RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 GTSCR1Q86UQ5 136 aa12.83□□□□□ -0.36
VPS52-215ENST00000464425 TMEM61Q8N0U2 210 aa12.83□□□□□ -0.36
VPS52-215ENST00000464425 MBD2Q9UBB5 411 aa12.83□□□□□ -0.36
VPS52-215ENST00000464425 K7EMT4 169 aa12.82□□□□□ -0.36
VPS52-215ENST00000464425 CST7O76096 145 aa12.82□□□□□ -0.36
VPS52-215ENST00000464425 BAXQ07812 192 aa12.82□□□□□ -0.36
VPS52-215ENST00000464425 TOMM20LQ6UXN7 152 aa12.82□□□□□ -0.36
VPS52-215ENST00000464425 TMEM144Q7Z5S9 345 aa12.82□□□□□ -0.36
VPS52-215ENST00000464425 THAP8Q8NA92 274 aa12.82□□□□□ -0.36
VPS52-215ENST00000464425 OR2T35Q8NGX2 323 aa12.82□□□□□ -0.36
VPS52-215ENST00000464425 NPVFQ9HCQ7 196 aa12.82□□□□□ -0.36
VPS52-215ENST00000464425 IGHV3-49A0A0A0MS15 119 aa12.81□□□□□ -0.36
VPS52-215ENST00000464425 FRMD6-AS1P0C7T7 363 aa12.81□□□□□ -0.36
VPS52-215ENST00000464425 IGHV4-30-4P0DP06 118 aa12.81□□□□□ -0.36
VPS52-215ENST00000464425 CD81P60033 236 aa12.81□□□□□ -0.36
VPS52-215ENST00000464425 EWSR1Q01844 656 aaKnown RBP eCLIP12.81□□□□□ -0.36
VPS52-215ENST00000464425 NHLH2Q02577 135 aa12.81□□□□□ -0.36
VPS52-215ENST00000464425 SLC38A11Q08AI6 406 aa12.81□□□□□ -0.36
VPS52-215ENST00000464425 ATP6V1FQ16864 119 aa12.81□□□□□ -0.36
VPS52-215ENST00000464425 Q5BKY6 102 aa12.81□□□□□ -0.36
VPS52-215ENST00000464425 ZNF600Q6ZNG1 722 aa12.81□□□□□ -0.36
VPS52-215ENST00000464425 RBPMS2Q6ZRY4 209 aaKnown RBP12.81□□□□□ -0.36
VPS52-215ENST00000464425 PUS1Q9Y606 427 aaKnown RBP eCLIP12.81□□□□□ -0.36
VPS52-215ENST00000464425 IGKV1D-37A0A075B6S9 117 aa12.8□□□□□ -0.36
VPS52-215ENST00000464425 IGKV1OR2-108A0A075B7D4 117 aa12.8□□□□□ -0.36
VPS52-215ENST00000464425 ZFP92A6NM28 416 aa12.8□□□□□ -0.36
VPS52-215ENST00000464425 CD7P09564 240 aa12.8□□□□□ -0.36
VPS52-215ENST00000464425 RPL12P30050 165 aaKnown RBP12.8□□□□□ -0.36
VPS52-215ENST00000464425 VWC2Q2TAL6 325 aa12.8□□□□□ -0.36
VPS52-215ENST00000464425 TIGITQ495A1 244 aa12.8□□□□□ -0.36
VPS52-215ENST00000464425 TMEM217Q8N7C4 229 aa12.8□□□□□ -0.36
VPS52-215ENST00000464425 TRGV9Q99603 122 aa12.8□□□□□ -0.36
VPS52-215ENST00000464425 NEURL2Q9BR09 285 aa12.8□□□□□ -0.36
VPS52-215ENST00000464425 SMPXQ9UHP9 88 aa12.8□□□□□ -0.36
VPS52-215ENST00000464425 IGHV3OR16-13A0A075B7E8 117 aa12.79□□□□□ -0.36
VPS52-215ENST00000464425 IGHV3-74A0A0B4J1X5 117 aa12.79□□□□□ -0.36
VPS52-215ENST00000464425 IGHV7-4-1A0A0J9YVY3 117 aa12.79□□□□□ -0.36
VPS52-215ENST00000464425 FABP1P07148 127 aa12.79□□□□□ -0.36
VPS52-215ENST00000464425 AKR1C1Q04828 323 aa12.79□□□□□ -0.36
VPS52-215ENST00000464425 SBSPONQ8IVN8 264 aa12.79□□□□□ -0.36
VPS52-215ENST00000464425 Q8WTZ3 238 aa12.79□□□□□ -0.36
VPS52-215ENST00000464425 TUBA4BQ9H853 241 aa12.79□□□□□ -0.36
VPS52-215ENST00000464425 TRAV25A0A0B4J276 109 aa12.78□□□□□ -0.36
VPS52-215ENST00000464425 SMCO3A2RU48 225 aa12.78□□□□□ -0.36
VPS52-215ENST00000464425 G3V3Q6 166 aa12.78□□□□□ -0.36
VPS52-215ENST00000464425 CHEK1O14757 476 aa12.78□□□□□ -0.36
VPS52-215ENST00000464425 TOMM40O96008 361 aa12.78□□□□□ -0.36
VPS52-215ENST00000464425 RD3LP0DJH9 198 aa12.78□□□□□ -0.36
VPS52-215ENST00000464425 TEPPQ6URK8 271 aa12.78□□□□□ -0.36
VPS52-215ENST00000464425 LILRB2Q8N423 598 aa12.78□□□□□ -0.36
VPS52-215ENST00000464425 TMEM147Q9BVK8 224 aa12.78□□□□□ -0.36
VPS52-215ENST00000464425 RHPN1-AS1Q9BWJ2 59 aa12.78□□□□□ -0.36
VPS52-215ENST00000464425 ZFAND3Q9H8U3 227 aa12.78□□□□□ -0.36
VPS52-215ENST00000464425 UQCC1Q9NVA1 299 aa12.78□□□□□ -0.36
VPS52-215ENST00000464425 C19orf73Q9NVV2 129 aa12.78□□□□□ -0.36
VPS52-215ENST00000464425 HSPB11Q9Y547 144 aa12.78□□□□□ -0.36
VPS52-215ENST00000464425 IGHV3-66A0A0C4DH42 116 aa12.77□□□□□ -0.37
VPS52-215ENST00000464425 NHLRC4P0CG21 123 aaPredicted RBP12.77□□□□□ -0.37
VPS52-215ENST00000464425 NUP62P37198 522 aaPredicted RBP12.77□□□□□ -0.37
VPS52-215ENST00000464425 LAMTOR1Q6IAA8 161 aa12.77□□□□□ -0.37
VPS52-215ENST00000464425 ZNF546Q86UE3 836 aa12.77□□□□□ -0.37
VPS52-215ENST00000464425 DEFB125Q8N687 156 aa12.77□□□□□ -0.37
VPS52-215ENST00000464425 OR5C1Q8NGR4 320 aa12.77□□□□□ -0.37
VPS52-215ENST00000464425 AQP10Q96PS8 301 aa12.77□□□□□ -0.37
VPS52-215ENST00000464425 RNF2Q99496 336 aa12.77□□□□□ -0.37
VPS52-215ENST00000464425 GINS3Q9BRX5 216 aa12.77□□□□□ -0.37
VPS52-215ENST00000464425 WFDC10AQ9H1F0 79 aa12.77□□□□□ -0.37
VPS52-215ENST00000464425 hCG_2014768A0A024R1R8 64 aa12.76□□□□□ -0.37
VPS52-215ENST00000464425 OR11H12B2RN74 326 aa12.76□□□□□ -0.37
VPS52-215ENST00000464425 CFDP00746 253 aaPredicted RBP12.76□□□□□ -0.37
VPS52-215ENST00000464425 APOHP02749 345 aaPredicted RBP12.76□□□□□ -0.37
VPS52-215ENST00000464425 PSG1P11464 419 aa12.76□□□□□ -0.37
VPS52-215ENST00000464425 ZNF90Q03938 601 aa12.76□□□□□ -0.37
VPS52-215ENST00000464425 INO80EQ8NBZ0 244 aaPredicted RBP12.76□□□□□ -0.37
VPS52-215ENST00000464425 OR51G1Q8NGK1 321 aa12.76□□□□□ -0.37
VPS52-215ENST00000464425 ST6GAL2Q96JF0 529 aa12.76□□□□□ -0.37
VPS52-215ENST00000464425 TNFSF18Q9UNG2 199 aa12.76□□□□□ -0.37
VPS52-215ENST00000464425 WDR83OSQ9Y284 106 aa12.76□□□□□ -0.37
VPS52-215ENST00000464425 COL7A1Q02388 2944 aa12.75□□□□□ -0.37
VPS52-215ENST00000464425 A0A1B0GVG6 124 aa12.75□□□□□ -0.37
VPS52-215ENST00000464425 A8MZ25 164 aa12.75□□□□□ -0.37
VPS52-215ENST00000464425 TSPAN4O14817 238 aa12.75□□□□□ -0.37
VPS52-215ENST00000464425 SELENOTP62341 195 aa12.75□□□□□ -0.37
VPS52-215ENST00000464425 RAB31Q13636 194 aa12.75□□□□□ -0.37
VPS52-215ENST00000464425 ST8SIA2Q92186 375 aa12.75□□□□□ -0.37
VPS52-215ENST00000464425 HUWE1Q7Z6Z7 4374 aaKnown RBP12.74□□□□□ -0.37
VPS52-215ENST00000464425 IGKV3-7A0A075B6H7 116 aa12.74□□□□□ -0.37
VPS52-215ENST00000464425 FXYD6-FXYD2A0A087WZ82 144 aa12.74□□□□□ -0.37
VPS52-215ENST00000464425 MPDU1O75352 247 aa12.74□□□□□ -0.37
VPS52-215ENST00000464425 DFFBO76075 338 aa12.74□□□□□ -0.37
VPS52-215ENST00000464425 NPPCP23582 126 aa12.74□□□□□ -0.37
VPS52-215ENST00000464425 CYP2G1PQ6ZSU1 146 aa12.74□□□□□ -0.37
VPS52-215ENST00000464425 TCTE3Q8IZS6 198 aa12.74□□□□□ -0.37
VPS52-215ENST00000464425 METTL26Q96S19 204 aa12.74□□□□□ -0.37
VPS52-215ENST00000464425 ATP5SQ99766 215 aa12.74□□□□□ -0.37
VPS52-215ENST00000464425 SPAG8Q99932 426 aaPredicted RBP12.74□□□□□ -0.37
VPS52-215ENST00000464425 IL4P05112 153 aa12.73□□□□□ -0.37
VPS52-215ENST00000464425 TFPI2P48307 235 aa12.73□□□□□ -0.37
VPS52-215ENST00000464425 BPIFCQ8NFQ6 507 aa12.73□□□□□ -0.37
VPS52-215ENST00000464425 SRD5A3Q9H8P0 318 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms