RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 OR51G1Q8NGK1 321 aa13.87□□□□□ -0.19
HOXA9-203ENST00000465941 PRR25Q96S07 402 aa13.87□□□□□ -0.19
HOXA9-203ENST00000465941 METTL26Q96S19 204 aa13.87□□□□□ -0.19
HOXA9-203ENST00000465941 SMCO3A2RU48 225 aa13.86□□□□□ -0.19
HOXA9-203ENST00000465941 ZNF785A8K8V0 405 aa13.86□□□□□ -0.19
HOXA9-203ENST00000465941 K7EIL1 84 aa13.86□□□□□ -0.19
HOXA9-203ENST00000465941 IL4P05112 153 aa13.86□□□□□ -0.19
HOXA9-203ENST00000465941 S100A11P31949 105 aa13.86□□□□□ -0.19
HOXA9-203ENST00000465941 BMI1P35226 326 aa13.86□□□□□ -0.19
HOXA9-203ENST00000465941 TMEM61Q8N0U2 210 aa13.86□□□□□ -0.19
HOXA9-203ENST00000465941 ASB13Q8WXK3 278 aa13.86□□□□□ -0.19
HOXA9-203ENST00000465941 SLC25A31Q9H0C2 315 aa13.86□□□□□ -0.19
HOXA9-203ENST00000465941 VSIRQ9H7M9 311 aa13.86□□□□□ -0.19
HOXA9-203ENST00000465941 IGHV3-49A0A0A0MS15 119 aa13.85□□□□□ -0.19
HOXA9-203ENST00000465941 CFDP00746 253 aaPredicted RBP13.85□□□□□ -0.19
HOXA9-203ENST00000465941 APOHP02749 345 aaPredicted RBP13.85□□□□□ -0.19
HOXA9-203ENST00000465941 HBG1P69891 147 aa13.85□□□□□ -0.19
HOXA9-203ENST00000465941 HBG2P69892 147 aa13.85□□□□□ -0.19
HOXA9-203ENST00000465941 SLC38A11Q08AI6 406 aa13.85□□□□□ -0.19
HOXA9-203ENST00000465941 USF2Q15853 346 aaPredicted RBP13.85□□□□□ -0.19
HOXA9-203ENST00000465941 LAMTOR1Q6IAA8 161 aa13.85□□□□□ -0.19
HOXA9-203ENST00000465941 TMEM217Q8N7C4 229 aa13.85□□□□□ -0.19
HOXA9-203ENST00000465941 U3KQE9 123 aa13.85□□□□□ -0.19
HOXA9-203ENST00000465941 A0A1W2PS18 150 aa13.84□□□□□ -0.19
HOXA9-203ENST00000465941 CD5P06127 495 aa13.84□□□□□ -0.19
HOXA9-203ENST00000465941 TEPPQ6URK8 271 aa13.84□□□□□ -0.19
HOXA9-203ENST00000465941 RBPMS2Q6ZRY4 209 aaKnown RBP13.84□□□□□ -0.19
HOXA9-203ENST00000465941 RNF125Q96EQ8 232 aa13.84□□□□□ -0.19
HOXA9-203ENST00000465941 RNF2Q99496 336 aa13.84□□□□□ -0.19
HOXA9-203ENST00000465941 LSM4Q9Y4Z0 139 aaKnown RBP13.84□□□□□ -0.19
HOXA9-203ENST00000465941 SELENOKQ9Y6D0 94 aa13.84□□□□□ -0.19
HOXA9-203ENST00000465941 TSPAN4O14817 238 aa13.83□□□□□ -0.2
HOXA9-203ENST00000465941 HNRNPCP07910 306 aaKnown RBP eCLIP13.83□□□□□ -0.2
HOXA9-203ENST00000465941 GIPP09681 153 aaPredicted RBP13.83□□□□□ -0.2
HOXA9-203ENST00000465941 LYL1P12980 280 aa13.83□□□□□ -0.2
HOXA9-203ENST00000465941 OR2F1Q13607 317 aa13.83□□□□□ -0.2
HOXA9-203ENST00000465941 ATP6V1FQ16864 119 aa13.83□□□□□ -0.2
HOXA9-203ENST00000465941 VWC2Q2TAL6 325 aa13.83□□□□□ -0.2
HOXA9-203ENST00000465941 FAM90A2PQ658T7 463 aa13.83□□□□□ -0.2
HOXA9-203ENST00000465941 MRAPQ8TCY5 172 aa13.83□□□□□ -0.2
HOXA9-203ENST00000465941 ST8SIA2Q92186 375 aa13.83□□□□□ -0.2
HOXA9-203ENST00000465941 NARS2Q96I59 477 aaKnown RBP13.83□□□□□ -0.2
HOXA9-203ENST00000465941 TMEM231Q9H6L2 316 aa13.83□□□□□ -0.2
HOXA9-203ENST00000465941 RABAC1Q9UI14 185 aa13.83□□□□□ -0.2
HOXA9-203ENST00000465941 IGHV3OR16-13A0A075B7E8 117 aa13.82□□□□□ -0.2
HOXA9-203ENST00000465941 IGHV3-74A0A0B4J1X5 117 aa13.82□□□□□ -0.2
HOXA9-203ENST00000465941 SELENOTP62341 195 aa13.82□□□□□ -0.2
HOXA9-203ENST00000465941 EWSR1Q01844 656 aaKnown RBP eCLIP13.82□□□□□ -0.2
HOXA9-203ENST00000465941 NHLH2Q02577 135 aa13.82□□□□□ -0.2
HOXA9-203ENST00000465941 BAXQ07812 192 aa13.82□□□□□ -0.2
HOXA9-203ENST00000465941 GUCA2BQ16661 112 aa13.82□□□□□ -0.2
HOXA9-203ENST00000465941 TMEM182Q6ZP80 229 aaPredicted RBP13.82□□□□□ -0.2
HOXA9-203ENST00000465941 CYP2G1PQ6ZSU1 146 aa13.82□□□□□ -0.2
HOXA9-203ENST00000465941 Q8N1Y9 231 aa13.82□□□□□ -0.2
HOXA9-203ENST00000465941 LILRB2Q8N423 598 aa13.82□□□□□ -0.2
HOXA9-203ENST00000465941 BPIFCQ8NFQ6 507 aa13.82□□□□□ -0.2
HOXA9-203ENST00000465941 SPAG8Q99932 426 aaPredicted RBP13.82□□□□□ -0.2
HOXA9-203ENST00000465941 UQCC1Q9NVA1 299 aa13.82□□□□□ -0.2
HOXA9-203ENST00000465941 MBD2Q9UBB5 411 aa13.82□□□□□ -0.2
HOXA9-203ENST00000465941 IGHV3-66A0A0C4DH42 116 aa13.81□□□□□ -0.2
HOXA9-203ENST00000465941 EIF2B2P49770 351 aaKnown RBP13.81□□□□□ -0.2
HOXA9-203ENST00000465941 FGL1Q08830 312 aa13.81□□□□□ -0.2
HOXA9-203ENST00000465941 GTSCR1Q86UQ5 136 aa13.81□□□□□ -0.2
HOXA9-203ENST00000465941 THAP6Q8TBB0 222 aa13.81□□□□□ -0.2
HOXA9-203ENST00000465941 GRAMD2BQ96HH9 432 aa13.81□□□□□ -0.2
HOXA9-203ENST00000465941 PBDC1Q9BVG4 233 aa13.81□□□□□ -0.2
HOXA9-203ENST00000465941 TMEM147Q9BVK8 224 aa13.81□□□□□ -0.2
HOXA9-203ENST00000465941 PFDN2Q9UHV9 154 aa13.81□□□□□ -0.2
HOXA9-203ENST00000465941 GATA2P23769 480 aaPredicted RBP13.8□□□□□ -0.2
HOXA9-203ENST00000465941 RAP2BP61225 183 aa13.8□□□□□ -0.2
HOXA9-203ENST00000465941 LYZP61626 148 aa13.8□□□□□ -0.2
HOXA9-203ENST00000465941 DEFB121Q5J5C9 76 aa13.8□□□□□ -0.2
HOXA9-203ENST00000465941 TCF24Q7RTU0 167 aa13.8□□□□□ -0.2
HOXA9-203ENST00000465941 WDR83OSQ9Y284 106 aa13.8□□□□□ -0.2
HOXA9-203ENST00000465941 DNAH3Q8TD57 4116 aa13.79□□□□□ -0.2
HOXA9-203ENST00000465941 AGPAT2O15120 278 aa13.79□□□□□ -0.2
HOXA9-203ENST00000465941 BUB3O43684 328 aa13.79□□□□□ -0.2
HOXA9-203ENST00000465941 DFFBO76075 338 aa13.79□□□□□ -0.2
HOXA9-203ENST00000465941 NUP62P37198 522 aaPredicted RBP13.79□□□□□ -0.2
HOXA9-203ENST00000465941 RAB31Q13636 194 aa13.79□□□□□ -0.2
HOXA9-203ENST00000465941 C16orf54Q6UWD8 224 aa13.79□□□□□ -0.2
HOXA9-203ENST00000465941 OR5C1Q8NGR4 320 aa13.79□□□□□ -0.2
HOXA9-203ENST00000465941 SLC45A2Q9UMX9 530 aa13.79□□□□□ -0.2
HOXA9-203ENST00000465941 SMAD5-AS1Q9Y6J3 95 aa13.79□□□□□ -0.2
HOXA9-203ENST00000465941 RPL12P30050 165 aaKnown RBP13.78□□□□□ -0.2
HOXA9-203ENST00000465941 PLP1P60201 277 aa13.78□□□□□ -0.2
HOXA9-203ENST00000465941 ZNF546Q86UE3 836 aa13.78□□□□□ -0.2
HOXA9-203ENST00000465941 CHAC2Q8WUX2 184 aa13.78□□□□□ -0.2
HOXA9-203ENST00000465941 GLMPQ8WWB7 406 aa13.78□□□□□ -0.2
HOXA9-203ENST00000465941 MGST2Q99735 147 aa13.78□□□□□ -0.2
HOXA9-203ENST00000465941 NEURL2Q9BR09 285 aa13.78□□□□□ -0.2
HOXA9-203ENST00000465941 HSPB11Q9Y547 144 aa13.78□□□□□ -0.2
HOXA9-203ENST00000465941 CD7P09564 240 aa13.77□□□□□ -0.21
HOXA9-203ENST00000465941 ORM2P19652 201 aa13.77□□□□□ -0.21
HOXA9-203ENST00000465941 CD81P60033 236 aa13.77□□□□□ -0.21
HOXA9-203ENST00000465941 PAFAH1B2P68402 229 aa13.77□□□□□ -0.21
HOXA9-203ENST00000465941 Q5BKY6 102 aa13.77□□□□□ -0.21
HOXA9-203ENST00000465941 C1orf194Q5T5A4 169 aa13.77□□□□□ -0.21
HOXA9-203ENST00000465941 STPG3Q8N7X2 389 aa13.77□□□□□ -0.21
HOXA9-203ENST00000465941 UBE2L5PA0A1B0GUS4 154 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms