RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 TMEM41BQ5BJD5 291 aa15.87■□□□□ 0.13
TTC28-204ENST00000468807 SIGLEC15Q6ZMC9 328 aa15.87■□□□□ 0.13
TTC28-204ENST00000468807 TRIM63Q969Q1 353 aa15.87■□□□□ 0.13
TTC28-204ENST00000468807 SLC35E1Q96K37 410 aa15.87■□□□□ 0.13
TTC28-204ENST00000468807 CLEC5AQ9NY25 188 aa15.87■□□□□ 0.13
TTC28-204ENST00000468807 PIGBOS1A0A0B4J2F0 54 aa15.86■□□□□ 0.13
TTC28-204ENST00000468807 GIG44P09565 113 aaPredicted RBP15.86■□□□□ 0.13
TTC28-204ENST00000468807 IAPPP10997 89 aa15.86■□□□□ 0.13
TTC28-204ENST00000468807 S100A5P33763 92 aa15.86■□□□□ 0.13
TTC28-204ENST00000468807 SNRPD3P62318 126 aaKnown RBP15.86■□□□□ 0.13
TTC28-204ENST00000468807 RNF125Q96EQ8 232 aa15.86■□□□□ 0.13
TTC28-204ENST00000468807 RAB40CQ96S21 281 aa15.86■□□□□ 0.13
TTC28-204ENST00000468807 NRN1Q9NPD7 142 aa15.86■□□□□ 0.13
TTC28-204ENST00000468807 FRAS1Q86XX4 4008 aa15.85■□□□□ 0.13
TTC28-204ENST00000468807 FAM90A26D6RGX4 464 aa15.85■□□□□ 0.13
TTC28-204ENST00000468807 BUB3O43684 328 aa15.85■□□□□ 0.13
TTC28-204ENST00000468807 TMEM128Q5BJH2 165 aa15.85■□□□□ 0.13
TTC28-204ENST00000468807 V9GYH0 126 aa15.85■□□□□ 0.13
TTC28-204ENST00000468807 IGHV4-28A0A0C4DH34 117 aa15.84■□□□□ 0.13
TTC28-204ENST00000468807 DUXBA0A1W2PPF3 345 aa15.84■□□□□ 0.13
TTC28-204ENST00000468807 GAMTQ14353 236 aa15.84■□□□□ 0.13
TTC28-204ENST00000468807 Q8NAQ8 132 aa15.84■□□□□ 0.13
TTC28-204ENST00000468807 GPX4P36969 197 aaPredicted RBP15.83■□□□□ 0.12
TTC28-204ENST00000468807 ATP5IP56385 69 aaPredicted RBP15.83■□□□□ 0.12
TTC28-204ENST00000468807 RAB11AP62491 216 aa15.83■□□□□ 0.12
TTC28-204ENST00000468807 ZNF90Q03938 601 aa15.83■□□□□ 0.12
TTC28-204ENST00000468807 C2CD4CQ8TF44 421 aa15.83■□□□□ 0.12
TTC28-204ENST00000468807 PFDN2Q9UHV9 154 aa15.83■□□□□ 0.12
TTC28-204ENST00000468807 RBMY1A1P0DJD3 496 aaKnown RBP15.82■□□□□ 0.12
TTC28-204ENST00000468807 RBMY1CP0DJD4 496 aa15.82■□□□□ 0.12
TTC28-204ENST00000468807 MIFP14174 115 aa15.82■□□□□ 0.12
TTC28-204ENST00000468807 NUP62P37198 522 aaPredicted RBP15.82■□□□□ 0.12
TTC28-204ENST00000468807 LYZP61626 148 aa15.82■□□□□ 0.12
TTC28-204ENST00000468807 RBMY1FQ15415 496 aaKnown RBP15.82■□□□□ 0.12
TTC28-204ENST00000468807 ZNF79Q15937 498 aa15.82■□□□□ 0.12
TTC28-204ENST00000468807 RPP25LQ8N5L8 163 aaKnown RBP15.82■□□□□ 0.12
TTC28-204ENST00000468807 SLC25A21Q9BQT8 299 aaPredicted RBP15.82■□□□□ 0.12
TTC28-204ENST00000468807 TBC1D24Q9ULP9 559 aa15.82■□□□□ 0.12
TTC28-204ENST00000468807 VPS13DQ5THJ4 4388 aa15.82■□□□□ 0.12
TTC28-204ENST00000468807 PITX3O75364 302 aa15.81■□□□□ 0.12
TTC28-204ENST00000468807 DEDDO75618 318 aa15.81■□□□□ 0.12
TTC28-204ENST00000468807 FABP1P07148 127 aa15.81■□□□□ 0.12
TTC28-204ENST00000468807 PPP1R1AQ13522 171 aa15.81■□□□□ 0.12
TTC28-204ENST00000468807 OR2F1Q13607 317 aa15.81■□□□□ 0.12
TTC28-204ENST00000468807 CENPSQ8N2Z9 138 aa15.81■□□□□ 0.12
TTC28-204ENST00000468807 PPP1R14BQ96C90 147 aa15.81■□□□□ 0.12
TTC28-204ENST00000468807 MAGT1Q9H0U3 335 aa15.81■□□□□ 0.12
TTC28-204ENST00000468807 IGKV1D-37A0A075B6S9 117 aa15.8■□□□□ 0.12
TTC28-204ENST00000468807 MED6O75586 246 aa15.8■□□□□ 0.12
TTC28-204ENST00000468807 SFT2D2O95562 160 aa15.8■□□□□ 0.12
TTC28-204ENST00000468807 HOXB5P09067 269 aa15.8■□□□□ 0.12
TTC28-204ENST00000468807 NUTF2P61970 127 aaKnown RBP15.8■□□□□ 0.12
TTC28-204ENST00000468807 LGALS9CQ6DKI2 356 aa15.8■□□□□ 0.12
TTC28-204ENST00000468807 OR8G2PQ6IF36 304 aa15.8■□□□□ 0.12
TTC28-204ENST00000468807 LRTM2Q8N967 370 aa15.8■□□□□ 0.12
TTC28-204ENST00000468807 LINC00052Q96N35 136 aa15.8■□□□□ 0.12
TTC28-204ENST00000468807 X6R8D5 127 aa15.8■□□□□ 0.12
TTC28-204ENST00000468807 DNAH10Q8IVF4 4471 aa15.8■□□□□ 0.12
TTC28-204ENST00000468807 ZNF705EA8MWA4 302 aaPredicted RBP15.79■□□□□ 0.12
TTC28-204ENST00000468807 IGLL5B9A064 214 aa15.79■□□□□ 0.12
TTC28-204ENST00000468807 INPP1P49441 399 aa15.79■□□□□ 0.12
TTC28-204ENST00000468807 SEPSECSQ9HD40 501 aaKnown RBP15.79■□□□□ 0.12
TTC28-204ENST00000468807 XCL2Q9UBD3 114 aa15.79■□□□□ 0.12
TTC28-204ENST00000468807 TMED3Q9Y3Q3 217 aa15.79■□□□□ 0.12
TTC28-204ENST00000468807 SNRPGP15A8MWD9 76 aa15.78■□□□□ 0.12
TTC28-204ENST00000468807 WRBO00258 174 aa15.78■□□□□ 0.12
TTC28-204ENST00000468807 IGKV3-20P01619 116 aa15.78■□□□□ 0.12
TTC28-204ENST00000468807 RPP30P78346 268 aaKnown RBP15.78■□□□□ 0.12
TTC28-204ENST00000468807 SPANXN2Q5MJ10 180 aa15.78■□□□□ 0.12
TTC28-204ENST00000468807 CCDC190Q86UF4 302 aa15.78■□□□□ 0.12
TTC28-204ENST00000468807 CSNK1G2-AS1Q8NCQ2 148 aa15.78■□□□□ 0.12
TTC28-204ENST00000468807 CIB3Q96Q77 187 aaPredicted RBP15.78■□□□□ 0.12
TTC28-204ENST00000468807 C1QTNF4Q9BXJ3 329 aa15.78■□□□□ 0.12
TTC28-204ENST00000468807 HRH4Q9H3N8 390 aa15.78■□□□□ 0.12
TTC28-204ENST00000468807 C11orf94C9JXX5 98 aa15.77■□□□□ 0.12
TTC28-204ENST00000468807 H3BMM0 161 aa15.77■□□□□ 0.12
TTC28-204ENST00000468807 SLC25A6P12236 298 aa15.77■□□□□ 0.12
TTC28-204ENST00000468807 HLA-DMBP28068 263 aa15.77■□□□□ 0.12
TTC28-204ENST00000468807 COQ8AQ8NI60 647 aa15.77■□□□□ 0.12
TTC28-204ENST00000468807 DEDD2Q8WXF8 326 aa15.77■□□□□ 0.12
TTC28-204ENST00000468807 ELOA3CA0A087WX78 387 aaPredicted RBP15.76■□□□□ 0.11
TTC28-204ENST00000468807 SYNGR2O43760 224 aa15.76■□□□□ 0.11
TTC28-204ENST00000468807 ID1P41134 155 aa15.76■□□□□ 0.11
TTC28-204ENST00000468807 NKX2-1P43699 371 aaPredicted RBP15.76■□□□□ 0.11
TTC28-204ENST00000468807 DEFB1P60022 68 aa15.76■□□□□ 0.11
TTC28-204ENST00000468807 SPANXN5Q5MJ07 72 aa15.76■□□□□ 0.11
TTC28-204ENST00000468807 GSG1LQ6UXU4 331 aa15.76■□□□□ 0.11
TTC28-204ENST00000468807 Q6ZTC4 211 aa15.76■□□□□ 0.11
TTC28-204ENST00000468807 OR8I2Q8N0Y5 310 aa15.76■□□□□ 0.11
TTC28-204ENST00000468807 TRGV9Q99603 122 aa15.76■□□□□ 0.11
TTC28-204ENST00000468807 WDR12Q9GZL7 423 aaKnown RBP15.76■□□□□ 0.11
TTC28-204ENST00000468807 H3BP45 60 aa15.75■□□□□ 0.11
TTC28-204ENST00000468807 HLA-DRB4P13762 266 aa15.75■□□□□ 0.11
TTC28-204ENST00000468807 GDF5OSQ5U4N7 250 aa15.75■□□□□ 0.11
TTC28-204ENST00000468807 GGNBP1Q5YKI7 109 aa15.75■□□□□ 0.11
TTC28-204ENST00000468807 HLA-DRB4X5D2U9 266 aa15.75■□□□□ 0.11
TTC28-204ENST00000468807 DNAH6Q9C0G6 4158 aa15.74■□□□□ 0.11
TTC28-204ENST00000468807 IGKV1OR2-108A0A075B7D4 117 aa15.74■□□□□ 0.11
TTC28-204ENST00000468807 LINC00854A0A1B0GVQ3 168 aa15.74■□□□□ 0.11
TTC28-204ENST00000468807 FXYD7P58549 80 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms