RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 CHEK1O14757 476 aa10.46□□□□□ -0.74
CXCR4-203ENST00000466288 HRASP01112 189 aa10.46□□□□□ -0.74
CXCR4-203ENST00000466288 AMBPP02760 352 aa10.46□□□□□ -0.74
CXCR4-203ENST00000466288 GNRHRP30968 328 aa10.46□□□□□ -0.74
CXCR4-203ENST00000466288 HTR2BP41595 481 aa10.46□□□□□ -0.74
CXCR4-203ENST00000466288 FXYD4P59646 89 aa10.46□□□□□ -0.74
CXCR4-203ENST00000466288 SMCO1Q147U7 214 aa10.46□□□□□ -0.74
CXCR4-203ENST00000466288 FAM90A2PQ658T7 463 aa10.46□□□□□ -0.74
CXCR4-203ENST00000466288 SPSB3Q6PJ21 355 aa10.46□□□□□ -0.74
CXCR4-203ENST00000466288 TMEM56Q96MV1 263 aa10.46□□□□□ -0.74
CXCR4-203ENST00000466288 RHPN1-AS1Q9BWJ2 59 aa10.46□□□□□ -0.74
CXCR4-203ENST00000466288 SLC5A7Q9GZV3 580 aa10.46□□□□□ -0.74
CXCR4-203ENST00000466288 TMEM56-RWDD3S4R434 201 aa10.46□□□□□ -0.74
CXCR4-203ENST00000466288 IGKV3-7A0A075B6H7 116 aa10.45□□□□□ -0.74
CXCR4-203ENST00000466288 C3orf85A0A1B0GTC6 90 aa10.45□□□□□ -0.74
CXCR4-203ENST00000466288 CCSO14618 274 aa10.45□□□□□ -0.74
CXCR4-203ENST00000466288 BCL2L11O43521 198 aa10.45□□□□□ -0.74
CXCR4-203ENST00000466288 CDS2O95674 445 aa10.45□□□□□ -0.74
CXCR4-203ENST00000466288 EIF5AP63241 154 aaKnown RBP10.45□□□□□ -0.74
CXCR4-203ENST00000466288 SCARB1Q8WTV0 552 aa10.45□□□□□ -0.74
CXCR4-203ENST00000466288 GLYATL2Q8WU03 294 aa10.45□□□□□ -0.74
CXCR4-203ENST00000466288 AQP10Q96PS8 301 aa10.45□□□□□ -0.74
CXCR4-203ENST00000466288 GPHA2Q96T91 129 aa10.45□□□□□ -0.74
CXCR4-203ENST00000466288 ATP6V0BQ99437 205 aa10.45□□□□□ -0.74
CXCR4-203ENST00000466288 SRSF8Q9BRL6 282 aaKnown RBP10.45□□□□□ -0.74
CXCR4-203ENST00000466288 TMEM222Q9H0R3 208 aa10.45□□□□□ -0.74
CXCR4-203ENST00000466288 ELOA3CA0A087WX78 387 aaPredicted RBP10.44□□□□□ -0.74
CXCR4-203ENST00000466288 TRAV3A0A0B4J244 114 aa10.44□□□□□ -0.74
CXCR4-203ENST00000466288 IGHV7-4-1A0A0J9YVY3 117 aa10.44□□□□□ -0.74
CXCR4-203ENST00000466288 TAAR5O14804 337 aa10.44□□□□□ -0.74
CXCR4-203ENST00000466288 GIG44P09565 113 aaPredicted RBP10.44□□□□□ -0.74
CXCR4-203ENST00000466288 OR5AC1P0C628 307 aa10.44□□□□□ -0.74
CXCR4-203ENST00000466288 UCP1P25874 307 aa10.44□□□□□ -0.74
CXCR4-203ENST00000466288 GBGT1Q8N5D6 347 aa10.44□□□□□ -0.74
CXCR4-203ENST00000466288 OR10W1Q8NGF6 305 aa10.44□□□□□ -0.74
CXCR4-203ENST00000466288 FAM212BQ9NTI7 297 aaPredicted RBP10.44□□□□□ -0.74
CXCR4-203ENST00000466288 MED9Q9NWA0 146 aa10.44□□□□□ -0.74
CXCR4-203ENST00000466288 IGHV3-21A0A0B4J1V1 117 aa10.43□□□□□ -0.74
CXCR4-203ENST00000466288 ADAP1O75689 374 aa10.43□□□□□ -0.74
CXCR4-203ENST00000466288 HOXB5P09067 269 aa10.43□□□□□ -0.74
CXCR4-203ENST00000466288 SLC25A6P12236 298 aa10.43□□□□□ -0.74
CXCR4-203ENST00000466288 MIFP14174 115 aa10.43□□□□□ -0.74
CXCR4-203ENST00000466288 IAH1Q2TAA2 248 aaPredicted RBP10.43□□□□□ -0.74
CXCR4-203ENST00000466288 GGNBP1Q5YKI7 109 aa10.43□□□□□ -0.74
CXCR4-203ENST00000466288 Q6ZR54 194 aa10.43□□□□□ -0.74
CXCR4-203ENST00000466288 TMEM116Q8NCL8 245 aa10.43□□□□□ -0.74
CXCR4-203ENST00000466288 LRRC20Q8TCA0 184 aa10.43□□□□□ -0.74
CXCR4-203ENST00000466288 SECTM1Q8WVN6 248 aa10.43□□□□□ -0.74
CXCR4-203ENST00000466288 ARPC5LQ9BPX5 153 aa10.43□□□□□ -0.74
CXCR4-203ENST00000466288 PLEKHA2Q9HB19 425 aa10.43□□□□□ -0.74
CXCR4-203ENST00000466288 C21orf62Q9NYP8 219 aa10.43□□□□□ -0.74
CXCR4-203ENST00000466288 MBD2Q9UBB5 411 aa10.43□□□□□ -0.74
CXCR4-203ENST00000466288 IGHV3-49A0A0A0MS15 119 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 RNF222A6NCQ9 220 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 ZNF705EA8MWA4 302 aaPredicted RBP10.42□□□□□ -0.74
CXCR4-203ENST00000466288 CDK2AP2O75956 126 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 WT1-ASQ06250 92 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 PHLDA2Q53GA4 152 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 LEMD1Q68G75 181 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 SLC25A24Q6NUK1 477 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 ZNF66Q6ZN08 573 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 SLC7A5P1Q8MH63 180 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 STOML3Q8TAV4 291 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 OR10C1Q96KK4 312 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 SCRT1Q9BWW7 348 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 X6R8D5 127 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 DEFB131BA0A096LNP1 70 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 E5RGE8 158 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 UPK2O00526 184 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 CYB5BO43169 146 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 SERPINE2P07093 398 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 CTSGP08311 255 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 F2RP25116 425 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 LRRC37A5PQ49AS3 106 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 TBC1D26Q86UD7 250 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 MAPKAPK5-AS1Q8N8E1 139 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 RBPMSQ93062 196 aaKnown RBP10.42□□□□□ -0.74
CXCR4-203ENST00000466288 QTRT1Q9BXR0 403 aaKnown RBP10.42□□□□□ -0.74
CXCR4-203ENST00000466288 COMMD5Q9GZQ3 224 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 SLC25A32Q9H2D1 315 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 CELA1Q9UNI1 258 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 NSG2Q9Y328 171 aa10.42□□□□□ -0.74
CXCR4-203ENST00000466288 IGLV2-18A0A075B6J9 118 aa10.41□□□□□ -0.74
CXCR4-203ENST00000466288 K7EIM0 57 aa10.41□□□□□ -0.74
CXCR4-203ENST00000466288 PGLYRP1O75594 196 aaPredicted RBP10.41□□□□□ -0.74
CXCR4-203ENST00000466288 OR13C7P0DN81 318 aa10.41□□□□□ -0.74
CXCR4-203ENST00000466288 DEFB131AP59861 70 aa10.41□□□□□ -0.74
CXCR4-203ENST00000466288 POU2AF1Q16633 256 aa10.41□□□□□ -0.74
CXCR4-203ENST00000466288 C12orf74Q32Q52 190 aa10.41□□□□□ -0.74
CXCR4-203ENST00000466288 EIF5AL1Q6IS14 154 aaKnown RBP10.41□□□□□ -0.74
CXCR4-203ENST00000466288 ZNF818PQ6ZRF7 136 aa10.41□□□□□ -0.74
CXCR4-203ENST00000466288 SPAG16Q8N0X2 631 aa10.41□□□□□ -0.74
CXCR4-203ENST00000466288 UBAC2Q8NBM4 344 aa10.41□□□□□ -0.74
CXCR4-203ENST00000466288 AIFM2Q9BRQ8 373 aa10.41□□□□□ -0.74
CXCR4-203ENST00000466288 NDUFAF3Q9BU61 184 aa10.41□□□□□ -0.74
CXCR4-203ENST00000466288 GSKIPQ9P0R6 139 aa10.41□□□□□ -0.74
CXCR4-203ENST00000466288 IGHV3OR16-13A0A075B7E8 117 aa10.4□□□□□ -0.74
CXCR4-203ENST00000466288 IGHV3-74A0A0B4J1X5 117 aa10.4□□□□□ -0.74
CXCR4-203ENST00000466288 RPS10-NUDT3A0A1W2PQS6 291 aa10.4□□□□□ -0.74
CXCR4-203ENST00000466288 ST8SIA3O43173 380 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms