RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 RBMY1FQ15415 496 aaKnown RBP16.37■□□□□ 0.21
C9orf3-213ENST00000471978 CLEC5AQ9NY25 188 aa16.37■□□□□ 0.21
C9orf3-213ENST00000471978 FAM90A26D6RGX4 464 aa16.36■□□□□ 0.21
C9orf3-213ENST00000471978 DEDDO75618 318 aa16.36■□□□□ 0.21
C9orf3-213ENST00000471978 MIFP14174 115 aa16.36■□□□□ 0.21
C9orf3-213ENST00000471978 SNRPD3P62318 126 aaKnown RBP16.36■□□□□ 0.21
C9orf3-213ENST00000471978 KLF9Q13886 244 aaPredicted RBP16.36■□□□□ 0.21
C9orf3-213ENST00000471978 SIGLEC15Q6ZMC9 328 aa16.36■□□□□ 0.21
C9orf3-213ENST00000471978 OR51G1Q8NGK1 321 aa16.36■□□□□ 0.21
C9orf3-213ENST00000471978 OR1S1Q8NH92 325 aa16.36■□□□□ 0.21
C9orf3-213ENST00000471978 NRN1Q9NPD7 142 aa16.36■□□□□ 0.21
C9orf3-213ENST00000471978 DNAH10Q8IVF4 4471 aa16.35■□□□□ 0.21
C9orf3-213ENST00000471978 ZNF705EA8MWA4 302 aaPredicted RBP16.35■□□□□ 0.21
C9orf3-213ENST00000471978 FAUP35544 74 aaKnown RBP16.35■□□□□ 0.21
C9orf3-213ENST00000471978 ATP5IP56385 69 aaPredicted RBP16.35■□□□□ 0.21
C9orf3-213ENST00000471978 RNF125Q96EQ8 232 aa16.35■□□□□ 0.21
C9orf3-213ENST00000471978 HRH4Q9H3N8 390 aa16.35■□□□□ 0.21
C9orf3-213ENST00000471978 X6R8D5 127 aa16.35■□□□□ 0.21
C9orf3-213ENST00000471978 GPX4P36969 197 aaPredicted RBP16.34■□□□□ 0.21
C9orf3-213ENST00000471978 TMED4Q7Z7H5 227 aa16.34■□□□□ 0.21
C9orf3-213ENST00000471978 CSNK1G2-AS1Q8NCQ2 148 aa16.34■□□□□ 0.21
C9orf3-213ENST00000471978 PBDC1Q9BVG4 233 aa16.34■□□□□ 0.21
C9orf3-213ENST00000471978 SEPSECSQ9HD40 501 aaKnown RBP16.34■□□□□ 0.21
C9orf3-213ENST00000471978 TBC1D24Q9ULP9 559 aa16.34■□□□□ 0.21
C9orf3-213ENST00000471978 PIGBOS1A0A0B4J2F0 54 aa16.33■□□□□ 0.2
C9orf3-213ENST00000471978 ZFP92A6NM28 416 aa16.33■□□□□ 0.2
C9orf3-213ENST00000471978 GAMTQ14353 236 aa16.33■□□□□ 0.2
C9orf3-213ENST00000471978 PYDC2Q56P42 97 aa16.33■□□□□ 0.2
C9orf3-213ENST00000471978 SLC35E1Q96K37 410 aa16.33■□□□□ 0.2
C9orf3-213ENST00000471978 IGLL5B9A064 214 aa16.32■□□□□ 0.2
C9orf3-213ENST00000471978 C11orf94C9JXX5 98 aa16.32■□□□□ 0.2
C9orf3-213ENST00000471978 NUP62P37198 522 aaPredicted RBP16.32■□□□□ 0.2
C9orf3-213ENST00000471978 TCTAP57738 103 aa16.32■□□□□ 0.2
C9orf3-213ENST00000471978 AP3S2P59780 193 aa16.32■□□□□ 0.2
C9orf3-213ENST00000471978 ZNF90Q03938 601 aa16.32■□□□□ 0.2
C9orf3-213ENST00000471978 TMEM128Q5BJH2 165 aa16.32■□□□□ 0.2
C9orf3-213ENST00000471978 TOMM5Q8N4H5 51 aa16.32■□□□□ 0.2
C9orf3-213ENST00000471978 TRIM63Q969Q1 353 aa16.32■□□□□ 0.2
C9orf3-213ENST00000471978 PFDN2Q9UHV9 154 aa16.32■□□□□ 0.2
C9orf3-213ENST00000471978 ELOA3CA0A087WX78 387 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-213ENST00000471978 DUXBA0A1W2PPF3 345 aa16.31■□□□□ 0.2
C9orf3-213ENST00000471978 HLA-DMBP28068 263 aa16.31■□□□□ 0.2
C9orf3-213ENST00000471978 NUTF2P61970 127 aaKnown RBP16.31■□□□□ 0.2
C9orf3-213ENST00000471978 OR8G2PQ6IF36 304 aa16.31■□□□□ 0.2
C9orf3-213ENST00000471978 IGKV1D-37A0A075B6S9 117 aa16.3■□□□□ 0.2
C9orf3-213ENST00000471978 H3BMM0 161 aa16.3■□□□□ 0.2
C9orf3-213ENST00000471978 PITX3O75364 302 aa16.3■□□□□ 0.2
C9orf3-213ENST00000471978 CENPSQ8N2Z9 138 aa16.3■□□□□ 0.2
C9orf3-213ENST00000471978 C1QTNF4Q9BXJ3 329 aa16.3■□□□□ 0.2
C9orf3-213ENST00000471978 FABP1P07148 127 aa16.29■□□□□ 0.2
C9orf3-213ENST00000471978 IAPPP10997 89 aa16.29■□□□□ 0.2
C9orf3-213ENST00000471978 VAMP1P23763 118 aa16.29■□□□□ 0.2
C9orf3-213ENST00000471978 Q6ZTC4 211 aa16.29■□□□□ 0.2
C9orf3-213ENST00000471978 XCL2Q9UBD3 114 aa16.29■□□□□ 0.2
C9orf3-213ENST00000471978 APLNQ9ULZ1 77 aa16.29■□□□□ 0.2
C9orf3-213ENST00000471978 V9GYH0 126 aa16.29■□□□□ 0.2
C9orf3-213ENST00000471978 HLA-DRB4P13762 266 aa16.28■□□□□ 0.2
C9orf3-213ENST00000471978 NKX2-1P43699 371 aaPredicted RBP16.28■□□□□ 0.2
C9orf3-213ENST00000471978 LYZP61626 148 aa16.28■□□□□ 0.2
C9orf3-213ENST00000471978 RAB11AP62491 216 aa16.28■□□□□ 0.2
C9orf3-213ENST00000471978 LRTM2Q8N967 370 aa16.28■□□□□ 0.2
C9orf3-213ENST00000471978 PAIP2BQ9ULR5 123 aaKnown RBP16.28■□□□□ 0.2
C9orf3-213ENST00000471978 HLA-DRB4X5D2U9 266 aa16.28■□□□□ 0.2
C9orf3-213ENST00000471978 TRAV10A0A0B4J240 114 aa16.27■□□□□ 0.2
C9orf3-213ENST00000471978 SNRPGP15A8MWD9 76 aa16.27■□□□□ 0.2
C9orf3-213ENST00000471978 SLC25A6P12236 298 aa16.27■□□□□ 0.2
C9orf3-213ENST00000471978 PRR20EP86478 221 aa16.27■□□□□ 0.2
C9orf3-213ENST00000471978 PRR20CP86479 221 aa16.27■□□□□ 0.2
C9orf3-213ENST00000471978 PRR20DP86480 221 aa16.27■□□□□ 0.2
C9orf3-213ENST00000471978 PRR20BP86481 221 aa16.27■□□□□ 0.2
C9orf3-213ENST00000471978 PRR20AP86496 221 aa16.27■□□□□ 0.2
C9orf3-213ENST00000471978 SLC25A21Q9BQT8 299 aaPredicted RBP16.27■□□□□ 0.2
C9orf3-213ENST00000471978 WDR12Q9GZL7 423 aaKnown RBP16.27■□□□□ 0.2
C9orf3-213ENST00000471978 MED6O75586 246 aa16.26■□□□□ 0.19
C9orf3-213ENST00000471978 S100A5P33763 92 aa16.26■□□□□ 0.19
C9orf3-213ENST00000471978 OR2F1Q13607 317 aa16.26■□□□□ 0.19
C9orf3-213ENST00000471978 ZNF79Q15937 498 aa16.26■□□□□ 0.19
C9orf3-213ENST00000471978 C1orf194Q5T5A4 169 aa16.26■□□□□ 0.19
C9orf3-213ENST00000471978 LINC00052Q96N35 136 aa16.26■□□□□ 0.19
C9orf3-213ENST00000471978 TRGV9Q99603 122 aa16.26■□□□□ 0.19
C9orf3-213ENST00000471978 TMED3Q9Y3Q3 217 aa16.26■□□□□ 0.19
C9orf3-213ENST00000471978 CCDC160A6NGH7 325 aa16.25■□□□□ 0.19
C9orf3-213ENST00000471978 SFT2D2O95562 160 aa16.25■□□□□ 0.19
C9orf3-213ENST00000471978 ID1P41134 155 aa16.25■□□□□ 0.19
C9orf3-213ENST00000471978 GDF5OSQ5U4N7 250 aa16.25■□□□□ 0.19
C9orf3-213ENST00000471978 DEDD2Q8WXF8 326 aa16.25■□□□□ 0.19
C9orf3-213ENST00000471978 PPP1R14BQ96C90 147 aa16.25■□□□□ 0.19
C9orf3-213ENST00000471978 CELA1Q9UNI1 258 aa16.25■□□□□ 0.19
C9orf3-213ENST00000471978 DNAH6Q9C0G6 4158 aa16.25■□□□□ 0.19
C9orf3-213ENST00000471978 IGKV3-20P01619 116 aa16.24■□□□□ 0.19
C9orf3-213ENST00000471978 DEFB1P60022 68 aa16.24■□□□□ 0.19
C9orf3-213ENST00000471978 RPP30P78346 268 aaKnown RBP16.24■□□□□ 0.19
C9orf3-213ENST00000471978 PPP1R1AQ13522 171 aa16.24■□□□□ 0.19
C9orf3-213ENST00000471978 CIB3Q96Q77 187 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-213ENST00000471978 MAGT1Q9H0U3 335 aa16.24■□□□□ 0.19
C9orf3-213ENST00000471978 IGKV1OR2-108A0A075B7D4 117 aa16.23■□□□□ 0.19
C9orf3-213ENST00000471978 SYNGR2O43760 224 aa16.23■□□□□ 0.19
C9orf3-213ENST00000471978 HOXB5P09067 269 aa16.23■□□□□ 0.19
C9orf3-213ENST00000471978 PSMB3P49720 205 aa16.23■□□□□ 0.19
C9orf3-213ENST00000471978 C12orf74Q32Q52 190 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms