RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 ADTRPQ96IZ2 230 aa13.66□□□□□ -0.22
HOXB3-205ENST00000470495 F5H768 121 aa13.66□□□□□ -0.22
HOXB3-205ENST00000470495 SPATA31B1PQ5VZV4 182 aa13.66□□□□□ -0.22
HOXB3-205ENST00000470495 PRSS57Q6UWY2 283 aa13.66□□□□□ -0.22
HOXB3-205ENST00000470495 ASCL5Q7RTU5 278 aa13.66□□□□□ -0.22
HOXB3-205ENST00000470495 CD3EP07766 207 aa13.65□□□□□ -0.22
HOXB3-205ENST00000470495 RNF125Q96EQ8 232 aa13.65□□□□□ -0.22
HOXB3-205ENST00000470495 RPRMQ9NS64 109 aa13.65□□□□□ -0.22
HOXB3-205ENST00000470495 hDV102S1A0JD36 115 aa13.65□□□□□ -0.22
HOXB3-205ENST00000470495 C9orf153Q5TBE3 101 aa13.65□□□□□ -0.22
HOXB3-205ENST00000470495 NHP2Q9NX24 153 aaKnown RBP13.65□□□□□ -0.22
HOXB3-205ENST00000470495 MED13LQ71F56 2210 aa13.65□□□□□ -0.22
HOXB3-205ENST00000470495 CFAP54Q96N23 3096 aa13.65□□□□□ -0.22
HOXB3-205ENST00000470495 C11orf94C9JXX5 98 aa13.65□□□□□ -0.22
HOXB3-205ENST00000470495 CCL21O00585 134 aa13.65□□□□□ -0.22
HOXB3-205ENST00000470495 APCSP02743 223 aa13.65□□□□□ -0.22
HOXB3-205ENST00000470495 PRTN3P24158 256 aa13.65□□□□□ -0.22
HOXB3-205ENST00000470495 RPS20P60866 119 aaKnown RBP13.65□□□□□ -0.22
HOXB3-205ENST00000470495 SEC11AP67812 179 aa13.65□□□□□ -0.22
HOXB3-205ENST00000470495 SSMEM1Q8WWF3 244 aa13.65□□□□□ -0.22
HOXB3-205ENST00000470495 DUX5Q96PT3 197 aa13.65□□□□□ -0.22
HOXB3-205ENST00000470495 FBXL7Q9UJT9 491 aa13.65□□□□□ -0.22
HOXB3-205ENST00000470495 TRBV6-6A0A0A6YYG2 114 aa13.64□□□□□ -0.23
HOXB3-205ENST00000470495 MBNL2Q5VZF2 373 aaKnown RBP13.64□□□□□ -0.23
HOXB3-205ENST00000470495 GCSAMQ8N6F7 178 aa13.64□□□□□ -0.23
HOXB3-205ENST00000470495 TAF15Q92804 592 aaKnown RBP eCLIP13.64□□□□□ -0.23
HOXB3-205ENST00000470495 IGF2RP11717 2491 aa13.64□□□□□ -0.23
HOXB3-205ENST00000470495 GFRA3O60609 400 aa13.64□□□□□ -0.23
HOXB3-205ENST00000470495 TMEM50AO95807 157 aa13.64□□□□□ -0.23
HOXB3-205ENST00000470495 ERVK11-1P61568 191 aa13.64□□□□□ -0.23
HOXB3-205ENST00000470495 DKK4Q9UBT3 224 aa13.64□□□□□ -0.23
HOXB3-205ENST00000470495 FAM215AQ9Y5M1 114 aa13.64□□□□□ -0.23
HOXB3-205ENST00000470495 CRYGCP07315 174 aa13.64□□□□□ -0.23
HOXB3-205ENST00000470495 EVI2AP22794 236 aa13.64□□□□□ -0.23
HOXB3-205ENST00000470495 FOXL1Q12952 345 aa13.64□□□□□ -0.23
HOXB3-205ENST00000470495 ICAM4Q14773 271 aa13.64□□□□□ -0.23
HOXB3-205ENST00000470495 KIR3DS1Q14943 382 aa13.64□□□□□ -0.23
HOXB3-205ENST00000470495 TEX43Q6ZNM6 134 aa13.64□□□□□ -0.23
HOXB3-205ENST00000470495 SH2D6Q7Z4S9 175 aa13.64□□□□□ -0.23
HOXB3-205ENST00000470495 FAM110AQ9BQ89 295 aa13.64□□□□□ -0.23
HOXB3-205ENST00000470495 SRRM5B3KS81 715 aa13.63□□□□□ -0.23
HOXB3-205ENST00000470495 OR2J3O76001 311 aa13.63□□□□□ -0.23
HOXB3-205ENST00000470495 HLA-DRB1P01911 266 aa13.63□□□□□ -0.23
HOXB3-205ENST00000470495 NPVFQ9HCQ7 196 aa13.63□□□□□ -0.23
HOXB3-205ENST00000470495 JPT1Q9UK76 154 aa13.63□□□□□ -0.23
HOXB3-205ENST00000470495 TIMP3P35625 211 aa13.63□□□□□ -0.23
HOXB3-205ENST00000470495 GNB1P62873 340 aa13.63□□□□□ -0.23
HOXB3-205ENST00000470495 PRR30Q53SZ7 412 aaPredicted RBP13.63□□□□□ -0.23
HOXB3-205ENST00000470495 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.63□□□□□ -0.23
HOXB3-205ENST00000470495 LINC01560Q8TB33 94 aa13.63□□□□□ -0.23
HOXB3-205ENST00000470495 SNRNP40Q96DI7 357 aaKnown RBP13.63□□□□□ -0.23
HOXB3-205ENST00000470495 SMIM17P0DL12 118 aa13.63□□□□□ -0.23
HOXB3-205ENST00000470495 SRSF9Q13242 221 aaKnown RBP eCLIP13.63□□□□□ -0.23
HOXB3-205ENST00000470495 IGFL2Q6UWQ7 119 aa13.63□□□□□ -0.23
HOXB3-205ENST00000470495 LSM4Q9Y4Z0 139 aaKnown RBP13.63□□□□□ -0.23
HOXB3-205ENST00000470495 TLN1Q9Y490 2541 aaKnown RBP13.62□□□□□ -0.23
HOXB3-205ENST00000470495 PPIFP30405 207 aaKnown RBP13.62□□□□□ -0.23
HOXB3-205ENST00000470495 ABHD12Q8N2K0 398 aa13.62□□□□□ -0.23
HOXB3-205ENST00000470495 KCNS1Q96KK3 526 aa13.62□□□□□ -0.23
HOXB3-205ENST00000470495 USF3Q68DE3 2245 aa13.62□□□□□ -0.23
HOXB3-205ENST00000470495 IGLC7A0M8Q6 106 aa13.62□□□□□ -0.23
HOXB3-205ENST00000470495 LINC00869P0C866 280 aa13.62□□□□□ -0.23
HOXB3-205ENST00000470495 IGKV1D-17A0A075B6S4 117 aa13.62□□□□□ -0.23
HOXB3-205ENST00000470495 K7EP34 96 aa13.62□□□□□ -0.23
HOXB3-205ENST00000470495 IGHV1-46P01743 117 aa13.62□□□□□ -0.23
HOXB3-205ENST00000470495 COX7A1P24310 79 aa13.62□□□□□ -0.23
HOXB3-205ENST00000470495 PSMB2P49721 201 aa13.62□□□□□ -0.23
HOXB3-205ENST00000470495 A0A0G2JNJ9 132 aa13.61□□□□□ -0.23
HOXB3-205ENST00000470495 ZNF585BQ52M93 769 aa13.61□□□□□ -0.23
HOXB3-205ENST00000470495 ARPC1AQ92747 370 aa13.61□□□□□ -0.23
HOXB3-205ENST00000470495 Q9UFV3 132 aa13.61□□□□□ -0.23
HOXB3-205ENST00000470495 ATP5LO75964 103 aa13.61□□□□□ -0.23
HOXB3-205ENST00000470495 IGF2-ASQ6U949 168 aa13.61□□□□□ -0.23
HOXB3-205ENST00000470495 NDUFB4O95168 129 aa13.61□□□□□ -0.23
HOXB3-205ENST00000470495 MORN2Q502X0 79 aa13.61□□□□□ -0.23
HOXB3-205ENST00000470495 IGLC1P0CG04 106 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 TCTEX1D4Q5JR98 221 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 FAM90A26D6RGX4 464 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 ZNF324O75467 553 aaPredicted RBP13.6□□□□□ -0.23
HOXB3-205ENST00000470495 KIR2DS2P43631 304 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 ZNF525Q8N782 197 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 OR51G1Q8NGK1 321 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 K7N7A8 449 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 KBTBD11O94819 623 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 FAM90A1Q86YD7 464 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 IGHV3-72A0A0B4J1Y9 119 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 LINC00473A8K010 186 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 IGKV1-39P01597 117 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 IGKV1D-39P04432 117 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 APELAP0DMC3 54 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 SERF2P84101 59 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 MOB3BQ86TA1 216 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 IDI2-AS1Q9NZ38 188 aa13.6□□□□□ -0.23
HOXB3-205ENST00000470495 IGFL3Q6UXB1 125 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 PRSS3P2Q8NHM4 247 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 SLC25A33Q9BSK2 321 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 CISD1Q9NZ45 108 aaKnown RBP13.59□□□□□ -0.23
HOXB3-205ENST00000470495 IGHV2-26A0A0B4J1V2 119 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 RHOBP62745 196 aa13.59□□□□□ -0.23
HOXB3-205ENST00000470495 ERHP84090 104 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms