RNA–Protein interactions for RNA: ENST00000472696.1

EPHA4-212, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-212ENST00000472696 SERF2P84101 59 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 C15orf32Q32M92 178 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 LGALSLQ3ZCW2 172 aaPredicted RBP4.56□□□□□ -1.68
EPHA4-212ENST00000472696 RNF212Q495C1 297 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 SPINK9Q5DT21 86 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 SLC16A13Q7RTY0 426 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 ZNF491Q8N8L2 437 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 THAP8Q8NA92 274 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 BPIFCQ8NFQ6 507 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 STOML3Q8TAV4 291 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 SCGB1C1Q8TD33 95 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 SCARB1Q8WTV0 552 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 RNF141Q8WVD5 230 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 TMEM170AQ8WVE7 144 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 RBMXL1Q96E39 390 aaKnown RBP4.56□□□□□ -1.68
EPHA4-212ENST00000472696 GNPNAT1Q96EK6 184 aaPredicted RBP4.56□□□□□ -1.68
EPHA4-212ENST00000472696 PHYHIPLQ96FC7 376 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 MISP3Q96FF7 219 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 NOL4LQ96MY1 436 aaPredicted RBP4.56□□□□□ -1.68
EPHA4-212ENST00000472696 OR4C12Q96R67 309 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 TRGV9Q99603 122 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 PSMG3Q9BT73 122 aaPredicted RBP4.56□□□□□ -1.68
EPHA4-212ENST00000472696 WDR61Q9GZS3 305 aaKnown RBP4.56□□□□□ -1.68
EPHA4-212ENST00000472696 ARL6Q9H0F7 186 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 WDR83OSQ9Y284 106 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 LSM4Q9Y4Z0 139 aaKnown RBP4.56□□□□□ -1.68
EPHA4-212ENST00000472696 TIMM9Q9Y5J7 89 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 TSSC4Q9Y5U2 329 aaPredicted RBP4.56□□□□□ -1.68
EPHA4-212ENST00000472696 CUBNO60494 3623 aa4.56□□□□□ -1.68
EPHA4-212ENST00000472696 A0A087WWL8 130 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 HELTA6NFD8 242 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 K7EQM0 130 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 NUPL2O15504 423 aaKnown RBP4.55□□□□□ -1.68
EPHA4-212ENST00000472696 GNG7O60262 68 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 OR2J3O76001 311 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 NDUFB8O95169 186 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 MBP02144 154 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 HSPB1P04792 205 aaKnown RBP4.55□□□□□ -1.68
EPHA4-212ENST00000472696 SEC11BP0C7V7 166 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 TPT1P13693 172 aaKnown RBP4.55□□□□□ -1.68
EPHA4-212ENST00000472696 RPL29P47914 159 aaKnown RBP4.55□□□□□ -1.68
EPHA4-212ENST00000472696 MFAP2P55001 183 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 AKR1C1Q04828 323 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 KIAA0141Q14154 515 aaPredicted RBP4.55□□□□□ -1.68
EPHA4-212ENST00000472696 LBHQ53QV2 105 aaPredicted RBP4.55□□□□□ -1.68
EPHA4-212ENST00000472696 OR8G2PQ6IF36 304 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 ACSM6Q6P461 480 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 TREML4Q6UXN2 200 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 Q6ZRG5 221 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 TMUB2Q71RG4 321 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 NDUFA11Q86Y39 141 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 TMEM217Q8N7C4 229 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 ZNF709Q8N972 641 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 ZNF502Q8TBZ5 544 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 C4orf3Q8WVX3 66 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 TAF15Q92804 592 aaKnown RBP eCLIP4.55□□□□□ -1.68
EPHA4-212ENST00000472696 RNF2Q99496 336 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 HRH4Q9H3N8 390 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 FNDC4Q9H6D8 234 aaPredicted RBP4.55□□□□□ -1.68
EPHA4-212ENST00000472696 ZFAND3Q9H8U3 227 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 PEF1Q9UBV8 284 aaKnown RBP4.55□□□□□ -1.68
EPHA4-212ENST00000472696 LINC00527Q9UJ94 153 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 SLC45A2Q9UMX9 530 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 TLN2Q9Y4G6 2542 aa4.55□□□□□ -1.68
EPHA4-212ENST00000472696 SETXQ7Z333 2677 aaKnown RBP4.55□□□□□ -1.68
EPHA4-212ENST00000472696 FN1P02751 2386 aaKnown RBP4.55□□□□□ -1.68
EPHA4-212ENST00000472696 NSD1Q96L73 2696 aaPredicted RBP4.54□□□□□ -1.68
EPHA4-212ENST00000472696 ELOA3CA0A087WX78 387 aaPredicted RBP4.54□□□□□ -1.68
EPHA4-212ENST00000472696 LOC102723971A0A1B0GUV8 181 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 TCRBV4S1A1TA0A5B7 111 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 ZFP92A6NM28 416 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 LINC00587B1AMM8 73 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 UMAD1C9J7I0 102 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 SMLR1H3BR10 107 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 TEX46H3BTG2 121 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 DNASE2O00115 360 aaPredicted RBP4.54□□□□□ -1.68
EPHA4-212ENST00000472696 NDUFA4O00483 81 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 TGOLN2O43493 480 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 GGCTO75223 188 aaKnown RBP4.54□□□□□ -1.68
EPHA4-212ENST00000472696 TOMM40O96008 361 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 CD5P06127 495 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 LGALS1P09382 135 aaKnown RBP4.54□□□□□ -1.68
EPHA4-212ENST00000472696 IGLC1P0CG04 106 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 APELAP0DMC3 54 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 CXCL2P19875 107 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 RAB4AP20338 218 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 OR10J1P30954 320 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 RAB5CP51148 216 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 ELLP55199 621 aaPredicted RBP4.54□□□□□ -1.68
EPHA4-212ENST00000472696 RIPPLY3P57055 190 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 PLP1P60201 277 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 ARL16Q0P5N6 197 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 OPCMLQ14982 345 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 KRTAP21-3Q3LHN1 58 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 FAM106AQ4KMX7 169 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 Q56UQ5 140 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 AWAT1Q58HT5 328 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 ZNF329Q86UD4 541 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 HAPLN4Q86UW8 402 aa4.54□□□□□ -1.68
EPHA4-212ENST00000472696 GPHB5Q86YW7 130 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms