RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ALKBH7Q9BT30 221 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-207ENST00000473212 TNFRSF19Q9NS68 423 aa16.98■□□□□ 0.31
COL18A1-207ENST00000473212 RPH3ALQ9UNE2 315 aa16.98■□□□□ 0.31
COL18A1-207ENST00000473212 FAM181BA6NEQ2 426 aa16.98■□□□□ 0.31
COL18A1-207ENST00000473212 CEACAM8P31997 349 aaPredicted RBP16.98■□□□□ 0.31
COL18A1-207ENST00000473212 EBLN2Q6P2I7 272 aa16.98■□□□□ 0.31
COL18A1-207ENST00000473212 KLHDC1Q8N7A1 406 aa16.98■□□□□ 0.31
COL18A1-207ENST00000473212 C7orf69Q9H7B7 122 aa16.98■□□□□ 0.31
COL18A1-207ENST00000473212 MOSP00540 346 aa16.97■□□□□ 0.31
COL18A1-207ENST00000473212 ORM2P19652 201 aa16.97■□□□□ 0.31
COL18A1-207ENST00000473212 UBE2G1P62253 170 aa16.97■□□□□ 0.31
COL18A1-207ENST00000473212 BSPH1Q075Z2 132 aa16.97■□□□□ 0.31
COL18A1-207ENST00000473212 SAP30LQ9HAJ7 183 aa16.97■□□□□ 0.31
COL18A1-207ENST00000473212 C17orf100A8MU93 164 aa16.97■□□□□ 0.31
COL18A1-207ENST00000473212 SIAH2O43255 324 aa16.97■□□□□ 0.31
COL18A1-207ENST00000473212 SLC25A17O43808 307 aa16.97■□□□□ 0.31
COL18A1-207ENST00000473212 SLC25A5P05141 298 aaKnown RBP16.97■□□□□ 0.31
COL18A1-207ENST00000473212 HIST1H1EP10412 219 aaKnown RBP16.97■□□□□ 0.31
COL18A1-207ENST00000473212 SUB1P53999 127 aaKnown RBP eCLIP16.97■□□□□ 0.31
COL18A1-207ENST00000473212 KLF5Q13887 457 aaPredicted RBP16.97■□□□□ 0.31
COL18A1-207ENST00000473212 Q56UQ5 140 aa16.97■□□□□ 0.31
COL18A1-207ENST00000473212 CTSZQ9UBR2 303 aa16.97■□□□□ 0.31
COL18A1-207ENST00000473212 A0A0G2JNJ9 132 aa16.96■□□□□ 0.31
COL18A1-207ENST00000473212 NDUFB8O95169 186 aa16.96■□□□□ 0.31
COL18A1-207ENST00000473212 HCP5Q6MZN7 132 aa16.96■□□□□ 0.31
COL18A1-207ENST00000473212 IGFL3Q6UXB1 125 aa16.96■□□□□ 0.31
COL18A1-207ENST00000473212 PDPNQ86YL7 162 aa16.96■□□□□ 0.31
COL18A1-207ENST00000473212 THAP8Q8NA92 274 aa16.96■□□□□ 0.31
COL18A1-207ENST00000473212 Q9UFV3 132 aa16.96■□□□□ 0.31
COL18A1-207ENST00000473212 H3BTX0 84 aa16.96■□□□□ 0.3
COL18A1-207ENST00000473212 IGLV2-23P01705 113 aa16.96■□□□□ 0.3
COL18A1-207ENST00000473212 MYCNOSP40205 109 aa16.96■□□□□ 0.3
COL18A1-207ENST00000473212 OR1B1Q8NGR6 318 aa16.96■□□□□ 0.3
COL18A1-207ENST00000473212 VSTM2AQ8TAG5 236 aa16.96■□□□□ 0.3
COL18A1-207ENST00000473212 EPDR1Q9UM22 224 aa16.96■□□□□ 0.3
COL18A1-207ENST00000473212 PGPA6NDG6 321 aa16.95■□□□□ 0.3
COL18A1-207ENST00000473212 PRB4P10163 310 aaPredicted RBP16.95■□□□□ 0.3
COL18A1-207ENST00000473212 MEF2CQ06413 473 aaPredicted RBP16.95■□□□□ 0.3
COL18A1-207ENST00000473212 TCF24Q7RTU0 167 aa16.95■□□□□ 0.3
COL18A1-207ENST00000473212 OR2D3Q8NGH3 330 aa16.95■□□□□ 0.3
COL18A1-207ENST00000473212 CHRDL1Q9BU40 450 aa16.95■□□□□ 0.3
COL18A1-207ENST00000473212 SSUH2Q9Y2M2 353 aa16.95■□□□□ 0.3
COL18A1-207ENST00000473212 MALRD1Q5VYJ5 2156 aa16.95■□□□□ 0.3
COL18A1-207ENST00000473212 THBDP07204 575 aa16.95■□□□□ 0.3
COL18A1-207ENST00000473212 PMCHL1Q16048 86 aa16.95■□□□□ 0.3
COL18A1-207ENST00000473212 OR4A5Q8NH83 315 aa16.95■□□□□ 0.3
COL18A1-207ENST00000473212 PTPRZ1P23471 2315 aaPredicted RBP16.94■□□□□ 0.3
COL18A1-207ENST00000473212 A0A1W2PPI3 338 aa16.94■□□□□ 0.3
COL18A1-207ENST00000473212 OR2J3O76001 311 aa16.94■□□□□ 0.3
COL18A1-207ENST00000473212 TSPOP30536 169 aa16.94■□□□□ 0.3
COL18A1-207ENST00000473212 C22orf46C9J442 243 aa16.94■□□□□ 0.3
COL18A1-207ENST00000473212 CNTFRP26992 372 aa16.94■□□□□ 0.3
COL18A1-207ENST00000473212 MRGPRG-AS1Q2M3A8 158 aa16.94■□□□□ 0.3
COL18A1-207ENST00000473212 TMEM108Q6UXF1 575 aa16.94■□□□□ 0.3
COL18A1-207ENST00000473212 KIR3DL3Q8N743 410 aa16.94■□□□□ 0.3
COL18A1-207ENST00000473212 OR8B3Q8NGG8 313 aa16.94■□□□□ 0.3
COL18A1-207ENST00000473212 FAM57AQ8TBR7 257 aa16.94■□□□□ 0.3
COL18A1-207ENST00000473212 OR8B2Q96RD0 313 aa16.94■□□□□ 0.3
COL18A1-207ENST00000473212 TCF21O43680 179 aa16.93■□□□□ 0.3
COL18A1-207ENST00000473212 TNFRSF1AP19438 455 aa16.93■□□□□ 0.3
COL18A1-207ENST00000473212 HINT1P49773 126 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-207ENST00000473212 LINC00322Q6ZN03 302 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-207ENST00000473212 GSX1Q9H4S2 264 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-207ENST00000473212 CEP295Q9C0D2 2601 aa16.93■□□□□ 0.3
COL18A1-207ENST00000473212 A0A1B0GXF2 115 aa16.93■□□□□ 0.3
COL18A1-207ENST00000473212 CD24P25063 80 aa16.93■□□□□ 0.3
COL18A1-207ENST00000473212 WASHC3Q9Y3C0 194 aa16.93■□□□□ 0.3
COL18A1-207ENST00000473212 C2orf70A6NJV1 201 aa16.92■□□□□ 0.3
COL18A1-207ENST00000473212 TMEM178BH3BS89 294 aa16.92■□□□□ 0.3
COL18A1-207ENST00000473212 LEMD1Q68G75 181 aa16.92■□□□□ 0.3
COL18A1-207ENST00000473212 NUP37Q8NFH4 326 aa16.92■□□□□ 0.3
COL18A1-207ENST00000473212 PERPQ96FX8 193 aa16.92■□□□□ 0.3
COL18A1-207ENST00000473212 CLEC5AQ9NY25 188 aa16.92■□□□□ 0.3
COL18A1-207ENST00000473212 ABCA4P78363 2273 aa16.92■□□□□ 0.3
COL18A1-207ENST00000473212 PPIAL4EA0A075B759 164 aa16.92■□□□□ 0.3
COL18A1-207ENST00000473212 TRAV9-2A0A087WT02 112 aa16.92■□□□□ 0.3
COL18A1-207ENST00000473212 PPIAL4DF5H284 164 aa16.92■□□□□ 0.3
COL18A1-207ENST00000473212 KLK10O43240 276 aa16.92■□□□□ 0.3
COL18A1-207ENST00000473212 ENSAO43768 121 aaKnown RBP16.92■□□□□ 0.3
COL18A1-207ENST00000473212 PPIAL4FP0DN26 164 aa16.92■□□□□ 0.3
COL18A1-207ENST00000473212 SPATA12Q7Z6I5 190 aa16.92■□□□□ 0.3
COL18A1-207ENST00000473212 URB1-AS1Q96HZ7 61 aa16.92■□□□□ 0.3
COL18A1-207ENST00000473212 PPP1R14DQ9NXH3 145 aa16.92■□□□□ 0.3
COL18A1-207ENST00000473212 TLN1Q9Y490 2541 aaKnown RBP16.91■□□□□ 0.3
COL18A1-207ENST00000473212 SH2D7A6NKC9 451 aaPredicted RBP16.91■□□□□ 0.3
COL18A1-207ENST00000473212 ATP5L2Q7Z4Y8 100 aa16.91■□□□□ 0.3
COL18A1-207ENST00000473212 ST6GALNAC6Q969X2 333 aa16.91■□□□□ 0.3
COL18A1-207ENST00000473212 TMEM186Q96B77 213 aa16.91■□□□□ 0.3
COL18A1-207ENST00000473212 GPR82Q96P67 336 aa16.91■□□□□ 0.3
COL18A1-207ENST00000473212 RBM14Q96PK6 669 aaKnown RBP16.91■□□□□ 0.3
COL18A1-207ENST00000473212 M0QZ24 198 aa16.91■□□□□ 0.3
COL18A1-207ENST00000473212 NBEAP1P0C6P0 100 aa16.91■□□□□ 0.3
COL18A1-207ENST00000473212 Q71RC1 249 aaPredicted RBP16.91■□□□□ 0.3
COL18A1-207ENST00000473212 NBASA2RRP1 2371 aa16.9■□□□□ 0.3
COL18A1-207ENST00000473212 C16orf97H3BN30 126 aa16.9■□□□□ 0.3
COL18A1-207ENST00000473212 IGLL1P15814 213 aa16.9■□□□□ 0.3
COL18A1-207ENST00000473212 LOXP28300 417 aaPredicted RBP16.9■□□□□ 0.3
COL18A1-207ENST00000473212 FOXA3P55318 350 aaPredicted RBP16.9■□□□□ 0.3
COL18A1-207ENST00000473212 HBBP68871 147 aa16.9■□□□□ 0.3
COL18A1-207ENST00000473212 Q6ZVH6 145 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms