RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 CIARTQ8N365 385 aaPredicted RBP11.52□□□□□ -0.57
COL5A1-205ENST00000464187 EAF1Q96JC9 268 aaPredicted RBP11.52□□□□□ -0.57
COL5A1-205ENST00000464187 UHRF2Q96PU4 802 aa11.52□□□□□ -0.57
COL5A1-205ENST00000464187 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
COL5A1-205ENST00000464187 A0A1W2PPQ1 181 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 TCRBV4S1A1TA0A5B7 111 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 GGCTO75223 188 aaKnown RBP11.51□□□□□ -0.57
COL5A1-205ENST00000464187 C8orf88P0DMB2 117 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 ZNF90Q03938 601 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 MMDQ15546 238 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 FBLN7Q53RD9 439 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 MORN5Q5VZ52 161 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 FAM167A-AS1Q96KT0 104 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 SLC25A33Q9BSK2 321 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 SLC25A2Q9BXI2 301 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 CR1P17927 2039 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 PCP4L1A6NKN8 68 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 IFITM10A6NMD0 228 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 APELAP0DMC3 54 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 MRPL41Q8IXM3 137 aaKnown RBP11.51□□□□□ -0.57
COL5A1-205ENST00000464187 OR2T10Q8NGZ9 312 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 SFRP2Q96HF1 295 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 RNF2Q99496 336 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 TCEAL7Q9BRU2 100 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 FBXL15Q9H469 300 aa11.51□□□□□ -0.57
COL5A1-205ENST00000464187 A0A0U1RQK1 487 aa11.5□□□□□ -0.57
COL5A1-205ENST00000464187 MDFIC2A0A1B0GVS7 189 aa11.5□□□□□ -0.57
COL5A1-205ENST00000464187 TEX22C9J3V5 150 aa11.5□□□□□ -0.57
COL5A1-205ENST00000464187 CRYGCP07315 174 aa11.5□□□□□ -0.57
COL5A1-205ENST00000464187 OR10J4P0C629 311 aa11.5□□□□□ -0.57
COL5A1-205ENST00000464187 HNF1AP20823 631 aa11.5□□□□□ -0.57
COL5A1-205ENST00000464187 BRS3P32247 399 aa11.5□□□□□ -0.57
COL5A1-205ENST00000464187 CDX1P47902 265 aaPredicted RBP11.5□□□□□ -0.57
COL5A1-205ENST00000464187 EBI3Q14213 229 aa11.5□□□□□ -0.57
COL5A1-205ENST00000464187 CYB5R2Q6BCY4 276 aa11.5□□□□□ -0.57
COL5A1-205ENST00000464187 PPP1R27Q86WC6 154 aa11.5□□□□□ -0.57
COL5A1-205ENST00000464187 OR4X1Q8NH49 305 aa11.5□□□□□ -0.57
COL5A1-205ENST00000464187 OCC1Q8TAD7 63 aa11.5□□□□□ -0.57
COL5A1-205ENST00000464187 MISP3Q96FF7 219 aa11.5□□□□□ -0.57
COL5A1-205ENST00000464187 DNAJC4Q9NNZ3 241 aa11.5□□□□□ -0.57
COL5A1-205ENST00000464187 AKAP9Q99996 3911 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 TRAV5A0A0B4J249 113 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 GGTLC3B5MD39 225 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 C9JCJ5 164 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 K7EN84 100 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 PPP1R2P9O14990 202 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 NBR2O15453 112 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 COX7A2P2O60397 106 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 FAM106CPP0CH98 169 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 FAM120AOSQ5T036 256 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 PATE2Q6UY27 113 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 ITPR3Q14573 2671 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 PPP5D1E7EU14 171 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 SMAD7O15105 426 aaKnown RBP11.49□□□□□ -0.57
COL5A1-205ENST00000464187 SELENOTP62341 195 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 PLGLAQ15195 96 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 ETFRF1Q6IPR1 90 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 TEX38Q6PEX7 206 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 KCNIP4Q6PIL6 250 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 NPBQ8NG41 125 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 OR1L4Q8NGR5 311 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 PFDN5Q99471 154 aa11.49□□□□□ -0.57
COL5A1-205ENST00000464187 SOX21Q9Y651 276 aaPredicted RBP11.49□□□□□ -0.57
COL5A1-205ENST00000464187 ABCA1O95477 2261 aa11.48□□□□□ -0.57
COL5A1-205ENST00000464187 NDUFA3O95167 84 aa11.48□□□□□ -0.57
COL5A1-205ENST00000464187 TYMSP04818 313 aa11.48□□□□□ -0.57
COL5A1-205ENST00000464187 S100A9P06702 114 aaKnown RBP11.48□□□□□ -0.57
COL5A1-205ENST00000464187 TMEM11P17152 192 aa11.48□□□□□ -0.57
COL5A1-205ENST00000464187 FAM3BP58499 235 aaPredicted RBP11.48□□□□□ -0.57
COL5A1-205ENST00000464187 BPIFB3P59826 476 aa11.48□□□□□ -0.57
COL5A1-205ENST00000464187 GFI1BQ5VTD9 330 aa11.48□□□□□ -0.57
COL5A1-205ENST00000464187 C10orf113Q5VZT2 155 aa11.48□□□□□ -0.57
COL5A1-205ENST00000464187 Q8N6K4 173 aa11.48□□□□□ -0.57
COL5A1-205ENST00000464187 OR5AU1Q8NGC0 362 aa11.48□□□□□ -0.57
COL5A1-205ENST00000464187 OR1P1Q8NH06 330 aa11.48□□□□□ -0.57
COL5A1-205ENST00000464187 IMMP2LQ96T52 175 aa11.48□□□□□ -0.57
COL5A1-205ENST00000464187 MEGF9Q9H1U4 602 aa11.48□□□□□ -0.57
COL5A1-205ENST00000464187 ZNF355PQ9NSJ1 428 aa11.48□□□□□ -0.57
COL5A1-205ENST00000464187 A0A1W2PRE2 83 aa11.47□□□□□ -0.57
COL5A1-205ENST00000464187 NCBP2LA6PVI3 153 aaKnown RBP11.47□□□□□ -0.57
COL5A1-205ENST00000464187 FCN1O00602 326 aa11.47□□□□□ -0.57
COL5A1-205ENST00000464187 CRYBB3P26998 211 aa11.47□□□□□ -0.57
COL5A1-205ENST00000464187 UBE2L3P68036 154 aaKnown RBP11.47□□□□□ -0.57
COL5A1-205ENST00000464187 HIST3H2BBQ8N257 126 aa11.47□□□□□ -0.57
COL5A1-205ENST00000464187 SRSF12Q8WXF0 261 aaKnown RBP11.47□□□□□ -0.57
COL5A1-205ENST00000464187 TNFRSF19Q9NS68 423 aa11.47□□□□□ -0.57
COL5A1-205ENST00000464187 DMRT1Q9Y5R6 373 aa11.47□□□□□ -0.57
COL5A1-205ENST00000464187 F11RQ9Y624 299 aaKnown RBP11.47□□□□□ -0.57
COL5A1-205ENST00000464187 LY96Q9Y6Y9 160 aa11.47□□□□□ -0.57
COL5A1-205ENST00000464187 NOTCH2Q04721 2471 aa11.47□□□□□ -0.57
COL5A1-205ENST00000464187 ELOA3CA0A087WX78 387 aaPredicted RBP11.46□□□□□ -0.57
COL5A1-205ENST00000464187 IGHV3-21A0A0B4J1V1 117 aa11.46□□□□□ -0.57
COL5A1-205ENST00000464187 ACTL10Q5JWF8 245 aa11.46□□□□□ -0.57
COL5A1-205ENST00000464187 OR10G8Q8NGN5 311 aa11.46□□□□□ -0.57
COL5A1-205ENST00000464187 TRGV9Q99603 122 aa11.46□□□□□ -0.57
COL5A1-205ENST00000464187 CSPG4Q6UVK1 2322 aa11.46□□□□□ -0.57
COL5A1-205ENST00000464187 PYYP10082 97 aa11.46□□□□□ -0.58
COL5A1-205ENST00000464187 FOXL1Q12952 345 aa11.46□□□□□ -0.58
COL5A1-205ENST00000464187 C5orf64Q2M2E5 130 aa11.46□□□□□ -0.58
COL5A1-205ENST00000464187 CENPWQ5EE01 88 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms