RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 SLC30A7Q8NEW0 376 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 OR2T10Q8NGZ9 312 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 STAG3L4Q8TBR4 150 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 SLAMF6Q96DU3 332 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 CHMP6Q96FZ7 201 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 MRPL57Q9BQC6 102 aaKnown RBP0.65□□□□□ -2.31
SSB-207ENST00000465871 PRADC1Q9BSG0 188 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 TLNRD1Q9H1K6 362 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 BCL2L10Q9HD36 194 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 U3KQ87 197 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 ANAPC1Q9H1A4 1944 aa0.65□□□□□ -2.31
SSB-207ENST00000465871 DLG5Q8TDM6 1919 aa0.64□□□□□ -2.31
SSB-207ENST00000465871 GADD45GO95257 159 aa0.64□□□□□ -2.31
SSB-207ENST00000465871 HSD11B1P28845 292 aa0.64□□□□□ -2.31
SSB-207ENST00000465871 CTAG1AP78358 180 aa0.64□□□□□ -2.31
SSB-207ENST00000465871 BASP1P80723 227 aaKnown RBP0.64□□□□□ -2.31
SSB-207ENST00000465871 MRPS15P82914 257 aaKnown RBP0.64□□□□□ -2.31
SSB-207ENST00000465871 PDE6HQ13956 83 aa0.64□□□□□ -2.31
SSB-207ENST00000465871 TMED2Q15363 201 aa0.64□□□□□ -2.31
SSB-207ENST00000465871 TAF1AQ15573 450 aaPredicted RBP0.64□□□□□ -2.31
SSB-207ENST00000465871 DEFB113Q30KQ7 82 aa0.64□□□□□ -2.31
SSB-207ENST00000465871 GOLT1AQ6ZVE7 132 aa0.64□□□□□ -2.31
SSB-207ENST00000465871 OR11H6Q8NGC7 330 aa0.64□□□□□ -2.31
SSB-207ENST00000465871 OR10J5Q8NHC4 309 aa0.64□□□□□ -2.31
SSB-207ENST00000465871 ADAT3Q96EY9 351 aaPredicted RBP0.64□□□□□ -2.31
SSB-207ENST00000465871 OBSCN-AS1Q96MR7 158 aa0.64□□□□□ -2.31
SSB-207ENST00000465871 ZFP30Q9Y2G7 519 aa0.64□□□□□ -2.31
SSB-207ENST00000465871 C22orf24Q9Y442 160 aa0.64□□□□□ -2.31
SSB-207ENST00000465871 NCOA6Q14686 2063 aaPredicted RBP0.64□□□□□ -2.31
SSB-207ENST00000465871 ZNF106Q9H2Y7 1883 aaKnown RBP0.63□□□□□ -2.31
SSB-207ENST00000465871 TRAV12-1A0A0B4J245 112 aa0.63□□□□□ -2.31
SSB-207ENST00000465871 IGKV1-9A0A0C4DH69 117 aa0.63□□□□□ -2.31
SSB-207ENST00000465871 FAM159BA6NKW6 160 aa0.63□□□□□ -2.31
SSB-207ENST00000465871 C19orf84I3L1E1 186 aa0.63□□□□□ -2.31
SSB-207ENST00000465871 TIMM17BO60830 172 aa0.63□□□□□ -2.31
SSB-207ENST00000465871 BANF1O75531 89 aa0.63□□□□□ -2.31
SSB-207ENST00000465871 CNBPP62633 177 aaKnown RBP0.63□□□□□ -2.31
SSB-207ENST00000465871 DYNLT1P63172 113 aa0.63□□□□□ -2.31
SSB-207ENST00000465871 BCL2L15Q5TBC7 163 aa0.63□□□□□ -2.31
SSB-207ENST00000465871 SOSTDC1Q6X4U4 206 aa0.63□□□□□ -2.31
SSB-207ENST00000465871 Q8N814 137 aa0.63□□□□□ -2.31
SSB-207ENST00000465871 OR2T35Q8NGX2 323 aa0.63□□□□□ -2.31
SSB-207ENST00000465871 OR10X1Q8NGY0 326 aa0.63□□□□□ -2.31
SSB-207ENST00000465871 TEX47Q8TBZ9 253 aa0.63□□□□□ -2.31
SSB-207ENST00000465871 RASL12Q9NYN1 266 aa0.63□□□□□ -2.31
SSB-207ENST00000465871 HS3ST2Q9Y278 367 aa0.63□□□□□ -2.31
SSB-207ENST00000465871 NCOA1Q15788 1441 aa0.63□□□□□ -2.31
SSB-207ENST00000465871 PLXND1Q9Y4D7 1925 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 NEO1Q92859 1461 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 ECM29Q5VYK3 1845 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 TRGV10A0A0A0MS01 117 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 TRAV4A0A0B4J268 109 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 TAX1BP3O14907 124 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 NDUFB3O43676 98 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 DNAL4O96015 105 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 IFNA7P01567 189 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 CST2P09228 141 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 RNASE4P34096 147 aaKnown RBP0.62□□□□□ -2.31
SSB-207ENST00000465871 ATP5G3P48201 142 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 RRN3P1Q2M238 152 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 C1orf137Q5JT78 98 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 HACD4Q5VWC8 232 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 PDZD9Q8IXQ8 264 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 C3orf56Q8N813 242 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 TMEM254Q8TBM7 123 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 BORCS5Q969J3 196 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 IMUPQ9GZP8 106 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 TMEM133Q9H2Q1 129 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 PARVBQ9HBI1 364 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 C14orf132Q9NPU4 83 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 CDC42SE1Q9NRR8 79 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 ARMC1Q9NVT9 282 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 CACNA1BQ00975 2339 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 DOCK3Q8IZD9 2030 aa0.62□□□□□ -2.31
SSB-207ENST00000465871 MED1Q15648 1581 aaPredicted RBP0.62□□□□□ -2.31
SSB-207ENST00000465871 ROS1P08922 2347 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 EML6Q6ZMW3 1958 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 EXPH5Q8NEV8 1989 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 TRBV19A0A075B6N1 114 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 LOC110117498A0A087WWA1 95 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 TCRBV4S1A1TA0A5B7 111 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 ZNF736B4DX44 427 aaPredicted RBP0.61□□□□□ -2.31
SSB-207ENST00000465871 ZNF25P17030 456 aaPredicted RBP0.61□□□□□ -2.31
SSB-207ENST00000465871 CAPZBP47756 277 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 NCALDP61601 193 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 HSPE1P61604 102 aaKnown RBP0.61□□□□□ -2.31
SSB-207ENST00000465871 DEFB115Q30KQ5 88 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 FAM74A1Q5RGS3 127 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 EIF5AL1Q6IS14 154 aaKnown RBP0.61□□□□□ -2.31
SSB-207ENST00000465871 ST6GALNAC3Q8NDV1 305 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 ZNF418Q8TF45 676 aaPredicted RBP0.61□□□□□ -2.31
SSB-207ENST00000465871 C4orf3Q8WVX3 66 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 YPEL2Q96QA6 119 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 GPER1Q99527 375 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 SLC25A21Q9BQT8 299 aaPredicted RBP0.61□□□□□ -2.31
SSB-207ENST00000465871 RNF122Q9H9V4 155 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 MED29Q9NX70 200 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 ARL5AQ9Y689 179 aa0.61□□□□□ -2.31
SSB-207ENST00000465871 SCN3AQ9NY46 2000 aa0.6□□□□□ -2.31
SSB-207ENST00000465871 SCN8AQ9UQD0 1980 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms