RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 ZNF727A8MUV8 499 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 ATP6V0E1O15342 81 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 SCGB2A1O75556 95 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 TOMM40O96008 361 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 TGFAP01135 160 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 AMY1AP04745 511 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 CEBPGP53567 150 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 C19orf54Q5BKX5 351 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 OR51G1Q8NGK1 321 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 ATP6V0BQ99437 205 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 SDF2L1Q9HCN8 221 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 RPS10P5Q9NQ39 176 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 ZNF355PQ9NSJ1 428 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 C21orf62Q9NYP8 219 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 DOK5Q9P104 306 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 NAT8Q9UHE5 227 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 ZNF580Q9UK33 172 aa7.48□□□□□ -1.21
APOBEC1-202ENST00000467171 ABCA2Q9BZC7 2435 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 IGHV3-21A0A0B4J1V1 117 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 OR7C2O60412 319 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 NDUFB8O95169 186 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 OR2C1O95371 312 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 IGF1P05019 195 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 RD3LP0DJH9 198 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 PSG1P11464 419 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 ORM2P19652 201 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 NPPCP23582 126 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 ATP5G3P48201 142 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 TMEM241Q24JQ0 296 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 TIGITQ495A1 244 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 CST9LP1Q5W188 147 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 TMEM88Q6PEY1 159 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 UNQ5815/PRO19632Q6UWF5 114 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 LINC00305Q7Z4B0 112 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 S100A7AQ86SG5 101 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 CBLN2Q8IUK8 224 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 OR5T1Q8NG75 326 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 OR5AU1Q8NGC0 362 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 UHRF2Q96PU4 802 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 SMIM7Q9BQ49 75 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 TCEAL7Q9BRU2 100 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 PARLQ9H300 379 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 OR51M1Q9H341 326 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 TMEM242Q9NWH2 141 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 GAR1Q9NY12 217 aaKnown RBP7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 MRPL27Q9P0M9 148 aaKnown RBP7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 PRELID1Q9Y255 219 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 YTHDF2Q9Y5A9 579 aaKnown RBP7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 NAV3Q8IVL0 2385 aa7.47□□□□□ -1.21
APOBEC1-202ENST00000467171 FBN2P35556 2912 aa7.46□□□□□ -1.21
APOBEC1-202ENST00000467171 WI2-2373I1.2A0A1W2PRP0 233 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 CXorf65A6NEN9 183 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 H3BUA1 57 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 H3BUX3 64 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 GNG7O60262 68 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 IGHG2P01859 326 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 UBE2G2P60604 165 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 MORN5Q5VZ52 161 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 CYB5R2Q6BCY4 276 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 TMEM219Q86XT9 240 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 TEX29Q8N6K0 151 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 C15orf54Q8N8G6 183 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 NECAP1Q8NC96 275 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 OR1B1Q8NGR6 318 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 Q96MF0 132 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 PAXXQ9BUH6 204 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 C20orf24Q9BUV8 137 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 CTDSP1Q9GZU7 261 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 PRDM13Q9H4Q3 707 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 TMEM14CQ9P0S9 112 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 FBXL7Q9UJT9 491 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 HIGD1AQ9Y241 93 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 PLXNB1O43157 2135 aa7.46□□□□□ -1.22
APOBEC1-202ENST00000467171 TRAV5A0A0B4J249 113 aa7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 TRAV41A0A0B4J266 112 aa7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 TSPAN4O14817 238 aa7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 NUPL2O15504 423 aaKnown RBP7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 OR2J3O76001 311 aa7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 UBE2L3P68036 154 aaKnown RBP7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 ECSCRQ19T08 205 aa7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 ZNF343Q6P1L6 599 aa7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 ZNF491Q8N8L2 437 aa7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 OR5R1Q8NH85 324 aa7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 ZNF502Q8TBZ5 544 aa7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 Q8WTZ3 238 aa7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 RPUSD4Q96CM3 377 aaKnown RBP7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 FXYD5Q96DB9 178 aa7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 SHANK2-AS3Q9BTD1 123 aa7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 GSX1Q9H4S2 264 aaPredicted RBP7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 RNF24Q9Y225 148 aa7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 SOX21Q9Y651 276 aaPredicted RBP7.45□□□□□ -1.22
APOBEC1-202ENST00000467171 FAM223BA6NKX1 122 aa7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 LINC01548A6NM66 108 aa7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 COLCA2A8K830 154 aa7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 C9JCJ5 164 aa7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 NDUFB4O95168 129 aa7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 CTSGP08311 255 aa7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 S100A7P31151 101 aa7.44□□□□□ -1.22
APOBEC1-202ENST00000467171 LYZP61626 148 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms