RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 MIC13Q5XKP0 118 aa13.53□□□□□ -0.24
RPL39-202ENST00000468844 ZNF343Q6P1L6 599 aa13.53□□□□□ -0.24
RPL39-202ENST00000468844 UBE2E2Q96LR5 201 aa13.53□□□□□ -0.24
RPL39-202ENST00000468844 GNB4Q9HAV0 340 aa13.53□□□□□ -0.24
RPL39-202ENST00000468844 SLC45A2Q9UMX9 530 aa13.53□□□□□ -0.24
RPL39-202ENST00000468844 TIMM9Q9Y5J7 89 aa13.53□□□□□ -0.24
RPL39-202ENST00000468844 PPP5D1E7EU14 171 aa13.52□□□□□ -0.24
RPL39-202ENST00000468844 C17orf112F2Z3M2 114 aa13.52□□□□□ -0.24
RPL39-202ENST00000468844 SEC11BP0C7V7 166 aa13.52□□□□□ -0.24
RPL39-202ENST00000468844 STPG3Q8N7X2 389 aa13.52□□□□□ -0.24
RPL39-202ENST00000468844 C11orf44Q8N8P7 122 aa13.52□□□□□ -0.24
RPL39-202ENST00000468844 ZNF709Q8N972 641 aa13.52□□□□□ -0.24
RPL39-202ENST00000468844 SAT2Q96F10 170 aaPredicted RBP13.52□□□□□ -0.24
RPL39-202ENST00000468844 OR5B12Q96R08 314 aa13.52□□□□□ -0.24
RPL39-202ENST00000468844 ATP6V0BQ99437 205 aa13.52□□□□□ -0.24
RPL39-202ENST00000468844 PLA2G2EQ9NZK7 142 aa13.52□□□□□ -0.24
RPL39-202ENST00000468844 TRAV30A0A087WSZ9 112 aa13.52□□□□□ -0.25
RPL39-202ENST00000468844 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.52□□□□□ -0.25
RPL39-202ENST00000468844 ZNF705EA8MWA4 302 aaPredicted RBP13.52□□□□□ -0.25
RPL39-202ENST00000468844 TGOLN2O43493 480 aa13.52□□□□□ -0.25
RPL39-202ENST00000468844 RPL29P47914 159 aaKnown RBP13.52□□□□□ -0.25
RPL39-202ENST00000468844 PRR20EP86478 221 aa13.52□□□□□ -0.25
RPL39-202ENST00000468844 PRR20CP86479 221 aa13.52□□□□□ -0.25
RPL39-202ENST00000468844 PRR20DP86480 221 aa13.52□□□□□ -0.25
RPL39-202ENST00000468844 PRR20BP86481 221 aa13.52□□□□□ -0.25
RPL39-202ENST00000468844 PRR20AP86496 221 aa13.52□□□□□ -0.25
RPL39-202ENST00000468844 EIF5AL1Q6IS14 154 aaKnown RBP13.52□□□□□ -0.25
RPL39-202ENST00000468844 IL34Q6ZMJ4 242 aa13.52□□□□□ -0.25
RPL39-202ENST00000468844 CYP2G1PQ6ZSU1 146 aa13.52□□□□□ -0.25
RPL39-202ENST00000468844 OR2G3Q8NGZ4 309 aa13.52□□□□□ -0.25
RPL39-202ENST00000468844 PXMP4Q9Y6I8 212 aa13.52□□□□□ -0.25
RPL39-202ENST00000468844 CD28P10747 220 aa13.51□□□□□ -0.25
RPL39-202ENST00000468844 C10orf91Q5T1B1 145 aa13.51□□□□□ -0.25
RPL39-202ENST00000468844 ZNF414Q96IQ9 312 aa13.51□□□□□ -0.25
RPL39-202ENST00000468844 GAR1Q9NY12 217 aaKnown RBP13.51□□□□□ -0.25
RPL39-202ENST00000468844 LINC00869P0C866 280 aa13.51□□□□□ -0.25
RPL39-202ENST00000468844 PSG1P11464 419 aa13.51□□□□□ -0.25
RPL39-202ENST00000468844 ADCYAP1P18509 176 aa13.51□□□□□ -0.25
RPL39-202ENST00000468844 B2MP61769 119 aa13.51□□□□□ -0.25
RPL39-202ENST00000468844 C18orf65Q6ZTR6 163 aa13.51□□□□□ -0.25
RPL39-202ENST00000468844 VSIRQ9H7M9 311 aa13.51□□□□□ -0.25
RPL39-202ENST00000468844 A0A1B0GUS0 222 aa13.5□□□□□ -0.25
RPL39-202ENST00000468844 FAM74A7A6NL05 159 aa13.5□□□□□ -0.25
RPL39-202ENST00000468844 CDX1P47902 265 aaPredicted RBP13.5□□□□□ -0.25
RPL39-202ENST00000468844 ELLP55199 621 aaPredicted RBP13.5□□□□□ -0.25
RPL39-202ENST00000468844 SELENOTP62341 195 aa13.5□□□□□ -0.25
RPL39-202ENST00000468844 SERF2P84101 59 aa13.5□□□□□ -0.25
RPL39-202ENST00000468844 SRSF3P84103 164 aaKnown RBP13.5□□□□□ -0.25
RPL39-202ENST00000468844 FAM74A3Q4VXF1 159 aa13.5□□□□□ -0.25
RPL39-202ENST00000468844 SVBPQ8N300 66 aa13.5□□□□□ -0.25
RPL39-202ENST00000468844 IGHV3-35A0A0C4DH35 117 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 YIF1AO95070 293 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 LGALS1P09382 135 aaKnown RBP13.49□□□□□ -0.25
RPL39-202ENST00000468844 ARL3P36405 182 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 YPEL3P61236 119 aaPredicted RBP13.49□□□□□ -0.25
RPL39-202ENST00000468844 ZNF616Q08AN1 781 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 KRTAP24-1Q3LI83 254 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 GCSAMLQ5JQS6 135 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 KHDC1LQ5JSQ8 128 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 FFAR4Q5NUL3 377 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 FAM122CQ6P4D5 195 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 KCNIP2Q9NS61 270 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 SLC39A9Q9NUM3 307 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 CARHSP1Q9Y2V2 147 aaKnown RBP13.49□□□□□ -0.25
RPL39-202ENST00000468844 TSPAN15O95858 294 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 TOMM40O96008 361 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 SULT1A2P50226 295 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 KRTAP10-3P60369 221 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 FOXL1Q12952 345 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 SPSB3Q6PJ21 355 aa13.49□□□□□ -0.25
RPL39-202ENST00000468844 CITED2Q99967 270 aaPredicted RBP13.49□□□□□ -0.25
RPL39-202ENST00000468844 PEF1Q9UBV8 284 aaKnown RBP13.49□□□□□ -0.25
RPL39-202ENST00000468844 ANK2Q01484 3957 aa13.48□□□□□ -0.25
RPL39-202ENST00000468844 F8W036 122 aa13.48□□□□□ -0.25
RPL39-202ENST00000468844 BMPR1BO00238 502 aa13.48□□□□□ -0.25
RPL39-202ENST00000468844 SCGB2A1O75556 95 aa13.48□□□□□ -0.25
RPL39-202ENST00000468844 RD3LP0DJH9 198 aa13.48□□□□□ -0.25
RPL39-202ENST00000468844 BLOC1S1P78537 153 aa13.48□□□□□ -0.25
RPL39-202ENST00000468844 GUCA2BQ16661 112 aa13.48□□□□□ -0.25
RPL39-202ENST00000468844 CLRN3Q8NCR9 226 aa13.48□□□□□ -0.25
RPL39-202ENST00000468844 HRH4Q9H3N8 390 aa13.48□□□□□ -0.25
RPL39-202ENST00000468844 OR51G1Q8NGK1 321 aa13.47□□□□□ -0.25
RPL39-202ENST00000468844 SEC11CQ9BY50 192 aa13.47□□□□□ -0.25
RPL39-202ENST00000468844 TREM1Q9NP99 234 aa13.47□□□□□ -0.25
RPL39-202ENST00000468844 PUS1Q9Y606 427 aaKnown RBP eCLIP13.47□□□□□ -0.25
RPL39-202ENST00000468844 FHITP49789 147 aa13.47□□□□□ -0.25
RPL39-202ENST00000468844 RAB2AP61019 212 aa13.47□□□□□ -0.25
RPL39-202ENST00000468844 DEFB136Q30KP8 78 aa13.47□□□□□ -0.25
RPL39-202ENST00000468844 FAM209BQ5JX69 171 aa13.47□□□□□ -0.25
RPL39-202ENST00000468844 Q6ZRG5 221 aa13.47□□□□□ -0.25
RPL39-202ENST00000468844 C4orf3Q8WVX3 66 aa13.47□□□□□ -0.25
RPL39-202ENST00000468844 WFDC12Q8WWY7 111 aa13.47□□□□□ -0.25
RPL39-202ENST00000468844 RPRMQ9NS64 109 aa13.47□□□□□ -0.25
RPL39-202ENST00000468844 OR2C1O95371 312 aa13.46□□□□□ -0.25
RPL39-202ENST00000468844 IL4P05112 153 aa13.46□□□□□ -0.25
RPL39-202ENST00000468844 FABP1P07148 127 aa13.46□□□□□ -0.25
RPL39-202ENST00000468844 AKR1C8PQ5T2L2 129 aa13.46□□□□□ -0.25
RPL39-202ENST00000468844 ZNF600Q6ZNG1 722 aa13.46□□□□□ -0.25
RPL39-202ENST00000468844 KLHL30-AS1Q8NEE0 82 aa13.46□□□□□ -0.25
RPL39-202ENST00000468844 TMEM37Q8WXS4 190 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms