RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 METTL26Q96S19 204 aa15.14■□□□□ 0.01
SF1-213ENST00000472725 UQCC1Q9NVA1 299 aa15.14■□□□□ 0.01
SF1-213ENST00000472725 SMPXQ9UHP9 88 aa15.14■□□□□ 0.01
SF1-213ENST00000472725 TRAV25A0A0B4J276 109 aa15.13■□□□□ 0.01
SF1-213ENST00000472725 A0A1W2PS18 150 aa15.13■□□□□ 0.01
SF1-213ENST00000472725 CRYBB3P26998 211 aa15.13■□□□□ 0.01
SF1-213ENST00000472725 TMEM217Q8N7C4 229 aa15.13■□□□□ 0.01
SF1-213ENST00000472725 NARS2Q96I59 477 aaKnown RBP15.13■□□□□ 0.01
SF1-213ENST00000472725 TMEM147Q9BVK8 224 aa15.13■□□□□ 0.01
SF1-213ENST00000472725 TMEM231Q9H6L2 316 aa15.13■□□□□ 0.01
SF1-213ENST00000472725 PFDN2Q9UHV9 154 aa15.13■□□□□ 0.01
SF1-213ENST00000472725 LSM4Q9Y4Z0 139 aaKnown RBP15.13■□□□□ 0.01
SF1-213ENST00000472725 WI2-2373I1.2A0A1W2PRP0 233 aa15.12■□□□□ 0.01
SF1-213ENST00000472725 IL4P05112 153 aa15.12■□□□□ 0.01
SF1-213ENST00000472725 NUP62P37198 522 aaPredicted RBP15.12■□□□□ 0.01
SF1-213ENST00000472725 ZNF90Q03938 601 aa15.12■□□□□ 0.01
SF1-213ENST00000472725 RAB31Q13636 194 aa15.12■□□□□ 0.01
SF1-213ENST00000472725 BPIFCQ8NFQ6 507 aa15.12■□□□□ 0.01
SF1-213ENST00000472725 RNF125Q96EQ8 232 aa15.12■□□□□ 0.01
SF1-213ENST00000472725 ZNF256Q9Y2P7 627 aaPredicted RBP15.12■□□□□ 0.01
SF1-213ENST00000472725 RPL12P30050 165 aaKnown RBP15.11■□□□□ 0.01
SF1-213ENST00000472725 S100A7P31151 101 aa15.11■□□□□ 0.01
SF1-213ENST00000472725 LAMTOR1Q6IAA8 161 aa15.11■□□□□ 0.01
SF1-213ENST00000472725 CYP2G1PQ6ZSU1 146 aa15.11■□□□□ 0.01
SF1-213ENST00000472725 VSIRQ9H7M9 311 aa15.11■□□□□ 0.01
SF1-213ENST00000472725 MLXQ9UH92 298 aa15.11■□□□□ 0.01
SF1-213ENST00000472725 SLC45A2Q9UMX9 530 aa15.11■□□□□ 0.01
SF1-213ENST00000472725 IGHV3OR16-8A0A075B7F1 116 aa15.1■□□□□ 0.01
SF1-213ENST00000472725 CHEK1O14757 476 aa15.1■□□□□ 0.01
SF1-213ENST00000472725 ZNF207O43670 478 aaKnown RBP15.1■□□□□ 0.01
SF1-213ENST00000472725 MPDU1O75352 247 aa15.1■□□□□ 0.01
SF1-213ENST00000472725 HNRNPCP07910 306 aaKnown RBP eCLIP15.1■□□□□ 0.01
SF1-213ENST00000472725 KRTAP10-11P60412 298 aa15.1■□□□□ 0.01
SF1-213ENST00000472725 NHLH2Q02577 135 aa15.1■□□□□ 0.01
SF1-213ENST00000472725 CD300EQ496F6 205 aaPredicted RBP15.1■□□□□ 0.01
SF1-213ENST00000472725 ZNF546Q86UE3 836 aa15.1■□□□□ 0.01
SF1-213ENST00000472725 OR5C1Q8NGR4 320 aa15.1■□□□□ 0.01
SF1-213ENST00000472725 OR2T35Q8NGX2 323 aa15.1■□□□□ 0.01
SF1-213ENST00000472725 CHAC2Q8WUX2 184 aa15.1■□□□□ 0.01
SF1-213ENST00000472725 RHPN1-AS1Q9BWJ2 59 aa15.1■□□□□ 0.01
SF1-213ENST00000472725 RABAC1Q9UI14 185 aa15.1■□□□□ 0.01
SF1-213ENST00000472725 WDR83OSQ9Y284 106 aa15.1■□□□□ 0.01
SF1-213ENST00000472725 HSPB11Q9Y547 144 aa15.1■□□□□ 0.01
SF1-213ENST00000472725 U3KQE9 123 aa15.1■□□□□ 0.01
SF1-213ENST00000472725 SORL1Q92673 2214 aa15.09■□□□□ 0.01
SF1-213ENST00000472725 CMYA5Q8N3K9 4069 aa15.09■□□□□ 0.01
SF1-213ENST00000472725 EDN2P20800 178 aa15.09■□□□□ 0.01
SF1-213ENST00000472725 PXDC1Q5TGL8 231 aa15.09■□□□□ 0.01
SF1-213ENST00000472725 BTNL8Q6UX41 500 aa15.09■□□□□ 0.01
SF1-213ENST00000472725 GRAMD2BQ96HH9 432 aa15.09■□□□□ 0.01
SF1-213ENST00000472725 DFFBO76075 338 aa15.08■□□□□ 0
SF1-213ENST00000472725 EIF2B2P49770 351 aaKnown RBP15.08■□□□□ 0
SF1-213ENST00000472725 PLP1P60201 277 aa15.08■□□□□ 0
SF1-213ENST00000472725 USF2Q15853 346 aaPredicted RBP15.08■□□□□ 0
SF1-213ENST00000472725 RBPMS2Q6ZRY4 209 aaKnown RBP15.08■□□□□ 0
SF1-213ENST00000472725 S100A7AQ86SG5 101 aa15.08■□□□□ 0
SF1-213ENST00000472725 AQP10Q96PS8 301 aa15.08■□□□□ 0
SF1-213ENST00000472725 AGPAT2O15120 278 aa15.07■□□□□ 0
SF1-213ENST00000472725 GP9P14770 177 aa15.07■□□□□ 0
SF1-213ENST00000472725 OR2F1Q13607 317 aa15.07■□□□□ 0
SF1-213ENST00000472725 TSPAN4O14817 238 aa15.06■□□□□ 0
SF1-213ENST00000472725 CAMLGP49069 296 aa15.06■□□□□ 0
SF1-213ENST00000472725 LYZP61626 148 aa15.06■□□□□ 0
SF1-213ENST00000472725 TMEM61Q8N0U2 210 aa15.06■□□□□ 0
SF1-213ENST00000472725 INO80EQ8NBZ0 244 aaPredicted RBP15.06■□□□□ 0
SF1-213ENST00000472725 ST8SIA2Q92186 375 aa15.06■□□□□ 0
SF1-213ENST00000472725 MGST2Q99735 147 aa15.06■□□□□ 0
SF1-213ENST00000472725 ATP5SQ99766 215 aa15.06■□□□□ 0
SF1-213ENST00000472725 SPAG8Q99932 426 aaPredicted RBP15.06■□□□□ 0
SF1-213ENST00000472725 AURKAIP1Q9NWT8 199 aaPredicted RBP15.06■□□□□ 0
SF1-213ENST00000472725 RNF24Q9Y225 148 aa15.06■□□□□ 0
SF1-213ENST00000472725 NBEAL1Q6ZS30 2694 aa15.06■□□□□ 0
SF1-213ENST00000472725 UBE2L5PA0A1B0GUS4 154 aa15.05■□□□□ -0
SF1-213ENST00000472725 Q5BKY6 102 aa15.05■□□□□ -0
SF1-213ENST00000472725 C1orf194Q5T5A4 169 aa15.05■□□□□ -0
SF1-213ENST00000472725 FAM90A2PQ658T7 463 aa15.05■□□□□ -0
SF1-213ENST00000472725 RNF2Q99496 336 aa15.05■□□□□ -0
SF1-213ENST00000472725 PBDC1Q9BVG4 233 aa15.05■□□□□ -0
SF1-213ENST00000472725 NOTCH1P46531 2555 aa15.04■□□□□ -0
SF1-213ENST00000472725 HELTA6NFD8 242 aa15.04■□□□□ -0
SF1-213ENST00000472725 ZNF785A8K8V0 405 aa15.04■□□□□ -0
SF1-213ENST00000472725 BUB3O43684 328 aa15.04■□□□□ -0
SF1-213ENST00000472725 LINC00869P0C866 280 aa15.04■□□□□ -0
SF1-213ENST00000472725 RPL29P47914 159 aaKnown RBP15.04■□□□□ -0
SF1-213ENST00000472725 AP2S1P53680 142 aaPredicted RBP15.04■□□□□ -0
SF1-213ENST00000472725 DEFA6Q01524 100 aa15.04■□□□□ -0
SF1-213ENST00000472725 TMEM182Q6ZP80 229 aaPredicted RBP15.04■□□□□ -0
SF1-213ENST00000472725 PARD6GQ9BYG4 376 aaPredicted RBP15.04■□□□□ -0
SF1-213ENST00000472725 KCNIP2Q9NS61 270 aa15.04■□□□□ -0
SF1-213ENST00000472725 IGHV3-49A0A0A0MS15 119 aa15.03■□□□□ -0
SF1-213ENST00000472725 IZUMO1RA6ND01 250 aa15.03■□□□□ -0
SF1-213ENST00000472725 HYPMO75409 117 aa15.03■□□□□ -0
SF1-213ENST00000472725 APOHP02749 345 aaPredicted RBP15.03■□□□□ -0
SF1-213ENST00000472725 FGF7P21781 194 aa15.03■□□□□ -0
SF1-213ENST00000472725 GATA2P23769 480 aaPredicted RBP15.03■□□□□ -0
SF1-213ENST00000472725 PAFAH1B2P68402 229 aa15.03■□□□□ -0
SF1-213ENST00000472725 CLINT1Q14677 625 aa15.03■□□□□ -0
SF1-213ENST00000472725 OPCMLQ14982 345 aa15.03■□□□□ -0
SF1-213ENST00000472725 C16orf54Q6UWD8 224 aa15.03■□□□□ -0
SF1-213ENST00000472725 TCF24Q7RTU0 167 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms