RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 GLMPQ8WWB7 406 aa9.56□□□□□ -0.88
XRN1-203ENST00000463916 SLC35E1Q96K37 410 aa9.56□□□□□ -0.88
XRN1-203ENST00000463916 CIB3Q96Q77 187 aaPredicted RBP9.56□□□□□ -0.88
XRN1-203ENST00000463916 LYSTQ99698 3801 aa9.56□□□□□ -0.88
XRN1-203ENST00000463916 CCDC32Q9BV29 185 aa9.56□□□□□ -0.88
XRN1-203ENST00000463916 TBC1D24Q9ULP9 559 aa9.56□□□□□ -0.88
XRN1-203ENST00000463916 K7EQG2 157 aa9.55□□□□□ -0.88
XRN1-203ENST00000463916 DEFB131AP59861 70 aa9.55□□□□□ -0.88
XRN1-203ENST00000463916 DEFB135Q30KP9 77 aa9.55□□□□□ -0.88
XRN1-203ENST00000463916 NUDT15Q9NV35 164 aa9.55□□□□□ -0.88
XRN1-203ENST00000463916 BUB3O43684 328 aa9.55□□□□□ -0.88
XRN1-203ENST00000463916 IFNA21P01568 189 aa9.55□□□□□ -0.88
XRN1-203ENST00000463916 NKX2-1P43699 371 aaPredicted RBP9.55□□□□□ -0.88
XRN1-203ENST00000463916 APOC4P55056 127 aa9.55□□□□□ -0.88
XRN1-203ENST00000463916 PAX9P55771 341 aa9.55□□□□□ -0.88
XRN1-203ENST00000463916 Q6ZWC4 215 aa9.55□□□□□ -0.88
XRN1-203ENST00000463916 STPG3Q8N7X2 389 aa9.55□□□□□ -0.88
XRN1-203ENST00000463916 RNF125Q96EQ8 232 aa9.55□□□□□ -0.88
XRN1-203ENST00000463916 TRAV2A0A0B4J234 112 aa9.54□□□□□ -0.88
XRN1-203ENST00000463916 KIR2DL5BA0A0G2JN68 375 aa9.54□□□□□ -0.88
XRN1-203ENST00000463916 KIR2DL5BA0A0G2JPC4 375 aa9.54□□□□□ -0.88
XRN1-203ENST00000463916 SSSCA1O60232 199 aa9.54□□□□□ -0.88
XRN1-203ENST00000463916 CMC4P56277 68 aaPredicted RBP9.54□□□□□ -0.88
XRN1-203ENST00000463916 OR2F1Q13607 317 aa9.54□□□□□ -0.88
XRN1-203ENST00000463916 IAH1Q2TAA2 248 aaPredicted RBP9.54□□□□□ -0.88
XRN1-203ENST00000463916 KIR2DL5AQ8N109 375 aa9.54□□□□□ -0.88
XRN1-203ENST00000463916 KIR2DL5BQ8NHK3 375 aa9.54□□□□□ -0.88
XRN1-203ENST00000463916 NARS2Q96I59 477 aaKnown RBP9.54□□□□□ -0.88
XRN1-203ENST00000463916 SEC22CQ9BRL7 303 aa9.54□□□□□ -0.88
XRN1-203ENST00000463916 PBDC1Q9BVG4 233 aa9.54□□□□□ -0.88
XRN1-203ENST00000463916 CCSO14618 274 aa9.54□□□□□ -0.88
XRN1-203ENST00000463916 RPP30P78346 268 aaKnown RBP9.54□□□□□ -0.88
XRN1-203ENST00000463916 TMEM182Q6ZP80 229 aaPredicted RBP9.54□□□□□ -0.88
XRN1-203ENST00000463916 THAP8Q8NA92 274 aa9.54□□□□□ -0.88
XRN1-203ENST00000463916 GRAMD2BQ96HH9 432 aa9.54□□□□□ -0.88
XRN1-203ENST00000463916 GSKIPQ9P0R6 139 aa9.54□□□□□ -0.88
XRN1-203ENST00000463916 STRAPQ9Y3F4 350 aaKnown RBP9.54□□□□□ -0.88
XRN1-203ENST00000463916 AGRNO00468 2067 aa9.53□□□□□ -0.88
XRN1-203ENST00000463916 PMS2P5A8MQ11 134 aa9.53□□□□□ -0.88
XRN1-203ENST00000463916 UBE2CO00762 179 aa9.53□□□□□ -0.88
XRN1-203ENST00000463916 SPRY2O43597 315 aa9.53□□□□□ -0.88
XRN1-203ENST00000463916 CCNKO75909 580 aa9.53□□□□□ -0.88
XRN1-203ENST00000463916 ZNF688P0C7X2 276 aa9.53□□□□□ -0.88
XRN1-203ENST00000463916 IFITM3Q01628 133 aa9.53□□□□□ -0.88
XRN1-203ENST00000463916 GSG1LQ6UXU4 331 aa9.53□□□□□ -0.88
XRN1-203ENST00000463916 ZBTB8BQ8NAP8 495 aaPredicted RBP9.53□□□□□ -0.88
XRN1-203ENST00000463916 S100ZQ8WXG8 99 aa9.53□□□□□ -0.88
XRN1-203ENST00000463916 TRGV9Q99603 122 aa9.53□□□□□ -0.88
XRN1-203ENST00000463916 PSENENQ9NZ42 101 aa9.53□□□□□ -0.88
XRN1-203ENST00000463916 SNRPGP15A8MWD9 76 aa9.52□□□□□ -0.88
XRN1-203ENST00000463916 SCGB1D2O95969 90 aa9.52□□□□□ -0.88
XRN1-203ENST00000463916 GATA2P23769 480 aaPredicted RBP9.52□□□□□ -0.88
XRN1-203ENST00000463916 EWSR1Q01844 656 aaKnown RBP eCLIP9.52□□□□□ -0.88
XRN1-203ENST00000463916 ACOT7LQ6ZUV0 252 aa9.52□□□□□ -0.88
XRN1-203ENST00000463916 RNF183Q96D59 192 aa9.52□□□□□ -0.88
XRN1-203ENST00000463916 SMIM8Q96KF7 97 aa9.52□□□□□ -0.88
XRN1-203ENST00000463916 CSTL1Q9H114 145 aa9.52□□□□□ -0.88
XRN1-203ENST00000463916 TP53TG1Q9Y2A0 90 aa9.52□□□□□ -0.88
XRN1-203ENST00000463916 RCL1Q9Y2P8 373 aaKnown RBP9.52□□□□□ -0.88
XRN1-203ENST00000463916 HELTA6NFD8 242 aa9.52□□□□□ -0.89
XRN1-203ENST00000463916 MBPP02686 304 aaPredicted RBP9.52□□□□□ -0.89
XRN1-203ENST00000463916 H2AFB2P0C5Z0 115 aa9.52□□□□□ -0.89
XRN1-203ENST00000463916 EIF2B2P49770 351 aaKnown RBP9.52□□□□□ -0.89
XRN1-203ENST00000463916 LYZP61626 148 aa9.52□□□□□ -0.89
XRN1-203ENST00000463916 ZNF431Q8TF32 576 aaPredicted RBP9.52□□□□□ -0.89
XRN1-203ENST00000463916 FAM240BA0A1B0GVZ2 78 aa9.51□□□□□ -0.89
XRN1-203ENST00000463916 KNCNA6PVL3 124 aa9.51□□□□□ -0.89
XRN1-203ENST00000463916 ASAH1Q13510 395 aa9.51□□□□□ -0.89
XRN1-203ENST00000463916 OR8G2PQ6IF36 304 aa9.51□□□□□ -0.89
XRN1-203ENST00000463916 SIGLEC15Q6ZMC9 328 aa9.51□□□□□ -0.89
XRN1-203ENST00000463916 PTTG2Q9NZH5 202 aa9.51□□□□□ -0.89
XRN1-203ENST00000463916 DYNC2H1Q8NCM8 4307 aaKnown RBP9.51□□□□□ -0.89
XRN1-203ENST00000463916 A0A0J9YWU9 116 aa9.51□□□□□ -0.89
XRN1-203ENST00000463916 METTL15P1P0C7V9 234 aa9.51□□□□□ -0.89
XRN1-203ENST00000463916 AP2S1P53680 142 aaPredicted RBP9.51□□□□□ -0.89
XRN1-203ENST00000463916 TMEM14EPQ6UXP3 125 aa9.51□□□□□ -0.89
XRN1-203ENST00000463916 NRN1Q9NPD7 142 aa9.51□□□□□ -0.89
XRN1-203ENST00000463916 C7orf66A4D0T2 115 aa9.5□□□□□ -0.89
XRN1-203ENST00000463916 UPK1BO75841 260 aa9.5□□□□□ -0.89
XRN1-203ENST00000463916 GIG44P09565 113 aaPredicted RBP9.5□□□□□ -0.89
XRN1-203ENST00000463916 WDR12Q9GZL7 423 aaKnown RBP9.5□□□□□ -0.89
XRN1-203ENST00000463916 FAM25EA8MYX2 175 aa9.49□□□□□ -0.89
XRN1-203ENST00000463916 FABP1P07148 127 aa9.49□□□□□ -0.89
XRN1-203ENST00000463916 RRAS2P62070 204 aaPredicted RBP9.49□□□□□ -0.89
XRN1-203ENST00000463916 AKR1C1Q04828 323 aa9.49□□□□□ -0.89
XRN1-203ENST00000463916 ARL16Q0P5N6 197 aa9.49□□□□□ -0.89
XRN1-203ENST00000463916 ZNF846Q147U1 533 aa9.49□□□□□ -0.89
XRN1-203ENST00000463916 PSMG4Q5JS54 123 aa9.49□□□□□ -0.89
XRN1-203ENST00000463916 C12orf45Q8N5I9 185 aaPredicted RBP9.49□□□□□ -0.89
XRN1-203ENST00000463916 RAB40CQ96S21 281 aa9.49□□□□□ -0.89
XRN1-203ENST00000463916 CA1P00915 261 aaPredicted RBP9.49□□□□□ -0.89
XRN1-203ENST00000463916 ACTL10Q5JWF8 245 aa9.49□□□□□ -0.89
XRN1-203ENST00000463916 MZT2BQ6NZ67 158 aa9.49□□□□□ -0.89
XRN1-203ENST00000463916 TMEM144Q7Z5S9 345 aa9.49□□□□□ -0.89
XRN1-203ENST00000463916 TRPT1Q86TN4 253 aaKnown RBP9.49□□□□□ -0.89
XRN1-203ENST00000463916 STHQ8IWL8 128 aa9.49□□□□□ -0.89
XRN1-203ENST00000463916 SACSQ9NZJ4 4579 aa9.49□□□□□ -0.89
XRN1-203ENST00000463916 SMCO3A2RU48 225 aa9.48□□□□□ -0.89
XRN1-203ENST00000463916 C5orf51A6NDU8 294 aa9.47□□□□□ -0.89
XRN1-203ENST00000463916 TSC22D2O75157 780 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms