RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 PMS2P5A8MQ11 134 aa9.02□□□□□ -0.97
APTX-213ENST00000465003 NDUFS6O75380 124 aaKnown RBP9.02□□□□□ -0.97
APTX-213ENST00000465003 IGLC1P0CG04 106 aa9.02□□□□□ -0.97
APTX-213ENST00000465003 OR10J1P30954 320 aa9.02□□□□□ -0.97
APTX-213ENST00000465003 RPL35P42766 123 aaKnown RBP9.02□□□□□ -0.97
APTX-213ENST00000465003 AKR1D1P51857 326 aa9.02□□□□□ -0.97
APTX-213ENST00000465003 ZNF90Q03938 601 aa9.02□□□□□ -0.97
APTX-213ENST00000465003 FAM106AQ4KMX7 169 aa9.02□□□□□ -0.97
APTX-213ENST00000465003 C9orf66Q5T8R8 295 aa9.02□□□□□ -0.97
APTX-213ENST00000465003 GPHB5Q86YW7 130 aa9.02□□□□□ -0.97
APTX-213ENST00000465003 EIF4E3Q8N5X7 224 aaKnown RBP9.02□□□□□ -0.97
APTX-213ENST00000465003 SMIM8Q96KF7 97 aa9.02□□□□□ -0.97
APTX-213ENST00000465003 MED28Q9H204 178 aa9.02□□□□□ -0.97
APTX-213ENST00000465003 C11orf1Q9H5F2 150 aa9.02□□□□□ -0.97
APTX-213ENST00000465003 GSN-AS1Q9NRJ2 163 aa9.02□□□□□ -0.97
APTX-213ENST00000465003 FOLR2P14207 255 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 SPSB3Q6PJ21 355 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 TMEM190Q8WZ59 177 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 PRR25Q96S07 402 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 RAB40CQ96S21 281 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 ZNF436Q9C0F3 470 aaPredicted RBP9.01□□□□□ -0.97
APTX-213ENST00000465003 OR51M1Q9H341 326 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 IGKV1D-37A0A075B6S9 117 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 TMEM238LA0A1B0GVL6 79 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 IGSF23A1L1A6 192 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 LY86O95711 162 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 APOHP02749 345 aaPredicted RBP9.01□□□□□ -0.97
APTX-213ENST00000465003 GATA2P23769 480 aaPredicted RBP9.01□□□□□ -0.97
APTX-213ENST00000465003 FCGR2BP31994 310 aaPredicted RBP9.01□□□□□ -0.97
APTX-213ENST00000465003 AKR1C1Q04828 323 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 OR2F1Q13607 317 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 BTNL8Q6UX41 500 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 TOMM20LQ6UXN7 152 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 TMEM14EPQ6UXP3 125 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 TMEM116Q8NCL8 245 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 SLC35E1Q96K37 410 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 TXN2Q99757 166 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 TCEAL7Q9BRU2 100 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 MCRIP2Q9BUT9 160 aaKnown RBP9.01□□□□□ -0.97
APTX-213ENST00000465003 ELOVL1Q9BW60 279 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 NMES1Q9C002 83 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 MLXQ9UH92 298 aa9.01□□□□□ -0.97
APTX-213ENST00000465003 RAB19A4D1S5 217 aa9□□□□□ -0.97
APTX-213ENST00000465003 ZFP92A6NM28 416 aa9□□□□□ -0.97
APTX-213ENST00000465003 NDUFA4O00483 81 aa9□□□□□ -0.97
APTX-213ENST00000465003 DEDDO75618 318 aa9□□□□□ -0.97
APTX-213ENST00000465003 SLC25A4P12235 298 aa9□□□□□ -0.97
APTX-213ENST00000465003 CBLN1P23435 193 aa9□□□□□ -0.97
APTX-213ENST00000465003 RPP30P78346 268 aaKnown RBP9□□□□□ -0.97
APTX-213ENST00000465003 FGL1Q08830 312 aa9□□□□□ -0.97
APTX-213ENST00000465003 REC114Q7Z4M0 266 aa9□□□□□ -0.97
APTX-213ENST00000465003 PEMTQ9UBM1 199 aa9□□□□□ -0.97
APTX-213ENST00000465003 S100A9P06702 114 aaKnown RBP8.99□□□□□ -0.97
APTX-213ENST00000465003 CD300EQ496F6 205 aaPredicted RBP8.99□□□□□ -0.97
APTX-213ENST00000465003 ETFRF1Q6IPR1 90 aa8.99□□□□□ -0.97
APTX-213ENST00000465003 TMEM182Q6ZP80 229 aaPredicted RBP8.99□□□□□ -0.97
APTX-213ENST00000465003 DYNLRB2Q8TF09 96 aa8.99□□□□□ -0.97
APTX-213ENST00000465003 ZFAND3Q9H8U3 227 aa8.99□□□□□ -0.97
APTX-213ENST00000465003 AURKAIP1Q9NWT8 199 aaPredicted RBP8.99□□□□□ -0.97
APTX-213ENST00000465003 IGKV3-7A0A075B6H7 116 aa8.99□□□□□ -0.97
APTX-213ENST00000465003 WI2-2373I1.2A0A1W2PRP0 233 aa8.99□□□□□ -0.97
APTX-213ENST00000465003 A8MWP6 167 aa8.99□□□□□ -0.97
APTX-213ENST00000465003 LGALS9O00182 355 aa8.99□□□□□ -0.97
APTX-213ENST00000465003 SCAF4O95104 1147 aaKnown RBP8.99□□□□□ -0.97
APTX-213ENST00000465003 MPC2O95563 127 aa8.99□□□□□ -0.97
APTX-213ENST00000465003 NHLH2Q02577 135 aa8.99□□□□□ -0.97
APTX-213ENST00000465003 TMEM252Q8N6L7 170 aa8.99□□□□□ -0.97
APTX-213ENST00000465003 DAZ1Q9NQZ3 744 aaKnown RBP8.99□□□□□ -0.97
APTX-213ENST00000465003 LYRM2Q9NU23 88 aaPredicted RBP8.99□□□□□ -0.97
APTX-213ENST00000465003 GAR1Q9NY12 217 aaKnown RBP8.99□□□□□ -0.97
APTX-213ENST00000465003 SORL1Q92673 2214 aa8.99□□□□□ -0.97
APTX-213ENST00000465003 PRKDCP78527 4128 aaKnown RBP8.98□□□□□ -0.97
APTX-213ENST00000465003 IGLV1-51P01701 117 aa8.98□□□□□ -0.97
APTX-213ENST00000465003 IL4P05112 153 aa8.98□□□□□ -0.97
APTX-213ENST00000465003 PSG1P11464 419 aa8.98□□□□□ -0.97
APTX-213ENST00000465003 PVALBP20472 110 aaPredicted RBP8.98□□□□□ -0.97
APTX-213ENST00000465003 C4BPBP20851 252 aa8.98□□□□□ -0.97
APTX-213ENST00000465003 TAS2R30P59541 319 aa8.98□□□□□ -0.97
APTX-213ENST00000465003 USF2Q15853 346 aaPredicted RBP8.98□□□□□ -0.97
APTX-213ENST00000465003 OR10P1Q8NGE3 313 aa8.98□□□□□ -0.97
APTX-213ENST00000465003 RNF126Q9BV68 326 aa8.98□□□□□ -0.97
APTX-213ENST00000465003 PBDC1Q9BVG4 233 aa8.98□□□□□ -0.97
APTX-213ENST00000465003 TRAV14DV4A0A0A6YYC5 116 aa8.97□□□□□ -0.97
APTX-213ENST00000465003 SMLR1H3BR10 107 aa8.97□□□□□ -0.97
APTX-213ENST00000465003 GPX4P36969 197 aaPredicted RBP8.97□□□□□ -0.97
APTX-213ENST00000465003 SLC38A11Q08AI6 406 aa8.97□□□□□ -0.97
APTX-213ENST00000465003 EGFEM1PQ0D2K5 195 aa8.97□□□□□ -0.97
APTX-213ENST00000465003 KPRPQ5T749 579 aaPredicted RBP8.97□□□□□ -0.97
APTX-213ENST00000465003 TMEM61Q8N0U2 210 aa8.97□□□□□ -0.97
APTX-213ENST00000465003 OR1S2Q8NGQ3 325 aa8.97□□□□□ -0.97
APTX-213ENST00000465003 LINC00052Q96N35 136 aa8.97□□□□□ -0.97
APTX-213ENST00000465003 UFC1Q9Y3C8 167 aa8.97□□□□□ -0.97
APTX-213ENST00000465003 DNASE2O00115 360 aaPredicted RBP8.97□□□□□ -0.97
APTX-213ENST00000465003 RD3LP0DJH9 198 aa8.97□□□□□ -0.97
APTX-213ENST00000465003 ATP5IP56385 69 aaPredicted RBP8.97□□□□□ -0.97
APTX-213ENST00000465003 CYCSP99999 105 aaKnown RBP8.97□□□□□ -0.97
APTX-213ENST00000465003 OR51G1Q8NGK1 321 aa8.97□□□□□ -0.97
APTX-213ENST00000465003 ATP6V0BQ99437 205 aa8.97□□□□□ -0.97
APTX-213ENST00000465003 RNF2Q99496 336 aa8.97□□□□□ -0.97
APTX-213ENST00000465003 UBE2L5PA0A1B0GUS4 154 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms