RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 SNAPC4Q5SXM2 1469 aa0.04□□□□□ -2.4
SMC4-207ENST00000467263 IGHV1-58A0A0C4DH39 117 aa0.04□□□□□ -2.4
SMC4-207ENST00000467263 TCRBV4S1A1TA0A5B7 111 aa0.04□□□□□ -2.4
SMC4-207ENST00000467263 GADD45GO95257 159 aa0.04□□□□□ -2.4
SMC4-207ENST00000467263 ZNF682O95780 498 aa0.04□□□□□ -2.4
SMC4-207ENST00000467263 IFNA5P01569 189 aa0.04□□□□□ -2.4
SMC4-207ENST00000467263 IGLV3-1P01715 115 aa0.04□□□□□ -2.4
SMC4-207ENST00000467263 OR2T10Q8NGZ9 312 aa0.04□□□□□ -2.4
SMC4-207ENST00000467263 TMEM254Q8TBM7 123 aa0.04□□□□□ -2.4
SMC4-207ENST00000467263 PRRT1Q99946 306 aa0.04□□□□□ -2.4
SMC4-207ENST00000467263 ZDBF2Q9HCK1 2354 aa0.04□□□□□ -2.4
SMC4-207ENST00000467263 NEO1Q92859 1461 aa0.03□□□□□ -2.4
SMC4-207ENST00000467263 SCN8AQ9UQD0 1980 aa0.03□□□□□ -2.4
SMC4-207ENST00000467263 MEGF8Q7Z7M0 2845 aa0.03□□□□□ -2.4
SMC4-207ENST00000467263 NUPR1O60356 82 aa0.03□□□□□ -2.4
SMC4-207ENST00000467263 DHFRP00374 187 aa0.03□□□□□ -2.4
SMC4-207ENST00000467263 ANP32AP39687 249 aaKnown RBP0.03□□□□□ -2.4
SMC4-207ENST00000467263 NKX2-5P52952 324 aaPredicted RBP0.03□□□□□ -2.4
SMC4-207ENST00000467263 RHOBP62745 196 aa0.03□□□□□ -2.4
SMC4-207ENST00000467263 CCDC122Q5T0U0 273 aa0.03□□□□□ -2.4
SMC4-207ENST00000467263 LINC00575Q6W349 94 aa0.03□□□□□ -2.4
SMC4-207ENST00000467263 OR2T35Q8NGX2 323 aa0.03□□□□□ -2.4
SMC4-207ENST00000467263 SLAMF6Q96DU3 332 aa0.03□□□□□ -2.4
SMC4-207ENST00000467263 MAP3K5Q99683 1374 aa0.03□□□□□ -2.4
SMC4-207ENST00000467263 PLXNA4Q9HCM2 1894 aa0.03□□□□□ -2.41
SMC4-207ENST00000467263 PHRF1Q9P1Y6 1649 aaKnown RBP0.02□□□□□ -2.41
SMC4-207ENST00000467263 MUC4Q99102 2169 aa0.02□□□□□ -2.41
SMC4-207ENST00000467263 CETN3O15182 167 aa0.02□□□□□ -2.41
SMC4-207ENST00000467263 TTRP02766 147 aa0.02□□□□□ -2.41
SMC4-207ENST00000467263 Q8IYB0 196 aa0.02□□□□□ -2.41
SMC4-207ENST00000467263 DDI1Q8WTU0 396 aa0.02□□□□□ -2.41
SMC4-207ENST00000467263 C8orf76Q96K31 380 aa0.02□□□□□ -2.41
SMC4-207ENST00000467263 PSTPIP2Q9H939 334 aa0.02□□□□□ -2.41
SMC4-207ENST00000467263 ORMDL1Q9P0S3 153 aa0.02□□□□□ -2.41
SMC4-207ENST00000467263 VPS29Q9UBQ0 182 aa0.02□□□□□ -2.41
SMC4-207ENST00000467263 TNFSF18Q9UNG2 199 aa0.02□□□□□ -2.41
SMC4-207ENST00000467263 MYH7BA7E2Y1 1941 aa0.01□□□□□ -2.41
SMC4-207ENST00000467263 AHSA1O95433 338 aa0.01□□□□□ -2.41
SMC4-207ENST00000467263 SPINK7P58062 85 aa0.01□□□□□ -2.41
SMC4-207ENST00000467263 MAGOHP61326 146 aaKnown RBP0.01□□□□□ -2.41
SMC4-207ENST00000467263 DYNLT1P63172 113 aa0.01□□□□□ -2.41
SMC4-207ENST00000467263 OR52L1Q8NGH7 329 aa0.01□□□□□ -2.41
SMC4-207ENST00000467263 LINC00052Q96N35 136 aa0.01□□□□□ -2.41
SMC4-207ENST00000467263 RIMBP3CA6NJZ7 1639 aa0□□□□□ -2.41
SMC4-207ENST00000467263 RIMBP3BA6NNM3 1639 aa0□□□□□ -2.41
SMC4-207ENST00000467263 CNIH1O95406 144 aa0□□□□□ -2.41
SMC4-207ENST00000467263 IFNA16P05015 189 aa0□□□□□ -2.41
SMC4-207ENST00000467263 CD2P06729 351 aa0□□□□□ -2.41
SMC4-207ENST00000467263 SMIM17P0DL12 118 aa0□□□□□ -2.41
SMC4-207ENST00000467263 HOXA6P31267 233 aa0□□□□□ -2.41
SMC4-207ENST00000467263 COTL1Q14019 142 aa0□□□□□ -2.41
SMC4-207ENST00000467263 ARHGEF28Q8N1W1 1705 aaKnown RBP0□□□□□ -2.41
SMC4-207ENST00000467263 C12orf45Q8N5I9 185 aaPredicted RBP0□□□□□ -2.41
SMC4-207ENST00000467263 SLC30A7Q8NEW0 376 aa0□□□□□ -2.41
SMC4-207ENST00000467263 TSKUQ8WUA8 353 aa0□□□□□ -2.41
SMC4-207ENST00000467263 GPER1Q99527 375 aa0□□□□□ -2.41
SMC4-207ENST00000467263 PRADC1Q9BSG0 188 aa0□□□□□ -2.41
SMC4-207ENST00000467263 RIMBP3Q9UFD9 1639 aa0□□□□□ -2.41
SMC4-207ENST00000467263 FBXO5Q9UKT4 447 aa0□□□□□ -2.41
SMC4-207ENST00000467263 TET1Q8NFU7 2136 aa-0.01□□□□□ -2.41
SMC4-207ENST00000467263 BDP1A6H8Y1 2624 aa-0.01□□□□□ -2.41
SMC4-207ENST00000467263 hCG_1818297A0A087WSY0 165 aa-0.01□□□□□ -2.41
SMC4-207ENST00000467263 CLDN24A6NM45 220 aa-0.01□□□□□ -2.41
SMC4-207ENST00000467263 A8MT66 165 aa-0.01□□□□□ -2.41
SMC4-207ENST00000467263 CYB5BO43169 146 aa-0.01□□□□□ -2.41
SMC4-207ENST00000467263 SERPINE1P05121 402 aa-0.01□□□□□ -2.41
SMC4-207ENST00000467263 DEFA3P59666 94 aa-0.01□□□□□ -2.41
SMC4-207ENST00000467263 HAGHLQ6PII5 290 aaPredicted RBP-0.01□□□□□ -2.41
SMC4-207ENST00000467263 GRINAQ7Z429 371 aa-0.01□□□□□ -2.41
SMC4-207ENST00000467263 EXOC3-AS1Q8N2X6 119 aa-0.01□□□□□ -2.41
SMC4-207ENST00000467263 CLDN22Q8N7P3 220 aa-0.01□□□□□ -2.41
SMC4-207ENST00000467263 GDPD1Q8N9F7 314 aa-0.01□□□□□ -2.41
SMC4-207ENST00000467263 CT55Q8WUE5 264 aa-0.01□□□□□ -2.41
SMC4-207ENST00000467263 IGLV3-32A0A0A0MS00 114 aa-0.02□□□□□ -2.41
SMC4-207ENST00000467263 K7EIL1 84 aa-0.02□□□□□ -2.41
SMC4-207ENST00000467263 TIMM17BO60830 172 aa-0.02□□□□□ -2.41
SMC4-207ENST00000467263 SERPINA6P08185 405 aa-0.02□□□□□ -2.41
SMC4-207ENST00000467263 C12orf74Q32Q52 190 aa-0.02□□□□□ -2.41
SMC4-207ENST00000467263 C2orf82Q6UX34 121 aa-0.02□□□□□ -2.41
SMC4-207ENST00000467263 SLC25A40Q8TBP6 338 aa-0.02□□□□□ -2.41
SMC4-207ENST00000467263 C2orf50Q96LR7 162 aa-0.02□□□□□ -2.41
SMC4-207ENST00000467263 TP53RKQ96S44 253 aa-0.02□□□□□ -2.41
SMC4-207ENST00000467263 CMSS1Q9BQ75 279 aaKnown RBP-0.02□□□□□ -2.41
SMC4-207ENST00000467263 IDI2-AS1Q9NZ38 188 aa-0.02□□□□□ -2.41
SMC4-207ENST00000467263 OBSL1O75147 1896 aa-0.02□□□□□ -2.41
SMC4-207ENST00000467263 SIP14410 1827 aa-0.02□□□□□ -2.41
SMC4-207ENST00000467263 FANCMQ8IYD8 2048 aa-0.03□□□□□ -2.41
SMC4-207ENST00000467263 TNS3Q68CZ2 1445 aa-0.03□□□□□ -2.41
SMC4-207ENST00000467263 hADV38S2A0JD32 116 aa-0.03□□□□□ -2.41
SMC4-207ENST00000467263 SMIM9A6NGZ8 99 aa-0.03□□□□□ -2.41
SMC4-207ENST00000467263 M0R036 132 aa-0.03□□□□□ -2.41
SMC4-207ENST00000467263 FAM172AQ8WUF8 416 aa-0.03□□□□□ -2.41
SMC4-207ENST00000467263 PSMF1Q92530 271 aa-0.03□□□□□ -2.41
SMC4-207ENST00000467263 UCK1Q9HA47 277 aa-0.03□□□□□ -2.41
SMC4-207ENST00000467263 PPIBP23284 216 aaKnown RBP-0.04□□□□□ -2.42
SMC4-207ENST00000467263 KDELR1P24390 212 aa-0.04□□□□□ -2.42
SMC4-207ENST00000467263 SRIP30626 198 aa-0.04□□□□□ -2.42
SMC4-207ENST00000467263 RNASE4P34096 147 aaKnown RBP-0.04□□□□□ -2.42
SMC4-207ENST00000467263 AP3S2P59780 193 aa-0.04□□□□□ -2.42
SMC4-207ENST00000467263 EIF5AP63241 154 aaKnown RBP-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms