RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 TMEM222Q9H0R3 208 aa10.37□□□□□ -0.75
MCF2L-220ENST00000464800 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.37□□□□□ -0.75
MCF2L-220ENST00000464800 TMED3Q9Y3Q3 217 aa10.37□□□□□ -0.75
MCF2L-220ENST00000464800 BUB3O43684 328 aa10.36□□□□□ -0.75
MCF2L-220ENST00000464800 CDS2O95674 445 aa10.36□□□□□ -0.75
MCF2L-220ENST00000464800 RAB3DO95716 219 aa10.36□□□□□ -0.75
MCF2L-220ENST00000464800 TNP2Q05952 138 aa10.36□□□□□ -0.75
MCF2L-220ENST00000464800 FAM219AQ8IW50 185 aa10.36□□□□□ -0.75
MCF2L-220ENST00000464800 TMEM229BQ8NBD8 167 aa10.36□□□□□ -0.75
MCF2L-220ENST00000464800 OR52E5Q8NH55 327 aa10.36□□□□□ -0.75
MCF2L-220ENST00000464800 RNASEH2CQ8TDP1 164 aaKnown RBP10.36□□□□□ -0.75
MCF2L-220ENST00000464800 SAV1Q9H4B6 383 aaPredicted RBP10.36□□□□□ -0.75
MCF2L-220ENST00000464800 HEYLQ9NQ87 328 aaPredicted RBP10.36□□□□□ -0.75
MCF2L-220ENST00000464800 TOMM40O96008 361 aa10.35□□□□□ -0.75
MCF2L-220ENST00000464800 HBE1P02100 147 aa10.35□□□□□ -0.75
MCF2L-220ENST00000464800 OR5AC1P0C628 307 aa10.35□□□□□ -0.75
MCF2L-220ENST00000464800 ZNF182P17025 639 aaPredicted RBP10.35□□□□□ -0.75
MCF2L-220ENST00000464800 NUP62P37198 522 aaPredicted RBP10.35□□□□□ -0.75
MCF2L-220ENST00000464800 TAS2R19P59542 299 aa10.35□□□□□ -0.75
MCF2L-220ENST00000464800 C2orf83Q53S99 150 aa10.35□□□□□ -0.75
MCF2L-220ENST00000464800 STEAP1BQ6NZ63 245 aa10.35□□□□□ -0.75
MCF2L-220ENST00000464800 FOXI2Q6ZQN5 318 aa10.35□□□□□ -0.75
MCF2L-220ENST00000464800 ZNF709Q8N972 641 aa10.35□□□□□ -0.75
MCF2L-220ENST00000464800 C15orf53Q8NAA6 179 aa10.35□□□□□ -0.75
MCF2L-220ENST00000464800 GLYATL2Q8WU03 294 aa10.35□□□□□ -0.75
MCF2L-220ENST00000464800 C15orf40Q8WUR7 153 aa10.35□□□□□ -0.75
MCF2L-220ENST00000464800 RTBDNQ9BSG5 229 aaPredicted RBP10.35□□□□□ -0.75
MCF2L-220ENST00000464800 NAA50Q9GZZ1 169 aaKnown RBP10.35□□□□□ -0.75
MCF2L-220ENST00000464800 GOLT1BQ9Y3E0 138 aa10.35□□□□□ -0.75
MCF2L-220ENST00000464800 YTHDF2Q9Y5A9 579 aaKnown RBP10.35□□□□□ -0.75
MCF2L-220ENST00000464800 HSPG2P98160 4391 aa10.35□□□□□ -0.75
MCF2L-220ENST00000464800 TEX13DA0A0J9YY54 714 aaPredicted RBP10.34□□□□□ -0.75
MCF2L-220ENST00000464800 LOC102723971A0A1B0GUV8 181 aa10.34□□□□□ -0.75
MCF2L-220ENST00000464800 RD3LP0DJH9 198 aa10.34□□□□□ -0.75
MCF2L-220ENST00000464800 DEFB1P60022 68 aa10.34□□□□□ -0.75
MCF2L-220ENST00000464800 DAD1P61803 113 aa10.34□□□□□ -0.75
MCF2L-220ENST00000464800 CTF1Q16619 201 aa10.34□□□□□ -0.75
MCF2L-220ENST00000464800 ETFRF1Q6IPR1 90 aa10.34□□□□□ -0.75
MCF2L-220ENST00000464800 SELENOHQ8IZQ5 122 aaKnown RBP10.34□□□□□ -0.75
MCF2L-220ENST00000464800 SLC24A4Q8NFF2 622 aa10.34□□□□□ -0.75
MCF2L-220ENST00000464800 OR4B1Q8NGF8 309 aa10.34□□□□□ -0.75
MCF2L-220ENST00000464800 COQ8AQ8NI60 647 aa10.34□□□□□ -0.75
MCF2L-220ENST00000464800 LHFPL5Q8TAF8 219 aa10.34□□□□□ -0.75
MCF2L-220ENST00000464800 RBPMSQ93062 196 aaKnown RBP10.34□□□□□ -0.75
MCF2L-220ENST00000464800 GPR146Q96CH1 333 aa10.34□□□□□ -0.75
MCF2L-220ENST00000464800 LINC00052Q96N35 136 aa10.34□□□□□ -0.75
MCF2L-220ENST00000464800 CLUHP3Q96NS8 147 aa10.34□□□□□ -0.75
MCF2L-220ENST00000464800 C7orf50Q9BRJ6 194 aaKnown RBP10.34□□□□□ -0.75
MCF2L-220ENST00000464800 ATG101Q9BSB4 218 aa10.34□□□□□ -0.75
MCF2L-220ENST00000464800 CACNG5Q9UF02 275 aa10.34□□□□□ -0.75
MCF2L-220ENST00000464800 C14orf166Q9Y224 244 aaKnown RBP10.34□□□□□ -0.75
MCF2L-220ENST00000464800 CEBPZOSA8MTT3 80 aa10.33□□□□□ -0.76
MCF2L-220ENST00000464800 GABARAPH6UMI1 98 aa10.33□□□□□ -0.76
MCF2L-220ENST00000464800 GABARAPO95166 117 aa10.33□□□□□ -0.76
MCF2L-220ENST00000464800 ID1P41134 155 aa10.33□□□□□ -0.76
MCF2L-220ENST00000464800 PSMB3P49720 205 aa10.33□□□□□ -0.76
MCF2L-220ENST00000464800 MEF2DQ14814 521 aa10.33□□□□□ -0.76
MCF2L-220ENST00000464800 FAAP20Q6NZ36 180 aa10.33□□□□□ -0.76
MCF2L-220ENST00000464800 OR51G1Q8NGK1 321 aa10.33□□□□□ -0.76
MCF2L-220ENST00000464800 TMEM170AQ8WVE7 144 aa10.33□□□□□ -0.76
MCF2L-220ENST00000464800 NPIPB3Q92617 1050 aa10.33□□□□□ -0.76
MCF2L-220ENST00000464800 ACY3Q96HD9 319 aa10.33□□□□□ -0.76
MCF2L-220ENST00000464800 SLC35B3Q9H1N7 401 aa10.33□□□□□ -0.76
MCF2L-220ENST00000464800 NAA60Q9H7X0 242 aa10.33□□□□□ -0.76
MCF2L-220ENST00000464800 PSG9Q00887 426 aa10.32□□□□□ -0.76
MCF2L-220ENST00000464800 ZNF79Q15937 498 aa10.32□□□□□ -0.76
MCF2L-220ENST00000464800 RRN3P1Q2M238 152 aa10.32□□□□□ -0.76
MCF2L-220ENST00000464800 TMEM268Q5VZI3 342 aa10.32□□□□□ -0.76
MCF2L-220ENST00000464800 SPATA31B1PQ5VZV4 182 aa10.32□□□□□ -0.76
MCF2L-220ENST00000464800 GSG1LQ6UXU4 331 aa10.32□□□□□ -0.76
MCF2L-220ENST00000464800 C6orf223Q8N319 242 aa10.32□□□□□ -0.76
MCF2L-220ENST00000464800 RNF125Q96EQ8 232 aa10.32□□□□□ -0.76
MCF2L-220ENST00000464800 WDR12Q9GZL7 423 aaKnown RBP10.32□□□□□ -0.76
MCF2L-220ENST00000464800 PFDN2Q9UHV9 154 aa10.32□□□□□ -0.76
MCF2L-220ENST00000464800 NBDYA0A0U1RRE5 68 aa10.31□□□□□ -0.76
MCF2L-220ENST00000464800 NXPH3O95157 252 aa10.31□□□□□ -0.76
MCF2L-220ENST00000464800 PSG1P11464 419 aa10.31□□□□□ -0.76
MCF2L-220ENST00000464800 SSBP1Q04837 148 aaKnown RBP10.31□□□□□ -0.76
MCF2L-220ENST00000464800 SURF2Q15527 256 aaPredicted RBP10.31□□□□□ -0.76
MCF2L-220ENST00000464800 GPR107Q5VW38 600 aa10.31□□□□□ -0.76
MCF2L-220ENST00000464800 C1orf158Q8N1D5 194 aa10.31□□□□□ -0.76
MCF2L-220ENST00000464800 Q8N1X5 172 aa10.31□□□□□ -0.76
MCF2L-220ENST00000464800 PBDC1Q9BVG4 233 aa10.31□□□□□ -0.76
MCF2L-220ENST00000464800 MIXL1Q9H2W2 232 aa10.31□□□□□ -0.76
MCF2L-220ENST00000464800 CRYM-AS1A6NIL9 109 aa10.3□□□□□ -0.76
MCF2L-220ENST00000464800 DISC1C4P0D8 188 aa10.3□□□□□ -0.76
MCF2L-220ENST00000464800 SOCS3O14543 225 aa10.3□□□□□ -0.76
MCF2L-220ENST00000464800 RGS5O15539 181 aa10.3□□□□□ -0.76
MCF2L-220ENST00000464800 ALDH3B2P48448 385 aa10.3□□□□□ -0.76
MCF2L-220ENST00000464800 MRPS10P82664 201 aaKnown RBP10.3□□□□□ -0.76
MCF2L-220ENST00000464800 FAM78BQ5VT40 261 aa10.3□□□□□ -0.76
MCF2L-220ENST00000464800 OR8G2PQ6IF36 304 aa10.3□□□□□ -0.76
MCF2L-220ENST00000464800 EBLN2Q6P2I7 272 aa10.3□□□□□ -0.76
MCF2L-220ENST00000464800 NOXA1Q86UR1 476 aa10.3□□□□□ -0.76
MCF2L-220ENST00000464800 MAGT1Q9H0U3 335 aa10.3□□□□□ -0.76
MCF2L-220ENST00000464800 GPR132Q9UNW8 380 aa10.3□□□□□ -0.76
MCF2L-220ENST00000464800 TMEM56-RWDD3S4R434 201 aa10.3□□□□□ -0.76
MCF2L-220ENST00000464800 F6UB75 175 aa10.29□□□□□ -0.76
MCF2L-220ENST00000464800 CTDSP2O14595 271 aa10.29□□□□□ -0.76
MCF2L-220ENST00000464800 PAX9P55771 341 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms