDC71LQ8N9Z2 235 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 RNASE11Q8TAA1 199 aaKnown RBP5.11□□□□□ -1.59
VPS50-211ENST00000474412 GPR146Q96CH1 333 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 GGTLC1Q9BX51 225 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 NXF2Q9GZY0 626 aaKnown RBP5.11□□□□□ -1.59
VPS50-211ENST00000474412 CACNG5Q9UF02 275 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 GPR132Q9UNW8 380 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 C14orf166Q9Y224 244 aaKnown RBP5.11□□□□□ -1.59
VPS50-211ENST00000474412 IGLV5-37A0A075B6J1 123 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 LCE6AA0A183 80 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 A0A1B0GUV1 79 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 DISC1C4P0D8 188 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 CHEK1O14757 476 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 TSPAN4O14817 238 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 CYB5BO43169 146 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 YIF1AO95070 293 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 CDS2O95674 445 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 IFNA17P01571 189 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 RPL35AP18077 110 aaKnown RBP5.1□□□□□ -1.59
VPS50-211ENST00000474412 OPRK1P41145 380 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 RPL5P46777 297 aaKnown RBP5.1□□□□□ -1.59
VPS50-211ENST00000474412 MFAP4P55083 255 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 MRPS10P82664 201 aaKnown RBP5.1□□□□□ -1.59
VPS50-211ENST00000474412 SSBP1Q04837 148 aaKnown RBP5.1□□□□□ -1.59
VPS50-211ENST00000474412 TMEM187Q14656 261 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 BSXQ3C1V8 233 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 TIGITQ495A1 244 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 TOMM20LQ6UXN7 152 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 GSG1LQ6UXU4 331 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 RBPMS2Q6ZRY4 209 aaKnown RBP5.1□□□□□ -1.59
VPS50-211ENST00000474412 FAM219AQ8IW50 185 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 GBGT1Q8N5D6 347 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 MCFD2Q8NI22 146 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 ZFAND1Q8TCF1 268 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 RBPMSQ93062 196 aaKnown RBP5.1□□□□□ -1.59
VPS50-211ENST00000474412 MARC2Q969Z3 335 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 OR10C1Q96KK4 312 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 SPAG8Q99932 426 aaPredicted RBP5.1□□□□□ -1.59
VPS50-211ENST00000474412 SOSTQ9BQB4 213 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 OVOL2Q9BRP0 275 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 RHPN1-AS1Q9BWJ2 59 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 FKBP11Q9NYL4 201 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 SMPXQ9UHP9 88 aa5.1□□□□□ -1.59
VPS50-211ENST00000474412 PUS1Q9Y606 427 aaKnown RBP eCLIP5.1□□□□□ -1.59
VPS50-211ENST00000474412 LOC102724200A0A096LPH7 203 aaPredicted RBP5.09□□□□□ -1.59
VPS50-211ENST00000474412 TRAV25A0A0B4J276 109 aa5.09□□□□□ -1.59
VPS50-211ENST00000474412 TEX13DA0A0J9YY54 714 aaPredicted RBP5.09□□□□□ -1.59
VPS50-211ENST00000474412 CBY3A6NI87 242 aa5.09□□□□□ -1.59
VPS50-211ENST00000474412 C15orf62A8K5M9 175 aa5.09□□□□□ -1.59
VPS50-211ENST00000474412 INS-IGF2F8WCM5 200 aa5.09□□□□□ -1.59
VPS50-211ENST00000474412 GSTZ1O43708 216 aaPredicted RBP5.09□□□□□ -1.59
VPS50-211ENST00000474412 NOL3O60936 208 aaKnown RBP5.09□□□□□ -1.59
VPS50-211ENST00000474412 ERHP84090 104 aaKnown RBP5.09□□□□□ -1.59
VPS50-211ENST00000474412 AARDQ4LEZ3 155 aa5.09□□□□□ -1.59
VPS50-211ENST00000474412 TCF24Q7RTU0 167 aa5.09□□□□□ -1.59
VPS50-211ENST00000474412 TMEM116Q8NCL8 245 aa5.09□□□□□ -1.59
VPS50-211ENST00000474412 RRNAD1Q96FB5 475 aaKnown RBP5.09□□□□□ -1.59
VPS50-211ENST00000474412 ATP6V0BQ99437 205 aa5.09□□□□□ -1.59
VPS50-211ENST00000474412 BCL7BQ9BQE9 202 aa5.09□□□□□ -1.59
VPS50-211ENST00000474412 PDCD10Q9BUL8 212 aa5.09□□□□□ -1.59
VPS50-211ENST00000474412 MCUBQ9NWR8 336 aa5.09□□□□□ -1.59
VPS50-211ENST00000474412 A0A0J9YWU9 116 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 hDV102S1A0JD36 115 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 CCDC160A6NGH7 325 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 CEBPZOSA8MTT3 80 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 K7EMT4 169 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 CLN5O75503 358 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 DFFBO76075 338 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 TMEM50AO95807 157 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 IGKV1-17P01599 117 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 AKR1C4P17516 323 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 SNCAP37840 140 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 RND2P52198 227 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 RELQ04864 619 aaPredicted RBP5.08□□□□□ -1.6
VPS50-211ENST00000474412 SURF2Q15527 256 aaPredicted RBP5.08□□□□□ -1.6
VPS50-211ENST00000474412 NMSQ5H8A3 153 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 LEMD1Q68G75 181 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 ZNF600Q6ZNG1 722 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 LYZL2Q7Z4W2 148 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 TMED4Q7Z7H5 227 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 SLC24A4Q8NFF2 622 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 C15orf40Q8WUR7 153 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 PRRT1Q99946 306 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 VSIRQ9H7M9 311 aa5.08□□□□□ -1.6
VPS50-211ENST00000474412 DNAH1Q9P2D7 4330 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 FABP12A6NFH5 140 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 OR4C46A6NHA9 309 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 IGLC1P0CG04 106 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 NPY1RP25929 384 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 SPCS3P61009 180 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 TNFRSF9Q07011 255 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 PLECQ15149 4684 aaKnown RBP5.07□□□□□ -1.6
VPS50-211ENST00000474412 USF2Q15853 346 aaPredicted RBP5.07□□□□□ -1.6
VPS50-211ENST00000474412 ANKRD55Q3KP44 614 aa5.07□□□□□ -1.6
VPS50-211ENST00000474412 LAMTOR1Q6IAA8 161 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms