RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TSPAN15O95858 294 aa7.51□□□□□ -1.21
SF3A1-207ENST00000471342 HOXD3P31249 432 aaPredicted RBP7.51□□□□□ -1.21
SF3A1-207ENST00000471342 HBG1P69891 147 aa7.51□□□□□ -1.21
SF3A1-207ENST00000471342 HBG2P69892 147 aa7.51□□□□□ -1.21
SF3A1-207ENST00000471342 SPATA31B1PQ5VZV4 182 aa7.51□□□□□ -1.21
SF3A1-207ENST00000471342 SPSB3Q6PJ21 355 aa7.51□□□□□ -1.21
SF3A1-207ENST00000471342 TEPPQ6URK8 271 aa7.51□□□□□ -1.21
SF3A1-207ENST00000471342 RPP25LQ8N5L8 163 aaKnown RBP7.51□□□□□ -1.21
SF3A1-207ENST00000471342 LINC00482Q8N8I6 264 aa7.51□□□□□ -1.21
SF3A1-207ENST00000471342 INO80EQ8NBZ0 244 aaPredicted RBP7.51□□□□□ -1.21
SF3A1-207ENST00000471342 WFDC9Q8NEX5 89 aa7.51□□□□□ -1.21
SF3A1-207ENST00000471342 OR11H1Q8NG94 326 aa7.51□□□□□ -1.21
SF3A1-207ENST00000471342 OR1N2Q8NGR9 330 aa7.51□□□□□ -1.21
SF3A1-207ENST00000471342 OR2G3Q8NGZ4 309 aa7.51□□□□□ -1.21
SF3A1-207ENST00000471342 TMEM158Q8WZ71 300 aa7.51□□□□□ -1.21
SF3A1-207ENST00000471342 FAM167A-AS1Q96KT0 104 aa7.51□□□□□ -1.21
SF3A1-207ENST00000471342 ARPC5LQ9BPX5 153 aa7.51□□□□□ -1.21
SF3A1-207ENST00000471342 IGHV3OR16-8A0A075B7F1 116 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 A0A1W2PRX2 142 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 A8MWP6 167 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 CCL24O00175 119 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 LGALS9O00182 355 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 GGCTO75223 188 aaKnown RBP7.5□□□□□ -1.21
SF3A1-207ENST00000471342 EIF3GO75821 320 aaKnown RBP eCLIP7.5□□□□□ -1.21
SF3A1-207ENST00000471342 DFFBO76075 338 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 FGF7P21781 194 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 CRYBB3P26998 211 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 ARL3P36405 182 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 NPBWR1P48145 328 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 FAM90A2PQ658T7 463 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 ETFRF1Q6IPR1 90 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 REC114Q7Z4M0 266 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 KLHL30-AS1Q8NEE0 82 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 BPIFCQ8NFQ6 507 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 TMEM190Q8WZ59 177 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 SLC35E1Q96K37 410 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 TIMM9Q9Y5J7 89 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 PUS1Q9Y606 427 aaKnown RBP eCLIP7.5□□□□□ -1.21
SF3A1-207ENST00000471342 SMAD5-AS1Q9Y6J3 95 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 WNK1Q9H4A3 2382 aa7.5□□□□□ -1.21
SF3A1-207ENST00000471342 TRAV30A0A087WSZ9 112 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 LINC01619G3V211 115 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 NDUFA4O00483 81 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 MPDU1O75352 247 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 JTBO76095 146 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 CSN3P07498 182 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 MYCNOSP40205 109 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 CAMLGP49069 296 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 FHITP49789 147 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 TM4SF20Q53R12 229 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 Q56UQ5 140 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 FAM209BQ5JX69 171 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 ZNF600Q6ZNG1 722 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 SLC51BQ86UW2 128 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 BAP18Q8IXM2 172 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 HSD17B11Q8NBQ5 300 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 ST8SIA2Q92186 375 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 PSMG3Q9BT73 122 aaPredicted RBP7.49□□□□□ -1.21
SF3A1-207ENST00000471342 SEPSECSQ9HD40 501 aaKnown RBP7.49□□□□□ -1.21
SF3A1-207ENST00000471342 RPRMQ9NS64 109 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 SLC39A9Q9NUM3 307 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 PXMP4Q9Y6I8 212 aa7.49□□□□□ -1.21
SF3A1-207ENST00000471342 TRAV5A0A0B4J249 113 aa7.48□□□□□ -1.21
SF3A1-207ENST00000471342 SEC14L6B5MCN3 397 aa7.48□□□□□ -1.21
SF3A1-207ENST00000471342 K7EMT4 169 aa7.48□□□□□ -1.21
SF3A1-207ENST00000471342 BUB3O43684 328 aa7.48□□□□□ -1.21
SF3A1-207ENST00000471342 GNG7O60262 68 aa7.48□□□□□ -1.21
SF3A1-207ENST00000471342 RD3LP0DJH9 198 aa7.48□□□□□ -1.21
SF3A1-207ENST00000471342 SYNJ2BPP57105 145 aa7.48□□□□□ -1.21
SF3A1-207ENST00000471342 ZNF616Q08AN1 781 aa7.48□□□□□ -1.21
SF3A1-207ENST00000471342 NSUN5P1Q3KNT7 163 aa7.48□□□□□ -1.21
SF3A1-207ENST00000471342 OR51G1Q8NGK1 321 aa7.48□□□□□ -1.21
SF3A1-207ENST00000471342 SCRT1Q9BWW7 348 aa7.48□□□□□ -1.21
SF3A1-207ENST00000471342 SLC25A32Q9H2D1 315 aa7.48□□□□□ -1.21
SF3A1-207ENST00000471342 TECRQ9NZ01 308 aaKnown RBP7.48□□□□□ -1.21
SF3A1-207ENST00000471342 SMCO3A2RU48 225 aa7.47□□□□□ -1.21
SF3A1-207ENST00000471342 C2orf70A6NJV1 201 aa7.47□□□□□ -1.21
SF3A1-207ENST00000471342 ZFP92A6NM28 416 aa7.47□□□□□ -1.21
SF3A1-207ENST00000471342 H3BRN7 92 aa7.47□□□□□ -1.21
SF3A1-207ENST00000471342 CYB5BO43169 146 aa7.47□□□□□ -1.21
SF3A1-207ENST00000471342 HNRNPCP07910 306 aaKnown RBP eCLIP7.47□□□□□ -1.21
SF3A1-207ENST00000471342 OR5G3P0C626 314 aa7.47□□□□□ -1.21
SF3A1-207ENST00000471342 SEC11BP0C7V7 166 aa7.47□□□□□ -1.21
SF3A1-207ENST00000471342 RAB2AP61019 212 aa7.47□□□□□ -1.21
SF3A1-207ENST00000471342 AKR1C1Q04828 323 aa7.47□□□□□ -1.21
SF3A1-207ENST00000471342 ZNF266Q14584 549 aa7.47□□□□□ -1.21
SF3A1-207ENST00000471342 SUN5Q8TC36 379 aa7.47□□□□□ -1.21
SF3A1-207ENST00000471342 GLMPQ8WWB7 406 aa7.47□□□□□ -1.21
SF3A1-207ENST00000471342 RNF125Q96EQ8 232 aa7.47□□□□□ -1.21
SF3A1-207ENST00000471342 UHRF2Q96PU4 802 aa7.47□□□□□ -1.21
SF3A1-207ENST00000471342 PKD1L1Q8TDX9 2849 aa7.47□□□□□ -1.21
SF3A1-207ENST00000471342 CHEK1O14757 476 aa7.46□□□□□ -1.22
SF3A1-207ENST00000471342 NUPL2O15504 423 aaKnown RBP7.46□□□□□ -1.22
SF3A1-207ENST00000471342 WIPF1O43516 503 aa7.46□□□□□ -1.22
SF3A1-207ENST00000471342 ZNF207O43670 478 aaKnown RBP7.46□□□□□ -1.22
SF3A1-207ENST00000471342 IL4P05112 153 aa7.46□□□□□ -1.22
SF3A1-207ENST00000471342 B2MP61769 119 aa7.46□□□□□ -1.22
SF3A1-207ENST00000471342 SELENOTP62341 195 aa7.46□□□□□ -1.22
SF3A1-207ENST00000471342 SERF2P84101 59 aa7.46□□□□□ -1.22
SF3A1-207ENST00000471342 FAM74A1Q5RGS3 127 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms