RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 IZUMO4Q1ZYL8 232 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 RNASE10Q5GAN6 216 aaKnown RBP6.53□□□□□ -1.36
CPSF4-211ENST00000471455 SAMD13Q5VXD3 122 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 SIGLEC15Q6ZMC9 328 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 ZNF705AQ6ZN79 300 aaPredicted RBP6.53□□□□□ -1.36
CPSF4-211ENST00000471455 SNX29P2Q8IUI4 249 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 OR52E5Q8NH55 327 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 ZFAND1Q8TCF1 268 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 FNDC4Q9H6D8 234 aaPredicted RBP6.53□□□□□ -1.36
CPSF4-211ENST00000471455 HEYLQ9NQ87 328 aaPredicted RBP6.53□□□□□ -1.36
CPSF4-211ENST00000471455 GOLT1BQ9Y3E0 138 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 HLA-DRB4X5D2U9 266 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 DNAH2Q9P225 4427 aa6.53□□□□□ -1.36
CPSF4-211ENST00000471455 IGLV2-18A0A075B6J9 118 aa6.52□□□□□ -1.37
CPSF4-211ENST00000471455 ZNF705FA8MVS1 300 aaPredicted RBP6.52□□□□□ -1.37
CPSF4-211ENST00000471455 ZNF705DP0CH99 300 aaPredicted RBP6.52□□□□□ -1.37
CPSF4-211ENST00000471455 ZNF705BP0CI00 300 aaPredicted RBP6.52□□□□□ -1.37
CPSF4-211ENST00000471455 ID1P41134 155 aa6.52□□□□□ -1.37
CPSF4-211ENST00000471455 RND2P52198 227 aa6.52□□□□□ -1.37
CPSF4-211ENST00000471455 DHODHQ02127 395 aa6.52□□□□□ -1.37
CPSF4-211ENST00000471455 OXA1LQ15070 435 aa6.52□□□□□ -1.37
CPSF4-211ENST00000471455 BSXQ3C1V8 233 aa6.52□□□□□ -1.37
CPSF4-211ENST00000471455 C1orf134Q5TEV5 83 aa6.52□□□□□ -1.37
CPSF4-211ENST00000471455 SPATA31B1PQ5VZV4 182 aa6.52□□□□□ -1.37
CPSF4-211ENST00000471455 Q6ZRM9 215 aa6.52□□□□□ -1.37
CPSF4-211ENST00000471455 SLC24A4Q8NFF2 622 aa6.52□□□□□ -1.37
CPSF4-211ENST00000471455 COQ8AQ8NI60 647 aa6.52□□□□□ -1.37
CPSF4-211ENST00000471455 TP53RKQ96S44 253 aa6.52□□□□□ -1.37
CPSF4-211ENST00000471455 NIPSNAP3BQ9BS92 247 aa6.52□□□□□ -1.37
CPSF4-211ENST00000471455 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.52□□□□□ -1.37
CPSF4-211ENST00000471455 MRPL36Q9P0J6 103 aaKnown RBP6.52□□□□□ -1.37
CPSF4-211ENST00000471455 TMED3Q9Y3Q3 217 aa6.52□□□□□ -1.37
CPSF4-211ENST00000471455 DYNC1H1Q14204 4646 aaKnown RBP6.52□□□□□ -1.37
CPSF4-211ENST00000471455 ABCA13Q86UQ4 5058 aa6.52□□□□□ -1.37
CPSF4-211ENST00000471455 M0QYG6 137 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 TNFAIP8O95379 198 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 TOMM40O96008 361 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 HBE1P02100 147 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 FABP1P07148 127 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 RD3LP0DJH9 198 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 UCP1P25874 307 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 RPS19P39019 145 aaKnown RBP6.51□□□□□ -1.37
CPSF4-211ENST00000471455 AARDQ4LEZ3 155 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 C2orf83Q53S99 150 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 PRSS54Q6PEW0 395 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 FOXI2Q6ZQN5 318 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 Q6ZR54 194 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 C15orf53Q8NAA6 179 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 C15orf40Q8WUR7 153 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 CLUHP3Q96NS8 147 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 ABHD1Q96SE0 405 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 C7orf50Q9BRJ6 194 aaKnown RBP6.51□□□□□ -1.37
CPSF4-211ENST00000471455 COMMD3Q9UBI1 195 aa6.51□□□□□ -1.37
CPSF4-211ENST00000471455 IGHV3OR16-12A0A075B7B8 117 aa6.5□□□□□ -1.37
CPSF4-211ENST00000471455 CEBPZOSA8MTT3 80 aa6.5□□□□□ -1.37
CPSF4-211ENST00000471455 BUB3O43684 328 aa6.5□□□□□ -1.37
CPSF4-211ENST00000471455 HTN3P15516 51 aa6.5□□□□□ -1.37
CPSF4-211ENST00000471455 ALDH3B2P48448 385 aa6.5□□□□□ -1.37
CPSF4-211ENST00000471455 PSMB3P49720 205 aa6.5□□□□□ -1.37
CPSF4-211ENST00000471455 USF2Q15853 346 aaPredicted RBP6.5□□□□□ -1.37
CPSF4-211ENST00000471455 FAM222AQ5U5X8 452 aa6.5□□□□□ -1.37
CPSF4-211ENST00000471455 OR8G2PQ6IF36 304 aa6.5□□□□□ -1.37
CPSF4-211ENST00000471455 EBLN2Q6P2I7 272 aa6.5□□□□□ -1.37
CPSF4-211ENST00000471455 LHFPL1Q86WI0 220 aa6.5□□□□□ -1.37
CPSF4-211ENST00000471455 ZNF575Q86XF7 245 aa6.5□□□□□ -1.37
CPSF4-211ENST00000471455 OR51G1Q8NGK1 321 aa6.5□□□□□ -1.37
CPSF4-211ENST00000471455 AP3S1Q92572 193 aa6.5□□□□□ -1.37
CPSF4-211ENST00000471455 ACY3Q96HD9 319 aa6.5□□□□□ -1.37
CPSF4-211ENST00000471455 ATG101Q9BSB4 218 aa6.5□□□□□ -1.37
CPSF4-211ENST00000471455 SAV1Q9H4B6 383 aaPredicted RBP6.5□□□□□ -1.37
CPSF4-211ENST00000471455 DKK2Q9UBU2 259 aa6.5□□□□□ -1.37
CPSF4-211ENST00000471455 C14orf166Q9Y224 244 aaKnown RBP6.5□□□□□ -1.37
CPSF4-211ENST00000471455 TEX13DA0A0J9YY54 714 aaPredicted RBP6.49□□□□□ -1.37
CPSF4-211ENST00000471455 LOC102723971A0A1B0GUV8 181 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 C16orf90A8MZG2 172 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 CDK2AP2O75956 126 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 IGKV3-20P01619 116 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 TGFBR1P36897 503 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 DAD1P61803 113 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 LSM3P62310 102 aaKnown RBP6.49□□□□□ -1.37
CPSF4-211ENST00000471455 SUMO1P63165 101 aaKnown RBP6.49□□□□□ -1.37
CPSF4-211ENST00000471455 RRN3P1Q2M238 152 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 SP6Q3SY56 376 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 LCE5AQ5TCM9 118 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 MZT2AQ6P582 158 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 GSG1LQ6UXU4 331 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 OR4B1Q8NGF8 309 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 OR13C8Q8NGS7 320 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 TERB2Q8NHR7 220 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 NPIPB3Q92617 1050 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 RBPMSQ93062 196 aaKnown RBP6.49□□□□□ -1.37
CPSF4-211ENST00000471455 RNF125Q96EQ8 232 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 LINC00052Q96N35 136 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 TMEM208Q9BTX3 173 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 SCRT1Q9BWW7 348 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 TMEM222Q9H0R3 208 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 KLK11Q9UBX7 282 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 CACNG5Q9UF02 275 aa6.49□□□□□ -1.37
CPSF4-211ENST00000471455 A0A0G2JRQ6 117 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 FAM25AB3EWG3 89 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms