RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 WDR12Q9GZL7 423 aaKnown RBP14.77□□□□□ -0.05
COL6A1-203ENST00000466285 BATF3Q9NR55 127 aa14.77□□□□□ -0.05
COL6A1-203ENST00000466285 C14orf166Q9Y224 244 aaKnown RBP14.77□□□□□ -0.05
COL6A1-203ENST00000466285 ABCA13Q86UQ4 5058 aa14.77□□□□□ -0.05
COL6A1-203ENST00000466285 CCDC160A6NGH7 325 aa14.76□□□□□ -0.05
COL6A1-203ENST00000466285 TOMM40O96008 361 aa14.76□□□□□ -0.05
COL6A1-203ENST00000466285 IGKV3-20P01619 116 aa14.76□□□□□ -0.05
COL6A1-203ENST00000466285 PSG1P11464 419 aa14.76□□□□□ -0.05
COL6A1-203ENST00000466285 SIGLEC15Q6ZMC9 328 aa14.76□□□□□ -0.05
COL6A1-203ENST00000466285 RNF126Q9BV68 326 aa14.76□□□□□ -0.05
COL6A1-203ENST00000466285 NRN1Q9NPD7 142 aa14.76□□□□□ -0.05
COL6A1-203ENST00000466285 GPR132Q9UNW8 380 aa14.76□□□□□ -0.05
COL6A1-203ENST00000466285 IGKV1D-37A0A075B6S9 117 aa14.75□□□□□ -0.05
COL6A1-203ENST00000466285 DEFB131BA0A096LNP1 70 aa14.75□□□□□ -0.05
COL6A1-203ENST00000466285 SLC25A4P12235 298 aa14.75□□□□□ -0.05
COL6A1-203ENST00000466285 OR51S1Q8NGJ8 323 aa14.75□□□□□ -0.05
COL6A1-203ENST00000466285 TMEM56-RWDD3S4R434 201 aa14.75□□□□□ -0.05
COL6A1-203ENST00000466285 RGS5O15539 181 aa14.74□□□□□ -0.05
COL6A1-203ENST00000466285 B3GALNT1O75752 331 aa14.74□□□□□ -0.05
COL6A1-203ENST00000466285 HLA-DRB4P13762 266 aa14.74□□□□□ -0.05
COL6A1-203ENST00000466285 HLA-DRB4X5D2U9 266 aa14.74□□□□□ -0.05
COL6A1-203ENST00000466285 NACAE9PAV3 2078 aa14.73□□□□□ -0.05
COL6A1-203ENST00000466285 M0R2N4 97 aa14.73□□□□□ -0.05
COL6A1-203ENST00000466285 RTL8CO15255 209 aa14.73□□□□□ -0.05
COL6A1-203ENST00000466285 SCGB2A1O75556 95 aa14.73□□□□□ -0.05
COL6A1-203ENST00000466285 SUPT4H1P63272 117 aaKnown RBP14.73□□□□□ -0.05
COL6A1-203ENST00000466285 ZNF90Q03938 601 aa14.73□□□□□ -0.05
COL6A1-203ENST00000466285 ZNF705AQ6ZN79 300 aaPredicted RBP14.73□□□□□ -0.05
COL6A1-203ENST00000466285 RNF125Q96EQ8 232 aa14.73□□□□□ -0.05
COL6A1-203ENST00000466285 RBKSQ9H477 322 aa14.73□□□□□ -0.05
COL6A1-203ENST00000466285 PLA2G2EQ9NZK7 142 aa14.73□□□□□ -0.05
COL6A1-203ENST00000466285 SOCS3O14543 225 aa14.72□□□□□ -0.05
COL6A1-203ENST00000466285 RD3LP0DJH9 198 aa14.72□□□□□ -0.05
COL6A1-203ENST00000466285 SULT1A3P0DMM9 295 aa14.72□□□□□ -0.05
COL6A1-203ENST00000466285 SULT1A4P0DMN0 295 aa14.72□□□□□ -0.05
COL6A1-203ENST00000466285 SURF2Q15527 256 aaPredicted RBP14.72□□□□□ -0.05
COL6A1-203ENST00000466285 LYZL2Q7Z4W2 148 aa14.72□□□□□ -0.05
COL6A1-203ENST00000466285 ZNF709Q8N972 641 aa14.72□□□□□ -0.05
COL6A1-203ENST00000466285 PBDC1Q9BVG4 233 aa14.72□□□□□ -0.05
COL6A1-203ENST00000466285 ZNF705FA8MVS1 300 aaPredicted RBP14.71□□□□□ -0.05
COL6A1-203ENST00000466285 DISC1C4P0D8 188 aa14.71□□□□□ -0.05
COL6A1-203ENST00000466285 F6UB75 175 aa14.71□□□□□ -0.05
COL6A1-203ENST00000466285 ZNF705DP0CH99 300 aaPredicted RBP14.71□□□□□ -0.05
COL6A1-203ENST00000466285 ZNF705BP0CI00 300 aaPredicted RBP14.71□□□□□ -0.05
COL6A1-203ENST00000466285 AKAIN1P0CW23 69 aa14.71□□□□□ -0.05
COL6A1-203ENST00000466285 EIF2B2P49770 351 aaKnown RBP14.71□□□□□ -0.05
COL6A1-203ENST00000466285 EMP1P54849 157 aa14.71□□□□□ -0.05
COL6A1-203ENST00000466285 SSBP1Q04837 148 aaKnown RBP14.71□□□□□ -0.05
COL6A1-203ENST00000466285 SLC35B3Q9H1N7 401 aa14.71□□□□□ -0.05
COL6A1-203ENST00000466285 HSPB7Q9UBY9 170 aa14.71□□□□□ -0.05
COL6A1-203ENST00000466285 IGHV3OR16-12A0A075B7B8 117 aa14.7□□□□□ -0.06
COL6A1-203ENST00000466285 IFNA10P01566 189 aa14.7□□□□□ -0.06
COL6A1-203ENST00000466285 SNRPD3P62318 126 aaKnown RBP14.7□□□□□ -0.06
COL6A1-203ENST00000466285 MCFD2Q8NI22 146 aa14.7□□□□□ -0.06
COL6A1-203ENST00000466285 DTD1Q8TEA8 209 aa14.7□□□□□ -0.06
COL6A1-203ENST00000466285 SOSTQ9BQB4 213 aa14.7□□□□□ -0.06
COL6A1-203ENST00000466285 ANKRD20A5PA0PJZ0 165 aa14.69□□□□□ -0.06
COL6A1-203ENST00000466285 AP2S1P53680 142 aaPredicted RBP14.69□□□□□ -0.06
COL6A1-203ENST00000466285 IL18Q14116 193 aa14.69□□□□□ -0.06
COL6A1-203ENST00000466285 GAMTQ14353 236 aa14.69□□□□□ -0.06
COL6A1-203ENST00000466285 POM121L12Q8N7R1 296 aa14.69□□□□□ -0.06
COL6A1-203ENST00000466285 C17orf77Q96MU5 243 aa14.69□□□□□ -0.06
COL6A1-203ENST00000466285 IGKV1OR2-108A0A075B7D4 117 aa14.68□□□□□ -0.06
COL6A1-203ENST00000466285 NKX2-1P43699 371 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-203ENST00000466285 OR2F1Q13607 317 aa14.68□□□□□ -0.06
COL6A1-203ENST00000466285 CNPY1Q3B7I2 92 aa14.68□□□□□ -0.06
COL6A1-203ENST00000466285 ETFRF1Q6IPR1 90 aa14.68□□□□□ -0.06
COL6A1-203ENST00000466285 LGI3Q8N145 548 aa14.68□□□□□ -0.06
COL6A1-203ENST00000466285 C15orf40Q8WUR7 153 aa14.68□□□□□ -0.06
COL6A1-203ENST00000466285 IL22RA2Q969J5 263 aa14.68□□□□□ -0.06
COL6A1-203ENST00000466285 C20orf173Q96LM9 149 aa14.68□□□□□ -0.06
COL6A1-203ENST00000466285 LINC00052Q96N35 136 aa14.68□□□□□ -0.06
COL6A1-203ENST00000466285 SAV1Q9H4B6 383 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-203ENST00000466285 CTDSPLO15194 276 aa14.67□□□□□ -0.06
COL6A1-203ENST00000466285 LYZP61626 148 aa14.67□□□□□ -0.06
COL6A1-203ENST00000466285 MRPS10P82664 201 aaKnown RBP14.67□□□□□ -0.06
COL6A1-203ENST00000466285 SMCO1Q147U7 214 aa14.67□□□□□ -0.06
COL6A1-203ENST00000466285 PRRT1Q99946 306 aa14.67□□□□□ -0.06
COL6A1-203ENST00000466285 C1QTNF4Q9BXJ3 329 aa14.67□□□□□ -0.06
COL6A1-203ENST00000466285 SEPSECSQ9HD40 501 aaKnown RBP14.67□□□□□ -0.06
COL6A1-203ENST00000466285 HSPG2P98160 4391 aa14.66□□□□□ -0.06
COL6A1-203ENST00000466285 IGLV2-18A0A075B6J9 118 aa14.66□□□□□ -0.06
COL6A1-203ENST00000466285 GSTZ1O43708 216 aaPredicted RBP14.66□□□□□ -0.06
COL6A1-203ENST00000466285 AKR1C4P17516 323 aa14.66□□□□□ -0.06
COL6A1-203ENST00000466285 KLF9Q13886 244 aaPredicted RBP14.66□□□□□ -0.06
COL6A1-203ENST00000466285 LINC00336Q6ZUF6 198 aa14.66□□□□□ -0.06
COL6A1-203ENST00000466285 C1orf158Q8N1D5 194 aa14.66□□□□□ -0.06
COL6A1-203ENST00000466285 DIRAS2Q96HU8 199 aa14.66□□□□□ -0.06
COL6A1-203ENST00000466285 NDUFAF3Q9BU61 184 aa14.66□□□□□ -0.06
COL6A1-203ENST00000466285 A0A0B4J2A0 478 aa14.65□□□□□ -0.06
COL6A1-203ENST00000466285 PRSS29PA6NIE9 313 aa14.65□□□□□ -0.06
COL6A1-203ENST00000466285 ZFP92A6NM28 416 aa14.65□□□□□ -0.06
COL6A1-203ENST00000466285 IAPPP10997 89 aa14.65□□□□□ -0.06
COL6A1-203ENST00000466285 TNFSF8P32971 234 aa14.65□□□□□ -0.06
COL6A1-203ENST00000466285 CCR6P51684 374 aa14.65□□□□□ -0.06
COL6A1-203ENST00000466285 ZNF79Q15937 498 aa14.65□□□□□ -0.06
COL6A1-203ENST00000466285 FAM222AQ5U5X8 452 aa14.65□□□□□ -0.06
COL6A1-203ENST00000466285 CCDC190Q86UF4 302 aa14.65□□□□□ -0.06
COL6A1-203ENST00000466285 NEU1Q99519 415 aa14.65□□□□□ -0.06
COL6A1-203ENST00000466285 DKK2Q9UBU2 259 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms