RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 NPIPB13A6NJU9 1138 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 A8MWL6 223 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 NPIPB4C9JG80 1138 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 PGLYRP1O75594 196 aaPredicted RBP4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 MT-CO3P00414 261 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 CISD3P0C7P0 127 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 FCGR2AP12318 317 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 RPL30P62888 115 aaKnown RBP4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 TNFAIP6P98066 277 aaPredicted RBP4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 TFF3Q07654 80 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 FXYD3Q14802 87 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 TBC1D28Q2M2D7 210 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 GDF5OSQ5U4N7 250 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 LYRM7Q5U5X0 104 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 CEND1Q8N111 149 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 LINC00476Q8WZB0 136 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 ZNF503Q96F45 646 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 CHAC1Q9BUX1 264 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 IDI2-AS1Q9NZ38 188 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 LINC00473A8K010 186 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 K7ERJ3 54 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 IGKV1D-16P01601 117 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 HLA-DRB4P13762 266 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 GCHFRP30047 84 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 EMP1P54849 157 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 ZNF77Q15935 545 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 MRPL23Q16540 153 aaKnown RBP4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 FADS6Q8N9I5 356 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 OR1L8Q8NGR8 309 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 TMEM101Q96IK0 257 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 KIR2DL4Q99706 377 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 ASCL2Q99929 193 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 PRADC1Q9BSG0 188 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 STARD5Q9NSY2 213 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 IL36RNQ9UBH0 155 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 WDR83OSQ9Y284 106 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 HLA-DRB4X5D2U9 266 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 NCOA6Q14686 2063 aaPredicted RBP4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 PMS2P5A8MQ11 134 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 SHISA9B4DS77 424 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 NPFFO15130 113 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 TNFSF14O43557 240 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 CD27P26842 260 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 DSCR4P56555 118 aaPredicted RBP4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 HBBP68871 147 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 SPRNQ5BIV9 151 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 AMTNQ6UX39 209 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 DGAT2L6Q6ZPD8 337 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 RBPMS2Q6ZRY4 209 aaKnown RBP4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 ZDHHC23Q8IYP9 409 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 WFDC5Q8TCV5 224 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 CARD19Q96LW7 228 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 PRYO14603 147 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 NDUFS7O75251 213 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 DHRS3O75911 302 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 STATHP02808 62 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 C8orf88P0DMB2 117 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 BCL3P20749 454 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 C12orf74Q32Q52 190 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 NT5CQ8TCD5 201 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 ALKBH4Q9NXW9 302 aa4.13□□□□□ -1.75
TMEM39A-206ENST00000473684 TRAV24A0A0B4J272 114 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 PRKNO60260 465 aaPredicted RBP4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 NDUFA7O95182 113 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 OR2H2O95918 312 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 ACP1P24666 158 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 HES1Q14469 280 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 EDDM3AQ14507 147 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 RHBDD2Q6NTF9 364 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 Q6ZSR3 168 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 SBSPONQ8IVN8 264 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 Q8N7P7 452 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 DUX3Q96PT4 197 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 CCL28Q9NRJ3 127 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 BEX4Q9NWD9 120 aaPredicted RBP4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 PIGLQ9Y2B2 252 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 MPDZO75970 2070 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 TCF20Q9UGU0 1960 aaKnown RBP4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 TRAV4A0A0B4J268 109 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 MGST3O14880 152 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 DUSP14O95147 198 aaKnown RBP4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 CLDN14O95500 239 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 IGLV2-8P01709 118 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 IGLV3-1P01715 115 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 TMEM116Q8NCL8 245 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 OR1L4Q8NGR5 311 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 IGF2BP2-AS1Q96M15 143 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 MCRIP2Q9BUT9 160 aaKnown RBP4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 OR2H1Q9GZK4 316 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 TMEM167BQ9NRX6 74 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 SHANK1Q9Y566 2161 aa4.12□□□□□ -1.75
TMEM39A-206ENST00000473684 FREM3P0C091 2139 aa4.11□□□□□ -1.75
TMEM39A-206ENST00000473684 THADAQ6YHU6 1953 aa4.11□□□□□ -1.75
TMEM39A-206ENST00000473684 IGKV1D-13A0A0B4J2D9 117 aa4.11□□□□□ -1.75
TMEM39A-206ENST00000473684 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
TMEM39A-206ENST00000473684 CRLF1O75462 422 aa4.11□□□□□ -1.75
TMEM39A-206ENST00000473684 IGKV1-5P01602 117 aa4.11□□□□□ -1.75
TMEM39A-206ENST00000473684 IGKV1-13P0DP09 117 aa4.11□□□□□ -1.75
TMEM39A-206ENST00000473684 NMUP48645 174 aa4.11□□□□□ -1.75
TMEM39A-206ENST00000473684 RBM11P57052 281 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms