RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 MPTX1A8MV57 137 aa13.35□□□□□ -0.27
CGREF1-208ENST00000467539 WRBO00258 174 aa13.35□□□□□ -0.27
CGREF1-208ENST00000467539 BUB3O43684 328 aa13.35□□□□□ -0.27
CGREF1-208ENST00000467539 DHRS2Q13268 280 aa13.35□□□□□ -0.27
CGREF1-208ENST00000467539 LYG2Q86SG7 212 aa13.35□□□□□ -0.27
CGREF1-208ENST00000467539 STXBP6Q8NFX7 210 aa13.35□□□□□ -0.27
CGREF1-208ENST00000467539 COQ8AQ8NI60 647 aa13.35□□□□□ -0.27
CGREF1-208ENST00000467539 DCANP1Q8TF63 244 aa13.35□□□□□ -0.27
CGREF1-208ENST00000467539 GLMPQ8WWB7 406 aa13.35□□□□□ -0.27
CGREF1-208ENST00000467539 ZFP92A6NM28 416 aa13.34□□□□□ -0.27
CGREF1-208ENST00000467539 PLA2G10O15496 165 aa13.34□□□□□ -0.27
CGREF1-208ENST00000467539 ADAP1O75689 374 aa13.34□□□□□ -0.27
CGREF1-208ENST00000467539 SNRPGP15A8MWD9 76 aa13.33□□□□□ -0.28
CGREF1-208ENST00000467539 IFNA21P01568 189 aa13.33□□□□□ -0.28
CGREF1-208ENST00000467539 FABP1P07148 127 aa13.33□□□□□ -0.28
CGREF1-208ENST00000467539 ANXA7P20073 488 aaKnown RBP13.33□□□□□ -0.28
CGREF1-208ENST00000467539 ZNF90Q03938 601 aa13.33□□□□□ -0.28
CGREF1-208ENST00000467539 LEMD1Q68G75 181 aa13.33□□□□□ -0.28
CGREF1-208ENST00000467539 GATAD1Q8WUU5 269 aa13.33□□□□□ -0.28
CGREF1-208ENST00000467539 RNF125Q96EQ8 232 aa13.33□□□□□ -0.28
CGREF1-208ENST00000467539 TRGV9Q99603 122 aa13.33□□□□□ -0.28
CGREF1-208ENST00000467539 PFDN2Q9UHV9 154 aa13.33□□□□□ -0.28
CGREF1-208ENST00000467539 LYSTQ99698 3801 aa13.32□□□□□ -0.28
CGREF1-208ENST00000467539 A0A0J9YWU9 116 aa13.32□□□□□ -0.28
CGREF1-208ENST00000467539 PRSS46E5RG02 174 aa13.32□□□□□ -0.28
CGREF1-208ENST00000467539 ATF4P18848 351 aaPredicted RBP13.32□□□□□ -0.28
CGREF1-208ENST00000467539 C4orf46Q504U0 113 aa13.32□□□□□ -0.28
CGREF1-208ENST00000467539 OR8G2PQ6IF36 304 aa13.32□□□□□ -0.28
CGREF1-208ENST00000467539 LINC00299Q6ZSB3 139 aa13.32□□□□□ -0.28
CGREF1-208ENST00000467539 THAP8Q8NA92 274 aa13.32□□□□□ -0.28
CGREF1-208ENST00000467539 SEPSECSQ9HD40 501 aaKnown RBP13.32□□□□□ -0.28
CGREF1-208ENST00000467539 PAIP2BQ9ULR5 123 aaKnown RBP13.32□□□□□ -0.28
CGREF1-208ENST00000467539 LCE6AA0A183 80 aa13.31□□□□□ -0.28
CGREF1-208ENST00000467539 SPANXN5Q5MJ07 72 aa13.31□□□□□ -0.28
CGREF1-208ENST00000467539 STHQ8IWL8 128 aa13.31□□□□□ -0.28
CGREF1-208ENST00000467539 OR4D5Q8NGN0 318 aa13.31□□□□□ -0.28
CGREF1-208ENST00000467539 STRAPQ9Y3F4 350 aaKnown RBP13.31□□□□□ -0.28
CGREF1-208ENST00000467539 IGKV1OR2-108A0A075B7D4 117 aa13.3□□□□□ -0.28
CGREF1-208ENST00000467539 LYRM1O43325 122 aa13.3□□□□□ -0.28
CGREF1-208ENST00000467539 CFDP00746 253 aaPredicted RBP13.3□□□□□ -0.28
CGREF1-208ENST00000467539 ZNF688P0C7X2 276 aa13.3□□□□□ -0.28
CGREF1-208ENST00000467539 NUP62P37198 522 aaPredicted RBP13.3□□□□□ -0.28
CGREF1-208ENST00000467539 NKX2-1P43699 371 aaPredicted RBP13.3□□□□□ -0.28
CGREF1-208ENST00000467539 POLR2GP62487 172 aaKnown RBP eCLIP13.3□□□□□ -0.28
CGREF1-208ENST00000467539 SIGLEC15Q6ZMC9 328 aa13.3□□□□□ -0.28
CGREF1-208ENST00000467539 MITD1Q8WV92 249 aa13.3□□□□□ -0.28
CGREF1-208ENST00000467539 SMIM8Q96KF7 97 aa13.3□□□□□ -0.28
CGREF1-208ENST00000467539 RARRES2Q99969 163 aa13.3□□□□□ -0.28
CGREF1-208ENST00000467539 PBDC1Q9BVG4 233 aa13.3□□□□□ -0.28
CGREF1-208ENST00000467539 C1orf194Q5T5A4 169 aa13.29□□□□□ -0.28
CGREF1-208ENST00000467539 TRPT1Q86TN4 253 aaKnown RBP13.29□□□□□ -0.28
CGREF1-208ENST00000467539 RAB40CQ96S21 281 aa13.29□□□□□ -0.28
CGREF1-208ENST00000467539 NRN1Q9NPD7 142 aa13.29□□□□□ -0.28
CGREF1-208ENST00000467539 CA1P00915 261 aaPredicted RBP13.28□□□□□ -0.28
CGREF1-208ENST00000467539 TCRBP04435 133 aa13.28□□□□□ -0.28
CGREF1-208ENST00000467539 EWSR1Q01844 656 aaKnown RBP eCLIP13.28□□□□□ -0.28
CGREF1-208ENST00000467539 TMEM217Q8N7C4 229 aa13.28□□□□□ -0.28
CGREF1-208ENST00000467539 CCDC32Q9BV29 185 aa13.28□□□□□ -0.28
CGREF1-208ENST00000467539 PSENENQ9NZ42 101 aa13.28□□□□□ -0.28
CGREF1-208ENST00000467539 SACSQ9NZJ4 4579 aa13.27□□□□□ -0.28
CGREF1-208ENST00000467539 KNCNA6PVL3 124 aa13.27□□□□□ -0.29
CGREF1-208ENST00000467539 PAX9P55771 341 aa13.27□□□□□ -0.29
CGREF1-208ENST00000467539 SNRPD3P62318 126 aaKnown RBP13.27□□□□□ -0.29
CGREF1-208ENST00000467539 OR2F1Q13607 317 aa13.27□□□□□ -0.29
CGREF1-208ENST00000467539 IAH1Q2TAA2 248 aaPredicted RBP13.27□□□□□ -0.29
CGREF1-208ENST00000467539 TMEM41BQ5BJD5 291 aa13.27□□□□□ -0.29
CGREF1-208ENST00000467539 MORN3Q6PF18 240 aaPredicted RBP13.27□□□□□ -0.29
CGREF1-208ENST00000467539 OR11H2Q8NH07 326 aa13.27□□□□□ -0.29
CGREF1-208ENST00000467539 C20orf85Q9H1P6 137 aa13.27□□□□□ -0.29
CGREF1-208ENST00000467539 FBXL17Q9UF56 701 aa13.27□□□□□ -0.29
CGREF1-208ENST00000467539 PMS2P5A8MQ11 134 aa13.26□□□□□ -0.29
CGREF1-208ENST00000467539 H3BP45 60 aa13.26□□□□□ -0.29
CGREF1-208ENST00000467539 GIG44P09565 113 aaPredicted RBP13.26□□□□□ -0.29
CGREF1-208ENST00000467539 SPP1P10451 314 aa13.26□□□□□ -0.29
CGREF1-208ENST00000467539 LYZP61626 148 aa13.26□□□□□ -0.29
CGREF1-208ENST00000467539 PSMG4Q5JS54 123 aa13.26□□□□□ -0.29
CGREF1-208ENST00000467539 TMEM144Q7Z5S9 345 aa13.26□□□□□ -0.29
CGREF1-208ENST00000467539 ZBTB8BQ8NAP8 495 aaPredicted RBP13.26□□□□□ -0.29
CGREF1-208ENST00000467539 A6NHS1 94 aa13.25□□□□□ -0.29
CGREF1-208ENST00000467539 TAS2R30P59541 319 aa13.25□□□□□ -0.29
CGREF1-208ENST00000467539 ACTL10Q5JWF8 245 aa13.25□□□□□ -0.29
CGREF1-208ENST00000467539 S100ZQ8WXG8 99 aa13.25□□□□□ -0.29
CGREF1-208ENST00000467539 GSKIPQ9P0R6 139 aa13.25□□□□□ -0.29
CGREF1-208ENST00000467539 SLC45A2Q9UMX9 530 aa13.25□□□□□ -0.29
CGREF1-208ENST00000467539 AGRNO00468 2067 aa13.24□□□□□ -0.29
CGREF1-208ENST00000467539 SSSCA1O60232 199 aa13.24□□□□□ -0.29
CGREF1-208ENST00000467539 TMEM14EPQ6UXP3 125 aa13.24□□□□□ -0.29
CGREF1-208ENST00000467539 TMEM182Q6ZP80 229 aaPredicted RBP13.24□□□□□ -0.29
CGREF1-208ENST00000467539 BPIFCQ8NFQ6 507 aa13.24□□□□□ -0.29
CGREF1-208ENST00000467539 TRAV6A0A075B6T7 132 aa13.23□□□□□ -0.29
CGREF1-208ENST00000467539 ACOT7LQ6ZUV0 252 aa13.23□□□□□ -0.29
CGREF1-208ENST00000467539 OR8I2Q8N0Y5 310 aa13.23□□□□□ -0.29
CGREF1-208ENST00000467539 ZNF431Q8TF32 576 aaPredicted RBP13.23□□□□□ -0.29
CGREF1-208ENST00000467539 PPP1R14BQ96C90 147 aa13.23□□□□□ -0.29
CGREF1-208ENST00000467539 NPVFQ9HCQ7 196 aa13.23□□□□□ -0.29
CGREF1-208ENST00000467539 RYR2Q92736 4967 aa13.22□□□□□ -0.29
CGREF1-208ENST00000467539 CXorf65A6NEN9 183 aa13.22□□□□□ -0.29
CGREF1-208ENST00000467539 FNDC10F2Z333 226 aa13.22□□□□□ -0.29
CGREF1-208ENST00000467539 H3BMM0 161 aa13.22□□□□□ -0.29
CGREF1-208ENST00000467539 TSC22D2O75157 780 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms