RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 YPEL3P61236 119 aaPredicted RBP9.32□□□□□ -0.92
CTNS-205ENST00000467663 PRR20EP86478 221 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 PRR20CP86479 221 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 PRR20DP86480 221 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 PRR20BP86481 221 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 PRR20AP86496 221 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 RUNX1Q01196 453 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 TMEM41BQ5BJD5 291 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 SPSB3Q6PJ21 355 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 EEF1AKMT3Q96AZ1 226 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 ACY3Q96HD9 319 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 MGST2Q99735 147 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 RSG1Q9BU20 258 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 ZNF355PQ9NSJ1 428 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 MED9Q9NWA0 146 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 SLC45A2Q9UMX9 530 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 RNF24Q9Y225 148 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 DMRT1Q9Y5R6 373 aa9.32□□□□□ -0.92
CTNS-205ENST00000467663 GNG7O60262 68 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 HBE1P02100 147 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 PRH1P02810 166 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 OR10J1P30954 320 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 B2MP61769 119 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 RHOGP84095 191 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 ATP5G2Q06055 141 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 EGFEM1PQ0D2K5 195 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 MLANAQ16655 118 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 FFAR4Q5NUL3 377 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 TMEM182Q6ZP80 229 aaPredicted RBP9.31□□□□□ -0.92
CTNS-205ENST00000467663 CYP2G1PQ6ZSU1 146 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 BPIFCQ8NFQ6 507 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 GATAD1Q8WUU5 269 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 PFDN5Q99471 154 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 MCRIP2Q9BUT9 160 aaKnown RBP9.31□□□□□ -0.92
CTNS-205ENST00000467663 GPR61Q9BZJ8 451 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 SH3BGRL3Q9H299 93 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 SLC39A9Q9NUM3 307 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 PXMP4Q9Y6I8 212 aa9.31□□□□□ -0.92
CTNS-205ENST00000467663 ELOA3CA0A087WX78 387 aaPredicted RBP9.3□□□□□ -0.92
CTNS-205ENST00000467663 ZNF705EA8MWA4 302 aaPredicted RBP9.3□□□□□ -0.92
CTNS-205ENST00000467663 CCL24O00175 119 aa9.3□□□□□ -0.92
CTNS-205ENST00000467663 OR2J3O76001 311 aa9.3□□□□□ -0.92
CTNS-205ENST00000467663 NDUFB8O95169 186 aa9.3□□□□□ -0.92
CTNS-205ENST00000467663 TRGV3P03979 118 aa9.3□□□□□ -0.92
CTNS-205ENST00000467663 NMBP08949 121 aa9.3□□□□□ -0.92
CTNS-205ENST00000467663 IGLC1P0CG04 106 aa9.3□□□□□ -0.92
CTNS-205ENST00000467663 PSMB8P28062 276 aa9.3□□□□□ -0.92
CTNS-205ENST00000467663 PLP1P60201 277 aa9.3□□□□□ -0.92
CTNS-205ENST00000467663 KRTAP10-11P60412 298 aa9.3□□□□□ -0.92
CTNS-205ENST00000467663 C15orf32Q32M92 178 aa9.3□□□□□ -0.92
CTNS-205ENST00000467663 LCNL1Q6ZST4 164 aa9.3□□□□□ -0.92
CTNS-205ENST00000467663 OR1L4Q8NGR5 311 aa9.3□□□□□ -0.92
CTNS-205ENST00000467663 ZNF502Q8TBZ5 544 aa9.3□□□□□ -0.92
CTNS-205ENST00000467663 MYOZ3Q8TDC0 251 aa9.3□□□□□ -0.92
CTNS-205ENST00000467663 RAX2Q96IS3 184 aa9.3□□□□□ -0.92
CTNS-205ENST00000467663 ACTR3CQ9C0K3 210 aaPredicted RBP9.3□□□□□ -0.92
CTNS-205ENST00000467663 IGKV1D-37A0A075B6S9 117 aa9.29□□□□□ -0.92
CTNS-205ENST00000467663 IGKV1OR2-108A0A075B7D4 117 aa9.29□□□□□ -0.92
CTNS-205ENST00000467663 TRAV1-1A0A0B4J248 108 aa9.29□□□□□ -0.92
CTNS-205ENST00000467663 A0A1W2PPV4 95 aa9.29□□□□□ -0.92
CTNS-205ENST00000467663 SEC14L6B5MCN3 397 aa9.29□□□□□ -0.92
CTNS-205ENST00000467663 K7EIL1 84 aa9.29□□□□□ -0.92
CTNS-205ENST00000467663 NUPL2O15504 423 aaKnown RBP9.29□□□□□ -0.92
CTNS-205ENST00000467663 TOMM40O96008 361 aa9.29□□□□□ -0.92
CTNS-205ENST00000467663 Q56UQ5 140 aa9.29□□□□□ -0.92
CTNS-205ENST00000467663 STPG3Q8N7X2 389 aa9.29□□□□□ -0.92
CTNS-205ENST00000467663 OR10G4Q8NGN3 311 aa9.29□□□□□ -0.92
CTNS-205ENST00000467663 OR10G9Q8NGN4 311 aa9.29□□□□□ -0.92
CTNS-205ENST00000467663 OR10G7Q8NGN6 311 aa9.29□□□□□ -0.92
CTNS-205ENST00000467663 LYPD6BQ8NI32 183 aa9.29□□□□□ -0.92
CTNS-205ENST00000467663 C4orf3Q8WVX3 66 aa9.29□□□□□ -0.92
CTNS-205ENST00000467663 MRPL32Q9BYC8 188 aaKnown RBP9.29□□□□□ -0.92
CTNS-205ENST00000467663 PFDN2Q9UHV9 154 aa9.29□□□□□ -0.92
CTNS-205ENST00000467663 CTXND1A0A1B0GTU2 59 aa9.28□□□□□ -0.92
CTNS-205ENST00000467663 LINC00862A6NCI5 91 aa9.28□□□□□ -0.92
CTNS-205ENST00000467663 H2AFB1P0C5Y9 115 aa9.28□□□□□ -0.92
CTNS-205ENST00000467663 LINC00869P0C866 280 aa9.28□□□□□ -0.92
CTNS-205ENST00000467663 HOXD3P31249 432 aaPredicted RBP9.28□□□□□ -0.92
CTNS-205ENST00000467663 RAB9AP51151 201 aa9.28□□□□□ -0.92
CTNS-205ENST00000467663 TPPP2P59282 170 aa9.28□□□□□ -0.92
CTNS-205ENST00000467663 RHOBP62745 196 aa9.28□□□□□ -0.92
CTNS-205ENST00000467663 RELQ04864 619 aaPredicted RBP9.28□□□□□ -0.92
CTNS-205ENST00000467663 ZNF616Q08AN1 781 aa9.28□□□□□ -0.92
CTNS-205ENST00000467663 KIAA0141Q14154 515 aaPredicted RBP9.28□□□□□ -0.92
CTNS-205ENST00000467663 FAM74A1Q5RGS3 127 aa9.28□□□□□ -0.92
CTNS-205ENST00000467663 Q8WTZ3 238 aa9.28□□□□□ -0.92
CTNS-205ENST00000467663 MBD3L1Q8WWY6 194 aa9.28□□□□□ -0.92
CTNS-205ENST00000467663 DPF1Q92782 380 aa9.28□□□□□ -0.92
CTNS-205ENST00000467663 DUX3Q96PT4 197 aa9.28□□□□□ -0.92
CTNS-205ENST00000467663 RPRMQ9NS64 109 aa9.28□□□□□ -0.92
CTNS-205ENST00000467663 OR2C1O95371 312 aa9.27□□□□□ -0.93
CTNS-205ENST00000467663 RD3LP0DJH9 198 aa9.27□□□□□ -0.93
CTNS-205ENST00000467663 TAGLN2P37802 199 aaKnown RBP9.27□□□□□ -0.93
CTNS-205ENST00000467663 PPT1P50897 306 aa9.27□□□□□ -0.93
CTNS-205ENST00000467663 TAS2R45P59539 299 aa9.27□□□□□ -0.93
CTNS-205ENST00000467663 FHL3Q13643 280 aa9.27□□□□□ -0.93
CTNS-205ENST00000467663 PMS2P11Q13670 270 aa9.27□□□□□ -0.93
CTNS-205ENST00000467663 DEFB136Q30KP8 78 aa9.27□□□□□ -0.93
CTNS-205ENST00000467663 MIC13Q5XKP0 118 aa9.27□□□□□ -0.93
CTNS-205ENST00000467663 ZNF343Q6P1L6 599 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms