RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 NPIPB3Q92617 1050 aa12.76□□□□□ -0.37
TTC28-205ENST00000469670 RRNAD1Q96FB5 475 aaKnown RBP12.76□□□□□ -0.37
TTC28-205ENST00000469670 TMEM208Q9BTX3 173 aa12.76□□□□□ -0.37
TTC28-205ENST00000469670 LYRM9A8MSI8 78 aa12.75□□□□□ -0.37
TTC28-205ENST00000469670 M0QYG6 137 aa12.75□□□□□ -0.37
TTC28-205ENST00000469670 SOCS3O14543 225 aa12.75□□□□□ -0.37
TTC28-205ENST00000469670 NXPH3O95157 252 aa12.75□□□□□ -0.37
TTC28-205ENST00000469670 DEFB130BP0DP73 79 aa12.75□□□□□ -0.37
TTC28-205ENST00000469670 DEFB130AP0DP74 79 aa12.75□□□□□ -0.37
TTC28-205ENST00000469670 PSG1P11464 419 aa12.75□□□□□ -0.37
TTC28-205ENST00000469670 NUP62P37198 522 aaPredicted RBP12.75□□□□□ -0.37
TTC28-205ENST00000469670 PIGPP57054 158 aa12.75□□□□□ -0.37
TTC28-205ENST00000469670 C2orf83Q53S99 150 aa12.75□□□□□ -0.37
TTC28-205ENST00000469670 IZUMO2Q6UXV1 221 aa12.75□□□□□ -0.37
TTC28-205ENST00000469670 ZNF486Q96H40 463 aaPredicted RBP12.75□□□□□ -0.37
TTC28-205ENST00000469670 HEYLQ9NQ87 328 aaPredicted RBP12.75□□□□□ -0.37
TTC28-205ENST00000469670 A0A0J9YX75 114 aa12.74□□□□□ -0.37
TTC28-205ENST00000469670 C3orf85A0A1B0GTC6 90 aa12.74□□□□□ -0.37
TTC28-205ENST00000469670 RCVRNP35243 200 aa12.74□□□□□ -0.37
TTC28-205ENST00000469670 ETFRF1Q6IPR1 90 aa12.74□□□□□ -0.37
TTC28-205ENST00000469670 RNASE11Q8TAA1 199 aaKnown RBP12.74□□□□□ -0.37
TTC28-205ENST00000469670 RNF125Q96EQ8 232 aa12.74□□□□□ -0.37
TTC28-205ENST00000469670 ACY3Q96HD9 319 aa12.74□□□□□ -0.37
TTC28-205ENST00000469670 IGF2BP2-AS1Q96M15 143 aa12.74□□□□□ -0.37
TTC28-205ENST00000469670 Q9H8V8 135 aa12.74□□□□□ -0.37
TTC28-205ENST00000469670 PFDN2Q9UHV9 154 aa12.74□□□□□ -0.37
TTC28-205ENST00000469670 ANKRD65E5RJM6 399 aa12.73□□□□□ -0.37
TTC28-205ENST00000469670 PRM2P04554 102 aa12.73□□□□□ -0.37
TTC28-205ENST00000469670 BTF3P20290 206 aaKnown RBP12.73□□□□□ -0.37
TTC28-205ENST00000469670 SP6Q3SY56 376 aa12.73□□□□□ -0.37
TTC28-205ENST00000469670 AARDQ4LEZ3 155 aa12.73□□□□□ -0.37
TTC28-205ENST00000469670 SSX7Q7RTT5 188 aa12.73□□□□□ -0.37
TTC28-205ENST00000469670 CROCCP3Q8IVE0 287 aa12.73□□□□□ -0.37
TTC28-205ENST00000469670 SLC24A4Q8NFF2 622 aa12.73□□□□□ -0.37
TTC28-205ENST00000469670 OR52E5Q8NH55 327 aa12.73□□□□□ -0.37
TTC28-205ENST00000469670 GPR146Q96CH1 333 aa12.73□□□□□ -0.37
TTC28-205ENST00000469670 PBDC1Q9BVG4 233 aa12.73□□□□□ -0.37
TTC28-205ENST00000469670 KRTAP1-5Q9BYS1 174 aa12.73□□□□□ -0.37
TTC28-205ENST00000469670 VCX3BQ9H321 246 aa12.73□□□□□ -0.37
TTC28-205ENST00000469670 ZNF705GA8MUZ8 300 aaPredicted RBP12.72□□□□□ -0.37
TTC28-205ENST00000469670 CLINT1Q14677 625 aa12.72□□□□□ -0.37
TTC28-205ENST00000469670 TTC32Q5I0X7 151 aa12.72□□□□□ -0.37
TTC28-205ENST00000469670 OR8G2PQ6IF36 304 aa12.72□□□□□ -0.37
TTC28-205ENST00000469670 RNF141Q8WVD5 230 aa12.72□□□□□ -0.37
TTC28-205ENST00000469670 TMEM170AQ8WVE7 144 aa12.72□□□□□ -0.37
TTC28-205ENST00000469670 ISLRO14498 428 aa12.71□□□□□ -0.37
TTC28-205ENST00000469670 ATP5G1P05496 136 aa12.71□□□□□ -0.37
TTC28-205ENST00000469670 ATP5G3P48201 142 aa12.71□□□□□ -0.37
TTC28-205ENST00000469670 ABHD1Q96SE0 405 aa12.71□□□□□ -0.37
TTC28-205ENST00000469670 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.71□□□□□ -0.37
TTC28-205ENST00000469670 DOK5Q9P104 306 aa12.71□□□□□ -0.37
TTC28-205ENST00000469670 UCP1P25874 307 aa12.7□□□□□ -0.38
TTC28-205ENST00000469670 SUPT4H1P63272 117 aaKnown RBP12.7□□□□□ -0.38
TTC28-205ENST00000469670 FCN2Q15485 313 aa12.7□□□□□ -0.38
TTC28-205ENST00000469670 AMTNQ6UX39 209 aa12.7□□□□□ -0.38
TTC28-205ENST00000469670 LHFPL1Q86WI0 220 aa12.7□□□□□ -0.38
TTC28-205ENST00000469670 OR4C16Q8NGL9 310 aa12.7□□□□□ -0.38
TTC28-205ENST00000469670 RPRMQ9NS64 109 aa12.7□□□□□ -0.38
TTC28-205ENST00000469670 COPZ2Q9P299 210 aa12.7□□□□□ -0.38
TTC28-205ENST00000469670 RAB26Q9ULW5 256 aa12.7□□□□□ -0.38
TTC28-205ENST00000469670 FAT1Q14517 4588 aa12.69□□□□□ -0.38
TTC28-205ENST00000469670 CEBPZOSA8MTT3 80 aa12.69□□□□□ -0.38
TTC28-205ENST00000469670 A8MTW9 85 aa12.69□□□□□ -0.38
TTC28-205ENST00000469670 TGFBR1P36897 503 aa12.69□□□□□ -0.38
TTC28-205ENST00000469670 DLK1P80370 383 aa12.69□□□□□ -0.38
TTC28-205ENST00000469670 C1orf194Q5T5A4 169 aa12.69□□□□□ -0.38
TTC28-205ENST00000469670 SNX29P2Q8IUI4 249 aa12.69□□□□□ -0.38
TTC28-205ENST00000469670 FAM219AQ8IW50 185 aa12.69□□□□□ -0.38
TTC28-205ENST00000469670 C20orf173Q96LM9 149 aa12.69□□□□□ -0.38
TTC28-205ENST00000469670 Q9H3A6 140 aa12.69□□□□□ -0.38
TTC28-205ENST00000469670 CBY3A6NI87 242 aa12.68□□□□□ -0.38
TTC28-205ENST00000469670 INSP01308 110 aa12.68□□□□□ -0.38
TTC28-205ENST00000469670 ELK1P19419 428 aa12.68□□□□□ -0.38
TTC28-205ENST00000469670 TSPOP30536 169 aa12.68□□□□□ -0.38
TTC28-205ENST00000469670 RPS19P39019 145 aaKnown RBP12.68□□□□□ -0.38
TTC28-205ENST00000469670 NOXA1Q86UR1 476 aa12.68□□□□□ -0.38
TTC28-205ENST00000469670 LYPD1Q8N2G4 141 aa12.68□□□□□ -0.38
TTC28-205ENST00000469670 CCDC71LQ8N9Z2 235 aa12.68□□□□□ -0.38
TTC28-205ENST00000469670 MYCBP2O75592 4640 aa12.67□□□□□ -0.38
TTC28-205ENST00000469670 SMIM31A0A1B0GVY4 71 aa12.67□□□□□ -0.38
TTC28-205ENST00000469670 PLAC8L1A1L4L8 177 aa12.67□□□□□ -0.38
TTC28-205ENST00000469670 CRXO43186 299 aaPredicted RBP12.67□□□□□ -0.38
TTC28-205ENST00000469670 KLF9Q13886 244 aaPredicted RBP12.67□□□□□ -0.38
TTC28-205ENST00000469670 SPINK13Q1W4C9 94 aa12.67□□□□□ -0.38
TTC28-205ENST00000469670 Q5VSD8 79 aa12.67□□□□□ -0.38
TTC28-205ENST00000469670 SAMD13Q5VXD3 122 aa12.67□□□□□ -0.38
TTC28-205ENST00000469670 C16orf92Q96LL3 132 aa12.67□□□□□ -0.38
TTC28-205ENST00000469670 CACNG5Q9UF02 275 aa12.67□□□□□ -0.38
TTC28-205ENST00000469670 M0R2Z0 102 aa12.66□□□□□ -0.38
TTC28-205ENST00000469670 B3GALNT1O75752 331 aa12.66□□□□□ -0.38
TTC28-205ENST00000469670 AZU1P20160 251 aa12.66□□□□□ -0.38
TTC28-205ENST00000469670 LYZP61626 148 aa12.66□□□□□ -0.38
TTC28-205ENST00000469670 B2MP61769 119 aa12.66□□□□□ -0.38
TTC28-205ENST00000469670 ZNF90Q03938 601 aa12.66□□□□□ -0.38
TTC28-205ENST00000469670 RNASE10Q5GAN6 216 aaKnown RBP12.66□□□□□ -0.38
TTC28-205ENST00000469670 NMSQ5H8A3 153 aa12.66□□□□□ -0.38
TTC28-205ENST00000469670 OR8I2Q8N0Y5 310 aa12.66□□□□□ -0.38
TTC28-205ENST00000469670 ZFAND1Q8TCF1 268 aa12.66□□□□□ -0.38
TTC28-205ENST00000469670 PPP1R14BQ96C90 147 aa12.66□□□□□ -0.38
TTC28-205ENST00000469670 UHRF2Q96PU4 802 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms